RNA–Protein interactions for RNA: ENST00000396526.7

SNX6-202, Transcript of sorting nexin 6, humanhuman

TSL 1 (best) BASIC

Gene SNX6, Length 3,398 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX6-202ENST00000396526 GOLPH3LQ9H4A5 285 aa18.61■□□□□ 0.57
SNX6-202ENST00000396526 KAT14Q9H8E8 782 aa18.61■□□□□ 0.57
SNX6-202ENST00000396526 PRPF3O43395 683 aaKnown RBP18.61■□□□□ 0.57
SNX6-202ENST00000396526 IL1R1P14778 569 aa18.61■□□□□ 0.57
SNX6-202ENST00000396526 CBX8Q9HC52 389 aa18.61■□□□□ 0.57
SNX6-202ENST00000396526 HOOK1Q9UJC3 728 aaKnown RBP18.61■□□□□ 0.57
SNX6-202ENST00000396526 MARCKSP29966 332 aaPredicted RBP18.61■□□□□ 0.57
SNX6-202ENST00000396526 DDR1Q08345 913 aa18.61■□□□□ 0.57
SNX6-202ENST00000396526 C12orf60Q5U649 245 aa18.61■□□□□ 0.57
SNX6-202ENST00000396526 CCDC34Q96HJ3 373 aa18.61■□□□□ 0.57
SNX6-202ENST00000396526 ZC3H12CQ9C0D7 883 aaKnown RBP18.61■□□□□ 0.57
SNX6-202ENST00000396526 DNAJC25Q9H1X3 360 aa18.61■□□□□ 0.57
SNX6-202ENST00000396526 MROH7-TTC4A0A0A0MT08 1334 aa18.61■□□□□ 0.57
SNX6-202ENST00000396526 C4AP0C0L4 1744 aa18.6■□□□□ 0.57
SNX6-202ENST00000396526 BTBD18B2RXH4 712 aa18.6■□□□□ 0.57
SNX6-202ENST00000396526 PPEF1O14829 653 aaPredicted RBP18.6■□□□□ 0.57
SNX6-202ENST00000396526 CUTAO60888 179 aa18.6■□□□□ 0.57
SNX6-202ENST00000396526 TBC1D16Q8TBP0 767 aa18.6■□□□□ 0.57
SNX6-202ENST00000396526 PARP3Q9Y6F1 533 aa18.6■□□□□ 0.57
SNX6-202ENST00000396526 A0A1B0GUL6 1792 aa18.6■□□□□ 0.57
SNX6-202ENST00000396526 PDE6BP35913 854 aa18.6■□□□□ 0.57
SNX6-202ENST00000396526 GNAQP50148 359 aa18.6■□□□□ 0.57
SNX6-202ENST00000396526 MFSD14BQ5SR56 506 aa18.6■□□□□ 0.57
SNX6-202ENST00000396526 EIF4ENIF1Q9NRA8 985 aaKnown RBP18.6■□□□□ 0.57
SNX6-202ENST00000396526 SYKP43405 635 aa18.59■□□□□ 0.57
SNX6-202ENST00000396526 NDUFA8P51970 172 aa18.59■□□□□ 0.57
SNX6-202ENST00000396526 FAM47AQ5JRC9 791 aa18.59■□□□□ 0.57
SNX6-202ENST00000396526 NBPF11Q86T75 865 aa18.59■□□□□ 0.57
SNX6-202ENST00000396526 DGKHQ86XP1 1220 aa18.59■□□□□ 0.57
SNX6-202ENST00000396526 KCNJ14Q9UNX9 436 aa18.59■□□□□ 0.57
SNX6-202ENST00000396526 V9GY48 417 aaPredicted RBP18.59■□□□□ 0.57
SNX6-202ENST00000396526 KLRG2A4D1S0 409 aaPredicted RBP18.59■□□□□ 0.57
SNX6-202ENST00000396526 ZNF202O95125 648 aa18.59■□□□□ 0.57
SNX6-202ENST00000396526 USP17L8P0C7I0 530 aa18.59■□□□□ 0.57
SNX6-202ENST00000396526 TFAP4Q01664 338 aa18.59■□□□□ 0.57
SNX6-202ENST00000396526 DIXDC1Q155Q3 683 aa18.59■□□□□ 0.57
SNX6-202ENST00000396526 LUZP1Q86V48 1076 aa18.59■□□□□ 0.57
SNX6-202ENST00000396526 TGFBRAP1Q8WUH2 860 aa18.59■□□□□ 0.57
SNX6-202ENST00000396526 FAM13BQ9NYF5 915 aa18.59■□□□□ 0.57
SNX6-202ENST00000396526 NPR1P16066 1061 aa18.59■□□□□ 0.57
SNX6-202ENST00000396526 TROAPQ12815 778 aa18.59■□□□□ 0.57
SNX6-202ENST00000396526 CMTR1Q8N1G2 835 aaKnown RBP18.59■□□□□ 0.57
SNX6-202ENST00000396526 KRI1Q8N9T8 703 aaKnown RBP18.59■□□□□ 0.57
SNX6-202ENST00000396526 SH3RF3Q8TEJ3 882 aaPredicted RBP18.59■□□□□ 0.57
SNX6-202ENST00000396526 TIGD1Q96MW7 591 aa18.59■□□□□ 0.57
SNX6-202ENST00000396526 GPR101Q96P66 508 aaPredicted RBP18.59■□□□□ 0.57
SNX6-202ENST00000396526 TRIM5Q9C035 493 aa18.59■□□□□ 0.57
SNX6-202ENST00000396526 TSPY3P0CV98 308 aa18.58■□□□□ 0.57
SNX6-202ENST00000396526 TSPY8P0CW00 308 aa18.58■□□□□ 0.57
SNX6-202ENST00000396526 DRC7Q8IY82 874 aa18.58■□□□□ 0.57
SNX6-202ENST00000396526 TEX11Q8IYF3 940 aa18.58■□□□□ 0.57
SNX6-202ENST00000396526 MYH13Q9UKX3 1938 aa18.58■□□□□ 0.57
SNX6-202ENST00000396526 BMP15O95972 392 aa18.58■□□□□ 0.56
SNX6-202ENST00000396526 CYP2D6P10635 497 aa18.58■□□□□ 0.56
SNX6-202ENST00000396526 GUCY1A2P33402 732 aa18.58■□□□□ 0.56
SNX6-202ENST00000396526 BTDP43251 543 aa18.58■□□□□ 0.56
SNX6-202ENST00000396526 TPM4P67936 248 aa18.58■□□□□ 0.56
SNX6-202ENST00000396526 COA1Q9GZY4 146 aa18.58■□□□□ 0.56
SNX6-202ENST00000396526 KRT2P35908 639 aa18.58■□□□□ 0.56
SNX6-202ENST00000396526 ATP6V0A2Q9Y487 856 aa18.58■□□□□ 0.56
SNX6-202ENST00000396526 TMTC3Q6ZXV5 915 aa18.57■□□□□ 0.56
SNX6-202ENST00000396526 PFKFB1P16118 471 aa18.57■□□□□ 0.56
SNX6-202ENST00000396526 AXDND1Q5T1B0 1012 aaPredicted RBP18.57■□□□□ 0.56
SNX6-202ENST00000396526 MPNDQ8N594 471 aa18.57■□□□□ 0.56
SNX6-202ENST00000396526 KIAA1468Q9P260 1216 aa18.57■□□□□ 0.56
SNX6-202ENST00000396526 SUGT1Q9Y2Z0 365 aa18.57■□□□□ 0.56
SNX6-202ENST00000396526 CCDC88AQ3V6T2 1871 aa18.57■□□□□ 0.56
SNX6-202ENST00000396526 TNRC6CQ9HCJ0 1690 aaKnown RBP18.57■□□□□ 0.56
SNX6-202ENST00000396526 PROM2Q8N271 834 aa18.56■□□□□ 0.56
SNX6-202ENST00000396526 FAM163AQ96GL9 167 aaPredicted RBP18.56■□□□□ 0.56
SNX6-202ENST00000396526 GPR75-ASB3A0A0A6YYF3 556 aa18.56■□□□□ 0.56
SNX6-202ENST00000396526 POLLQ9UGP5 575 aa18.56■□□□□ 0.56
SNX6-202ENST00000396526 SMIM22K7EJ46 135 aa18.56■□□□□ 0.56
SNX6-202ENST00000396526 MAPKAPK5Q8IW41 473 aa18.56■□□□□ 0.56
SNX6-202ENST00000396526 FBXW7Q969H0 707 aa18.56■□□□□ 0.56
SNX6-202ENST00000396526 EYA3Q99504 573 aa18.56■□□□□ 0.56
SNX6-202ENST00000396526 PTPAQ15257 358 aa18.55■□□□□ 0.56
SNX6-202ENST00000396526 MAP3K14Q99558 947 aa18.55■□□□□ 0.56
SNX6-202ENST00000396526 UBR3Q6ZT12 1888 aa18.55■□□□□ 0.56
SNX6-202ENST00000396526 DUOX1Q9NRD9 1551 aa18.55■□□□□ 0.56
SNX6-202ENST00000396526 CASZ1Q86V15 1759 aa18.55■□□□□ 0.56
SNX6-202ENST00000396526 TRIM75PA6NK02 468 aa18.55■□□□□ 0.56
SNX6-202ENST00000396526 CABP5Q9NP86 173 aa18.55■□□□□ 0.56
SNX6-202ENST00000396526 MYH15Q9Y2K3 1946 aa18.55■□□□□ 0.56
SNX6-202ENST00000396526 ATP2B1P20020 1258 aa18.55■□□□□ 0.56
SNX6-202ENST00000396526 GTF2IP78347 998 aa18.55■□□□□ 0.56
SNX6-202ENST00000396526 SLC4A8Q2Y0W8 1093 aa18.55■□□□□ 0.56
SNX6-202ENST00000396526 DPP8Q6V1X1 898 aaPredicted RBP18.55■□□□□ 0.56
SNX6-202ENST00000396526 RTFDC1Q9BY42 306 aaPredicted RBP18.55■□□□□ 0.56
SNX6-202ENST00000396526 VPS54Q9P1Q0 977 aa18.55■□□□□ 0.56
SNX6-202ENST00000396526 FAM205AQ6ZU69 1335 aa18.54■□□□□ 0.56
SNX6-202ENST00000396526 ZNF500O60304 480 aaPredicted RBP18.54■□□□□ 0.56
SNX6-202ENST00000396526 CALML3P27482 149 aa18.54■□□□□ 0.56
SNX6-202ENST00000396526 MKRN1Q9UHC7 482 aaKnown RBP18.54■□□□□ 0.56
SNX6-202ENST00000396526 BAZ2AQ9UIF9 1905 aaKnown RBP18.54■□□□□ 0.56
SNX6-202ENST00000396526 WDHD1O75717 1129 aaPredicted RBP18.54■□□□□ 0.56
SNX6-202ENST00000396526 PLEKHA8P1O95397 391 aa18.54■□□□□ 0.56
SNX6-202ENST00000396526 NLRP5P59047 1200 aa18.54■□□□□ 0.56
SNX6-202ENST00000396526 PDZRN4Q6ZMN7 1036 aaPredicted RBP18.54■□□□□ 0.56
SNX6-202ENST00000396526 COL23A1Q86Y22 540 aaPredicted RBP18.54■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms