RNA–Protein interactions for RNA: ENST00000396222.6

LDHA-204, Transcript of lactate dehydrogenase A, humanhuman

TSL 2 BASIC

Gene LDHA, Length 1,766 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDHA-204ENST00000396222 CALM2P0DP24 149 aa8.85□□□□□ -0.99
LDHA-204ENST00000396222 CALM3P0DP25 149 aa8.85□□□□□ -0.99
LDHA-204ENST00000396222 NCLP19338 710 aaKnown RBP8.85□□□□□ -0.99
LDHA-204ENST00000396222 PDIA3P30101 505 aaKnown RBP8.85□□□□□ -0.99
LDHA-204ENST00000396222 MMP14P50281 582 aa8.85□□□□□ -0.99
LDHA-204ENST00000396222 METAP2P50579 478 aaKnown RBP eCLIP8.85□□□□□ -0.995e-10■■□□□ 11.5
LDHA-204ENST00000396222 COL9A3Q14050 684 aaPredicted RBP8.85□□□□□ -0.99
LDHA-204ENST00000396222 DALRD3Q5D0E6 543 aaKnown RBP8.85□□□□□ -0.99
LDHA-204ENST00000396222 IFFO2Q5TF58 517 aa8.85□□□□□ -0.99
LDHA-204ENST00000396222 TTC6Q86TZ1 520 aa8.85□□□□□ -0.99
LDHA-204ENST00000396222 ZNF384Q8TF68 577 aa8.85□□□□□ -0.99
LDHA-204ENST00000396222 LRRC2Q9BYS8 371 aa8.85□□□□□ -0.99
LDHA-204ENST00000396222 MKNK2Q9HBH9 465 aa8.85□□□□□ -0.99
LDHA-204ENST00000396222 HDAC9Q9UKV0 1011 aa8.85□□□□□ -0.99
LDHA-204ENST00000396222 DLEC1Q9Y238 1755 aa8.85□□□□□ -0.99
LDHA-204ENST00000396222 NEDD4P46934 1319 aa8.85□□□□□ -0.99
LDHA-204ENST00000396222 SRCAPQ6ZRS2 3230 aa8.84□□□□□ -0.99
LDHA-204ENST00000396222 SH2B2O14492 632 aaPredicted RBP8.84□□□□□ -0.99
LDHA-204ENST00000396222 ZBTB43O43298 467 aa8.84□□□□□ -0.99
LDHA-204ENST00000396222 RANBP6O60518 1105 aaKnown RBP8.84□□□□□ -0.99
LDHA-204ENST00000396222 FGRP09769 529 aa8.84□□□□□ -0.99
LDHA-204ENST00000396222 ZSCAN22P10073 491 aaPredicted RBP8.84□□□□□ -0.99
LDHA-204ENST00000396222 DPEP1P16444 411 aa8.84□□□□□ -0.99
LDHA-204ENST00000396222 SYT1P21579 422 aa8.84□□□□□ -0.99
LDHA-204ENST00000396222 KCNA1Q09470 495 aa8.84□□□□□ -0.99
LDHA-204ENST00000396222 SCRN1Q12765 414 aa8.84□□□□□ -0.99
LDHA-204ENST00000396222 DIXDC1Q155Q3 683 aa8.84□□□□□ -0.99
LDHA-204ENST00000396222 AOC3Q16853 763 aa8.84□□□□□ -0.99
LDHA-204ENST00000396222 CHST3Q7LGC8 479 aa8.84□□□□□ -0.99
LDHA-204ENST00000396222 ZNF444Q8N0Y2 327 aaPredicted RBP8.84□□□□□ -0.99
LDHA-204ENST00000396222 NECAB1Q8N987 351 aa8.84□□□□□ -0.99
LDHA-204ENST00000396222 SH3RF3Q8TEJ3 882 aaPredicted RBP8.84□□□□□ -0.99
LDHA-204ENST00000396222 TGFBRAP1Q8WUH2 860 aa8.84□□□□□ -0.99
LDHA-204ENST00000396222 WASF1Q92558 559 aa8.84□□□□□ -0.99
LDHA-204ENST00000396222 UPF1Q92900 1129 aaKnown RBP eCLIP8.84□□□□□ -0.991e-6■■□□□ 13.1
LDHA-204ENST00000396222 DBNDD1Q9H9R9 158 aa8.84□□□□□ -0.99
LDHA-204ENST00000396222 A0A0G2JLW4 131 aa8.84□□□□□ -1
LDHA-204ENST00000396222 TSPY2A6NKD2 308 aa8.84□□□□□ -1
LDHA-204ENST00000396222 HLA-DOAP06340 250 aa8.84□□□□□ -1
LDHA-204ENST00000396222 HIC1Q14526 733 aa8.84□□□□□ -1
LDHA-204ENST00000396222 R3HDM1Q15032 1099 aaKnown RBP8.84□□□□□ -1
LDHA-204ENST00000396222 PPP4R3BQ5MIZ7 849 aa8.84□□□□□ -1
LDHA-204ENST00000396222 C12orf60Q5U649 245 aa8.84□□□□□ -1
LDHA-204ENST00000396222 APOA5Q6Q788 366 aa8.84□□□□□ -1
LDHA-204ENST00000396222 CATIPQ7Z7H3 387 aa8.84□□□□□ -1
LDHA-204ENST00000396222 LARGE2Q8N3Y3 721 aa8.84□□□□□ -1
LDHA-204ENST00000396222 OGFOD1Q8N543 542 aa8.84□□□□□ -1
LDHA-204ENST00000396222 PROCA1Q8NCQ7 364 aaPredicted RBP8.84□□□□□ -1
LDHA-204ENST00000396222 IGDCC4Q8TDY8 1250 aa8.84□□□□□ -1
LDHA-204ENST00000396222 KIF12Q96FN5 646 aa8.84□□□□□ -1
LDHA-204ENST00000396222 PDGFDQ9GZP0 370 aaPredicted RBP8.84□□□□□ -1
LDHA-204ENST00000396222 NBPF3Q9H094 633 aa8.84□□□□□ -1
LDHA-204ENST00000396222 ZSCAN16Q9H4T2 348 aaPredicted RBP8.84□□□□□ -1
LDHA-204ENST00000396222 KIF13BQ9NQT8 1826 aa8.83□□□□□ -1
LDHA-204ENST00000396222 ROBO3Q96MS0 1386 aa8.83□□□□□ -1
LDHA-204ENST00000396222 VPS37CA5D8V6 355 aaPredicted RBP8.83□□□□□ -1
LDHA-204ENST00000396222 RBM5P52756 815 aaKnown RBP eCLIP8.83□□□□□ -1
LDHA-204ENST00000396222 ANTXR2P58335 489 aa8.83□□□□□ -1
LDHA-204ENST00000396222 ST3GAL1Q11201 340 aa8.83□□□□□ -1
LDHA-204ENST00000396222 SKIV2LQ15477 1246 aaKnown RBP8.83□□□□□ -1
LDHA-204ENST00000396222 IFIT1BQ5T764 474 aaKnown RBP8.83□□□□□ -1
LDHA-204ENST00000396222 MCTP1Q6DN14 999 aa8.83□□□□□ -1
LDHA-204ENST00000396222 OLFM4Q6UX06 510 aa8.83□□□□□ -1
LDHA-204ENST00000396222 CYB5R4Q7L1T6 521 aa8.83□□□□□ -1
LDHA-204ENST00000396222 NIM1KQ8IY84 436 aa8.83□□□□□ -1
LDHA-204ENST00000396222 TRIM22Q8IYM9 498 aa8.83□□□□□ -1
LDHA-204ENST00000396222 SMARCC2Q8TAQ2 1214 aa8.83□□□□□ -1
LDHA-204ENST00000396222 JDP2Q8WYK2 163 aa8.83□□□□□ -1
LDHA-204ENST00000396222 ZDHHC15Q96MV8 337 aa8.83□□□□□ -1
LDHA-204ENST00000396222 ZSCAN10Q96SZ4 725 aaPredicted RBP8.83□□□□□ -1
LDHA-204ENST00000396222 DHX36Q9H2U1 1008 aaKnown RBP8.83□□□□□ -1
LDHA-204ENST00000396222 LY9Q9HBG7 655 aa8.83□□□□□ -1
LDHA-204ENST00000396222 RBM28Q9NW13 759 aaKnown RBP8.83□□□□□ -1
LDHA-204ENST00000396222 PPP1R1BQ9UD71 204 aaPredicted RBP8.83□□□□□ -1
LDHA-204ENST00000396222 DAGLAQ9Y4D2 1042 aa8.83□□□□□ -1
LDHA-204ENST00000396222 SLX4Q8IY92 1834 aa8.83□□□□□ -1
LDHA-204ENST00000396222 PTPDC1A2A3K4 754 aa8.82□□□□□ -1
LDHA-204ENST00000396222 GOLGA8AA7E2F4 631 aa8.82□□□□□ -1
LDHA-204ENST00000396222 F13A1P00488 732 aa8.82□□□□□ -1
LDHA-204ENST00000396222 CCT2P78371 535 aaKnown RBP8.82□□□□□ -1
LDHA-204ENST00000396222 TRIM29Q14134 588 aa8.82□□□□□ -1
LDHA-204ENST00000396222 NSUN7Q8NE18 718 aaKnown RBP8.82□□□□□ -1
LDHA-204ENST00000396222 LMBRD1Q9NUN5 540 aa8.82□□□□□ -1
LDHA-204ENST00000396222 USP40Q9NVE5 1235 aa8.82□□□□□ -1
LDHA-204ENST00000396222 TMOD2Q9NZR1 351 aa8.82□□□□□ -1
LDHA-204ENST00000396222 SWAP70Q9UH65 585 aa8.82□□□□□ -1
LDHA-204ENST00000396222 MKRN1Q9UHC7 482 aaKnown RBP8.82□□□□□ -1
LDHA-204ENST00000396222 MYH2Q9UKX2 1941 aa8.82□□□□□ -1
LDHA-204ENST00000396222 TNKSO95271 1327 aa8.82□□□□□ -1
LDHA-204ENST00000396222 FLT1P17948 1338 aa8.82□□□□□ -1
LDHA-204ENST00000396222 F8W031 263 aaPredicted RBP8.81□□□□□ -1
LDHA-204ENST00000396222 TSPY3P0CV98 308 aa8.81□□□□□ -1
LDHA-204ENST00000396222 TSPY8P0CW00 308 aa8.81□□□□□ -1
LDHA-204ENST00000396222 XBP1P17861 261 aa8.81□□□□□ -1
LDHA-204ENST00000396222 KCNA3P22001 575 aa8.81□□□□□ -1
LDHA-204ENST00000396222 KIF5BP33176 963 aa8.81□□□□□ -1
LDHA-204ENST00000396222 CRKP46108 304 aa8.81□□□□□ -1
LDHA-204ENST00000396222 AKAP17AQ02040 695 aaKnown RBP8.81□□□□□ -1
LDHA-204ENST00000396222 DACT2Q5SW24 774 aa8.81□□□□□ -1
LDHA-204ENST00000396222 ATL3Q6DD88 541 aa8.81□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms