RNA–Protein interactions for RNA: ENST00000396342.6

DDR1-229, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

TSL 3

Gene DDR1, Length 675 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-229ENST00000396342 DOCK2Q92608 1830 aa19.88■□□□□ 0.77
DDR1-229ENST00000396342 ELNP15502 786 aa19.88■□□□□ 0.77
DDR1-229ENST00000396342 RPAP2Q8IXW5 612 aaPredicted RBP19.88■□□□□ 0.77
DDR1-229ENST00000396342 GPRC5AQ8NFJ5 357 aa19.88■□□□□ 0.77
DDR1-229ENST00000396342 KIF1BPQ96EK5 621 aa19.88■□□□□ 0.77
DDR1-229ENST00000396342 GLRX3O76003 335 aaKnown RBP19.87■□□□□ 0.77
DDR1-229ENST00000396342 GDF11O95390 407 aa19.87■□□□□ 0.77
DDR1-229ENST00000396342 SGPL1O95470 568 aa19.87■□□□□ 0.77
DDR1-229ENST00000396342 POLR3DP05423 398 aaPredicted RBP19.87■□□□□ 0.77
DDR1-229ENST00000396342 RLBP1P12271 317 aa19.87■□□□□ 0.77
DDR1-229ENST00000396342 USP14P54578 494 aa19.87■□□□□ 0.77
DDR1-229ENST00000396342 USP17L2Q6R6M4 530 aa19.87■□□□□ 0.77
DDR1-229ENST00000396342 AMOTL1Q8IY63 956 aa19.87■□□□□ 0.77
DDR1-229ENST00000396342 PANK1Q8TE04 598 aa19.87■□□□□ 0.77
DDR1-229ENST00000396342 CRNKL1Q9BZJ0 848 aaKnown RBP19.87■□□□□ 0.77
DDR1-229ENST00000396342 UNC93B1Q9H1C4 597 aa19.87■□□□□ 0.77
DDR1-229ENST00000396342 SERPINB13Q9UIV8 391 aa19.87■□□□□ 0.77
DDR1-229ENST00000396342 ZBTB21Q9ULJ3 1066 aa19.87■□□□□ 0.77
DDR1-229ENST00000396342 APBB1O00213 710 aa19.86■□□□□ 0.77
DDR1-229ENST00000396342 HMGCRP04035 888 aa19.86■□□□□ 0.77
DDR1-229ENST00000396342 DYNLL1P63167 89 aaKnown RBP19.86■□□□□ 0.77
DDR1-229ENST00000396342 TRMT44Q8IYL2 757 aaKnown RBP19.86■□□□□ 0.77
DDR1-229ENST00000396342 DDRGK1Q96HY6 314 aa19.86■□□□□ 0.77
DDR1-229ENST00000396342 DEFB118Q96PH6 123 aa19.86■□□□□ 0.77
DDR1-229ENST00000396342 TLR7Q9NYK1 1049 aaKnown RBP19.86■□□□□ 0.77
DDR1-229ENST00000396342 MAGEB6P1A0A0J9YX57 407 aa19.85■□□□□ 0.77
DDR1-229ENST00000396342 H0YGN5 161 aa19.85■□□□□ 0.77
DDR1-229ENST00000396342 RAB11FIP3O75154 756 aa19.85■□□□□ 0.77
DDR1-229ENST00000396342 MAPK4P31152 587 aa19.85■□□□□ 0.77
DDR1-229ENST00000396342 HOXA7P31268 230 aaPredicted RBP19.85■□□□□ 0.77
DDR1-229ENST00000396342 CCNA1P78396 465 aa19.85■□□□□ 0.77
DDR1-229ENST00000396342 RAB3GAP1Q15042 981 aa19.85■□□□□ 0.77
DDR1-229ENST00000396342 CERKLQ49MI3 558 aaPredicted RBP19.85■□□□□ 0.77
DDR1-229ENST00000396342 ADGRA1Q86SQ6 560 aa19.85■□□□□ 0.77
DDR1-229ENST00000396342 RHPN1Q8TCX5 695 aa19.85■□□□□ 0.77
DDR1-229ENST00000396342 SOCS4Q8WXH5 440 aa19.85■□□□□ 0.77
DDR1-229ENST00000396342 NUDT12Q9BQG2 462 aa19.85■□□□□ 0.77
DDR1-229ENST00000396342 EVI5O60447 810 aa19.84■□□□□ 0.77
DDR1-229ENST00000396342 SLC9C2Q5TAH2 1124 aa19.84■□□□□ 0.77
DDR1-229ENST00000396342 METTL16Q86W50 562 aaKnown RBP19.84■□□□□ 0.77
DDR1-229ENST00000396342 DDX24Q9GZR7 859 aaKnown RBP eCLIP19.84■□□□□ 0.771e-7■■■■■ 30.8
DDR1-229ENST00000396342 EHD4Q9H223 541 aa19.84■□□□□ 0.77
DDR1-229ENST00000396342 HMX1Q9NP08 348 aaPredicted RBP19.84■□□□□ 0.77
DDR1-229ENST00000396342 IL1RAPL2Q9NP60 686 aa19.84■□□□□ 0.77
DDR1-229ENST00000396342 MORF4L1Q9UBU8 362 aa19.84■□□□□ 0.77
DDR1-229ENST00000396342 GH2P01242 217 aa19.83■□□□□ 0.77
DDR1-229ENST00000396342 HERVK_113P62684 666 aa19.83■□□□□ 0.77
DDR1-229ENST00000396342 ABCB5Q2M3G0 1257 aa19.83■□□□□ 0.77
DDR1-229ENST00000396342 DNAJC2Q99543 621 aaKnown RBP19.83■□□□□ 0.77
DDR1-229ENST00000396342 PAGR1Q9BTK6 254 aa19.83■□□□□ 0.77
DDR1-229ENST00000396342 TNRC18O15417 2968 aaPredicted RBP19.83■□□□□ 0.76
DDR1-229ENST00000396342 DOCK1Q14185 1865 aa19.82■□□□□ 0.76
DDR1-229ENST00000396342 USP17L15C9J2P7 530 aa19.82■□□□□ 0.76
DDR1-229ENST00000396342 USP17L13C9JLJ4 530 aa19.82■□□□□ 0.76
DDR1-229ENST00000396342 USP17L11C9JVI0 530 aa19.82■□□□□ 0.76
DDR1-229ENST00000396342 USP17L18D6R9N7 530 aa19.82■□□□□ 0.76
DDR1-229ENST00000396342 USP17L22D6RA61 530 aa19.82■□□□□ 0.76
DDR1-229ENST00000396342 USP17L17D6RBQ6 530 aa19.82■□□□□ 0.76
DDR1-229ENST00000396342 USP17L19D6RCP7 530 aa19.82■□□□□ 0.76
DDR1-229ENST00000396342 USP17L20D6RJB6 530 aa19.82■□□□□ 0.76
DDR1-229ENST00000396342 USP17L24Q0WX57 530 aa19.82■□□□□ 0.76
DDR1-229ENST00000396342 NECAB2Q7Z6G3 386 aa19.82■□□□□ 0.76
DDR1-229ENST00000396342 SHISA4Q96DD7 197 aa19.82■□□□□ 0.76
DDR1-229ENST00000396342 P2RX7Q99572 595 aaKnown RBP19.82■□□□□ 0.76
DDR1-229ENST00000396342 XRN2Q9H0D6 950 aaKnown RBP eCLIP19.82■□□□□ 0.769e-6■■■■■ 32.4
DDR1-229ENST00000396342 COLQQ9Y215 455 aaPredicted RBP19.82■□□□□ 0.76
DDR1-229ENST00000396342 RBBP6Q7Z6E9 1792 aaKnown RBP19.82■□□□□ 0.76
DDR1-229ENST00000396342 MPHOSPH10O00566 681 aaKnown RBP19.81■□□□□ 0.76
DDR1-229ENST00000396342 RRP1BQ14684 758 aaKnown RBP19.81■□□□□ 0.76
DDR1-229ENST00000396342 ZYXQ15942 572 aaKnown RBP19.81■□□□□ 0.76
DDR1-229ENST00000396342 WDR78Q5VTH9 848 aa19.81■□□□□ 0.76
DDR1-229ENST00000396342 MCM9Q9NXL9 1143 aa19.81■□□□□ 0.76
DDR1-229ENST00000396342 RPTORQ8N122 1335 aa19.8■□□□□ 0.76
DDR1-229ENST00000396342 GOLIM4O00461 696 aa19.8■□□□□ 0.76
DDR1-229ENST00000396342 ZKSCAN1P17029 563 aaPredicted RBP19.8■□□□□ 0.76
DDR1-229ENST00000396342 RGS2P41220 211 aa19.8■□□□□ 0.76
DDR1-229ENST00000396342 ANKLE1Q8NAG6 615 aa19.8■□□□□ 0.76
DDR1-229ENST00000396342 PPIL4Q8WUA2 492 aaKnown RBP eCLIP19.8■□□□□ 0.76
DDR1-229ENST00000396342 COG6Q9Y2V7 657 aa19.8■□□□□ 0.76
DDR1-229ENST00000396342 IVNS1ABPQ9Y6Y0 642 aa19.8■□□□□ 0.76
DDR1-229ENST00000396342 CYP2B6P20813 491 aa19.79■□□□□ 0.76
DDR1-229ENST00000396342 ERVK-9P63128 1117 aa19.79■□□□□ 0.76
DDR1-229ENST00000396342 ERVK-24P63145 666 aa19.79■□□□□ 0.76
DDR1-229ENST00000396342 ZSCAN25Q6NSZ9 544 aa19.79■□□□□ 0.76
DDR1-229ENST00000396342 TATDN1Q6P1N9 297 aa19.79■□□□□ 0.76
DDR1-229ENST00000396342 CHRDL2Q6WN34 429 aa19.79■□□□□ 0.76
DDR1-229ENST00000396342 ANTXR1Q9H6X2 564 aa19.79■□□□□ 0.76
DDR1-229ENST00000396342 DNAJC18Q9H819 358 aa19.79■□□□□ 0.76
DDR1-229ENST00000396342 PAK6Q9NQU5 681 aaPredicted RBP19.79■□□□□ 0.76
DDR1-229ENST00000396342 NDUFB9Q9Y6M9 179 aa19.79■□□□□ 0.76
DDR1-229ENST00000396342 XRCC5P13010 732 aaKnown RBP19.78■□□□□ 0.76
DDR1-229ENST00000396342 PDE6AP16499 860 aa19.78■□□□□ 0.76
DDR1-229ENST00000396342 PLEKHH3Q7Z736 793 aa19.78■□□□□ 0.76
DDR1-229ENST00000396342 SH2D4AQ9H788 454 aa19.78■□□□□ 0.76
DDR1-229ENST00000396342 RCAN3Q9UKA8 241 aa19.78■□□□□ 0.76
DDR1-229ENST00000396342 RABGAP1Q9Y3P9 1069 aa19.78■□□□□ 0.76
DDR1-229ENST00000396342 GPATCH3Q96I76 525 aa19.77■□□□□ 0.76
DDR1-229ENST00000396342 NBPF3Q9H094 633 aa19.77■□□□□ 0.76
DDR1-229ENST00000396342 KIAA1683Q9H0B3 1180 aa19.77■□□□□ 0.76
DDR1-229ENST00000396342 EMILIN3Q9NT22 766 aa19.77■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms