RNA–Protein interactions for RNA: ENST00000396832.5

CSNK1E-203, Transcript of casein kinase 1 epsilon, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CSNK1E, Length 2,791 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1E-203ENST00000396832 FAM237AA0A1B0GTK4 181 aa27.28■■□□□ 1.96
CSNK1E-203ENST00000396832 RHOXF2BP0C7M4 288 aa27.28■■□□□ 1.96
CSNK1E-203ENST00000396832 ZNF18P17022 549 aa27.28■■□□□ 1.96
CSNK1E-203ENST00000396832 RHOXF2Q9BQY4 288 aa27.28■■□□□ 1.96
CSNK1E-203ENST00000396832 TACC3Q9Y6A5 838 aa27.28■■□□□ 1.96
CSNK1E-203ENST00000396832 KIF5CO60282 957 aa27.28■■□□□ 1.96
CSNK1E-203ENST00000396832 TOB1P50616 345 aaPredicted RBP27.28■■□□□ 1.96
CSNK1E-203ENST00000396832 SMYD4Q8IYR2 804 aaPredicted RBP27.28■■□□□ 1.96
CSNK1E-203ENST00000396832 YY1AP1Q9H869 796 aa27.28■■□□□ 1.96
CSNK1E-203ENST00000396832 RAI14Q9P0K7 980 aa27.28■■□□□ 1.96
CSNK1E-203ENST00000396832 ZSWIM5Q9P217 1185 aa27.28■■□□□ 1.96
CSNK1E-203ENST00000396832 IGDCC4Q8TDY8 1250 aa27.27■■□□□ 1.96
CSNK1E-203ENST00000396832 NUP133Q8WUM0 1156 aa27.27■■□□□ 1.96
CSNK1E-203ENST00000396832 ADGRG1Q9Y653 693 aa27.27■■□□□ 1.96
CSNK1E-203ENST00000396832 TEX33O43247 280 aa27.27■■□□□ 1.96
CSNK1E-203ENST00000396832 AFMP43652 599 aa27.27■■□□□ 1.96
CSNK1E-203ENST00000396832 SSRP1Q08945 709 aaKnown RBP27.27■■□□□ 1.96
CSNK1E-203ENST00000396832 HSP90B2PQ58FF3 399 aa27.27■■□□□ 1.96
CSNK1E-203ENST00000396832 NOSTRINQ8IVI9 506 aa27.27■■□□□ 1.96
CSNK1E-203ENST00000396832 MED15Q96RN5 788 aa27.27■■□□□ 1.96
CSNK1E-203ENST00000396832 MKRN1Q9UHC7 482 aaKnown RBP27.27■■□□□ 1.96
CSNK1E-203ENST00000396832 NUP188Q5SRE5 1749 aa27.27■■□□□ 1.96
CSNK1E-203ENST00000396832 ECM29Q5VYK3 1845 aa27.27■■□□□ 1.96
CSNK1E-203ENST00000396832 TCIRG1Q13488 830 aa27.26■■□□□ 1.96
CSNK1E-203ENST00000396832 CASP8Q14790 479 aa27.26■■□□□ 1.96
CSNK1E-203ENST00000396832 ZNF569Q5MCW4 686 aa27.26■■□□□ 1.96
CSNK1E-203ENST00000396832 OXER1Q8TDS5 423 aa27.26■■□□□ 1.96
CSNK1E-203ENST00000396832 JRKLQ9Y4A0 524 aa27.26■■□□□ 1.96
CSNK1E-203ENST00000396832 FAM205CA6NFA0 338 aa27.26■■□□□ 1.95
CSNK1E-203ENST00000396832 AKR1B15C9JRZ8 316 aaPredicted RBP27.26■■□□□ 1.95
CSNK1E-203ENST00000396832 PDE6AP16499 860 aa27.26■■□□□ 1.95
CSNK1E-203ENST00000396832 VSNL1P62760 191 aa27.26■■□□□ 1.95
CSNK1E-203ENST00000396832 KIF4BQ2VIQ3 1234 aa27.26■■□□□ 1.95
CSNK1E-203ENST00000396832 RIC1Q4ADV7 1423 aa27.26■■□□□ 1.95
CSNK1E-203ENST00000396832 LRRC31Q6UY01 552 aa27.26■■□□□ 1.95
CSNK1E-203ENST00000396832 RAD9BQ6WBX8 426 aa27.26■■□□□ 1.95
CSNK1E-203ENST00000396832 ZCRB1Q8TBF4 217 aaKnown RBP27.26■■□□□ 1.95
CSNK1E-203ENST00000396832 TEX13AQ9BXU3 409 aaPredicted RBP27.26■■□□□ 1.95
CSNK1E-203ENST00000396832 ARMT1Q9H993 441 aa27.26■■□□□ 1.95
CSNK1E-203ENST00000396832 MYH7P12883 1935 aa27.26■■□□□ 1.95
CSNK1E-203ENST00000396832 ANKRD65E5RJM6 399 aa27.26■■□□□ 1.95
CSNK1E-203ENST00000396832 PRKAB2O43741 272 aa27.26■■□□□ 1.95
CSNK1E-203ENST00000396832 HLFQ16534 295 aa27.25■■□□□ 1.95
CSNK1E-203ENST00000396832 EPB41L4AQ9HCS5 686 aaPredicted RBP27.25■■□□□ 1.95
CSNK1E-203ENST00000396832 LAMB4A4D0S4 1761 aa27.25■■□□□ 1.95
CSNK1E-203ENST00000396832 MDM2Q00987 491 aaPredicted RBP27.25■■□□□ 1.95
CSNK1E-203ENST00000396832 FAM71BQ8TC56 605 aa27.25■■□□□ 1.95
CSNK1E-203ENST00000396832 STAMQ92783 540 aa27.25■■□□□ 1.95
CSNK1E-203ENST00000396832 ISCA1Q9BUE6 129 aa27.25■■□□□ 1.95
CSNK1E-203ENST00000396832 NR1I3Q14994 352 aa27.24■■□□□ 1.95
CSNK1E-203ENST00000396832 PANX2Q96RD6 677 aa27.24■■□□□ 1.95
CSNK1E-203ENST00000396832 NAPBQ9H115 298 aa27.24■■□□□ 1.95
CSNK1E-203ENST00000396832 MBD4O95243 580 aa27.24■■□□□ 1.95
CSNK1E-203ENST00000396832 ENOX1Q8TC92 643 aaKnown RBP27.24■■□□□ 1.95
CSNK1E-203ENST00000396832 SPEF2Q9C093 1822 aa27.24■■□□□ 1.95
CSNK1E-203ENST00000396832 ATF3P18847 181 aa27.23■■□□□ 1.95
CSNK1E-203ENST00000396832 MAGEB6Q8N7X4 407 aa27.23■■□□□ 1.95
CSNK1E-203ENST00000396832 STRN4Q9NRL3 753 aa27.23■■□□□ 1.95
CSNK1E-203ENST00000396832 CORO7P57737 925 aa27.23■■□□□ 1.95
CSNK1E-203ENST00000396832 DNAJC10Q8IXB1 793 aa27.23■■□□□ 1.95
CSNK1E-203ENST00000396832 LMTK3Q96Q04 1460 aa27.23■■□□□ 1.95
CSNK1E-203ENST00000396832 CTAGE9A4FU28 777 aa27.22■■□□□ 1.95
CSNK1E-203ENST00000396832 TUBB4BP68371 445 aa27.22■■□□□ 1.95
CSNK1E-203ENST00000396832 NUTM2AQ8IVF1 878 aaPredicted RBP27.22■■□□□ 1.95
CSNK1E-203ENST00000396832 TMEM94Q12767 1356 aa27.22■■□□□ 1.95
CSNK1E-203ENST00000396832 SMIM22K7EJ46 135 aa27.22■■□□□ 1.95
CSNK1E-203ENST00000396832 PPM1EQ8WY54 764 aa27.22■■□□□ 1.95
CSNK1E-203ENST00000396832 RIPOR2Q9Y4F9 1068 aa27.22■■□□□ 1.95
CSNK1E-203ENST00000396832 ZNF142P52746 1687 aaPredicted RBP27.22■■□□□ 1.95
CSNK1E-203ENST00000396832 TUBB2AQ13885 445 aa27.21■■□□□ 1.95
CSNK1E-203ENST00000396832 MLKLQ8NB16 471 aa27.21■■□□□ 1.95
CSNK1E-203ENST00000396832 TUBB2BQ9BVA1 445 aa27.21■■□□□ 1.95
CSNK1E-203ENST00000396832 PLEKHA4Q9H4M7 779 aa27.21■■□□□ 1.95
CSNK1E-203ENST00000396832 CABP5Q9NP86 173 aa27.21■■□□□ 1.95
CSNK1E-203ENST00000396832 EIF4ENIF1Q9NRA8 985 aaKnown RBP27.21■■□□□ 1.95
CSNK1E-203ENST00000396832 HOOK1Q9UJC3 728 aaKnown RBP27.21■■□□□ 1.95
CSNK1E-203ENST00000396832 FBXO2Q9UK22 296 aaPredicted RBP27.21■■□□□ 1.95
CSNK1E-203ENST00000396832 GBP3Q9H0R5 595 aa27.21■■□□□ 1.95
CSNK1E-203ENST00000396832 CSRNP2Q9H175 543 aa27.21■■□□□ 1.95
CSNK1E-203ENST00000396832 FAM204AQ9H8W3 233 aa27.21■■□□□ 1.95
CSNK1E-203ENST00000396832 AKAP11Q9UKA4 1901 aa27.21■■□□□ 1.95
CSNK1E-203ENST00000396832 RBL2Q08999 1139 aa27.2■■□□□ 1.95
CSNK1E-203ENST00000396832 SAFBQ15424 915 aaKnown RBP eCLIP27.2■■□□□ 1.95
CSNK1E-203ENST00000396832 MIGA1Q8NAN2 632 aa27.2■■□□□ 1.95
CSNK1E-203ENST00000396832 BAZ2BQ9UIF8 2168 aaKnown RBP27.2■■□□□ 1.95
CSNK1E-203ENST00000396832 DDX60Q8IY21 1712 aaKnown RBP27.2■■□□□ 1.95
CSNK1E-203ENST00000396832 LRRIQ3A6PVS8 624 aaPredicted RBP27.2■■□□□ 1.94
CSNK1E-203ENST00000396832 MMP1P03956 469 aa27.2■■□□□ 1.94
CSNK1E-203ENST00000396832 KIF6Q6ZMV9 814 aa27.2■■□□□ 1.94
CSNK1E-203ENST00000396832 TTLL11Q8NHH1 800 aa27.2■■□□□ 1.94
CSNK1E-203ENST00000396832 GEMIN8Q9NWZ8 242 aaKnown RBP27.2■■□□□ 1.94
CSNK1E-203ENST00000396832 TBC1D2BQ9UPU7 963 aa27.2■■□□□ 1.94
CSNK1E-203ENST00000396832 GUCY2CP25092 1073 aa27.2■■□□□ 1.94
CSNK1E-203ENST00000396832 PPFIBP1Q86W92 1011 aa27.2■■□□□ 1.94
CSNK1E-203ENST00000396832 SLC35F6Q8N357 371 aa27.2■■□□□ 1.94
CSNK1E-203ENST00000396832 EPSTI1Q96J88 318 aa27.2■■□□□ 1.94
CSNK1E-203ENST00000396832 STRBPQ96SI9 672 aaKnown RBP27.2■■□□□ 1.94
CSNK1E-203ENST00000396832 BRMS1Q9HCU9 246 aa27.2■■□□□ 1.94
CSNK1E-203ENST00000396832 DACH1Q9UI36 760 aa27.2■■□□□ 1.94
CSNK1E-203ENST00000396832 ASAP1Q9ULH1 1129 aa27.2■■□□□ 1.94
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms