RNA–Protein interactions for RNA: ENST00000395761.3

CXCL1-201, Transcript of C-X-C motif chemokine ligand 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CXCL1, Length 1,097 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL1-201ENST00000395761 BEGAINQ9BUH8 593 aa19.8■□□□□ 0.76
CXCL1-201ENST00000395761 ARPP21Q9UBL0 812 aaPredicted RBP19.8■□□□□ 0.76
CXCL1-201ENST00000395761 TSKSQ9UJT2 592 aa19.8■□□□□ 0.76
CXCL1-201ENST00000395761 AFG3L2Q9Y4W6 797 aa19.8■□□□□ 0.76
CXCL1-201ENST00000395761 TESPA1A2RU30 521 aaPredicted RBP19.79■□□□□ 0.76
CXCL1-201ENST00000395761 HIP1O00291 1037 aa19.79■□□□□ 0.76
CXCL1-201ENST00000395761 CERKLQ49MI3 558 aaPredicted RBP19.79■□□□□ 0.76
CXCL1-201ENST00000395761 BRI3BPQ8WY22 251 aa19.79■□□□□ 0.76
CXCL1-201ENST00000395761 NACAP1Q9BZK3 213 aa19.79■□□□□ 0.76
CXCL1-201ENST00000395761 KCNH4Q9UQ05 1017 aa19.79■□□□□ 0.76
CXCL1-201ENST00000395761 CCDC171Q6TFL3 1326 aa19.78■□□□□ 0.76
CXCL1-201ENST00000395761 DOCK1Q14185 1865 aa19.78■□□□□ 0.76
CXCL1-201ENST00000395761 CCL15-CCL14A0A0B4J2E2 113 aa19.78■□□□□ 0.76
CXCL1-201ENST00000395761 IGF2BP3O00425 579 aaKnown RBP eCLIP19.78■□□□□ 0.76
CXCL1-201ENST00000395761 TRPA1O75762 1119 aa19.78■□□□□ 0.76
CXCL1-201ENST00000395761 GH2P01242 217 aa19.78■□□□□ 0.76
CXCL1-201ENST00000395761 CDK8P49336 464 aa19.78■□□□□ 0.76
CXCL1-201ENST00000395761 INHBEP58166 350 aa19.78■□□□□ 0.76
CXCL1-201ENST00000395761 SNAPC2Q13487 334 aa19.78■□□□□ 0.76
CXCL1-201ENST00000395761 CCL15Q16663 113 aa19.78■□□□□ 0.76
CXCL1-201ENST00000395761 IFNL1Q8IU54 200 aa19.78■□□□□ 0.76
CXCL1-201ENST00000395761 STK11IPQ8N1F8 1099 aa19.78■□□□□ 0.76
CXCL1-201ENST00000395761 IL25Q9H293 177 aa19.78■□□□□ 0.76
CXCL1-201ENST00000395761 ZBTB21Q9ULJ3 1066 aa19.78■□□□□ 0.76
CXCL1-201ENST00000395761 TRIM75PA6NK02 468 aa19.77■□□□□ 0.76
CXCL1-201ENST00000395761 ASNSP08243 561 aa19.77■□□□□ 0.76
CXCL1-201ENST00000395761 HSPD1P10809 573 aaKnown RBP19.77■□□□□ 0.76
CXCL1-201ENST00000395761 CHMLP26374 656 aa19.77■□□□□ 0.76
CXCL1-201ENST00000395761 ABCB5Q2M3G0 1257 aa19.77■□□□□ 0.76
CXCL1-201ENST00000395761 C16orf86Q6ZW13 317 aa19.77■□□□□ 0.76
CXCL1-201ENST00000395761 NAPBQ9H115 298 aa19.77■□□□□ 0.76
CXCL1-201ENST00000395761 SWAP70Q9UH65 585 aa19.77■□□□□ 0.76
CXCL1-201ENST00000395761 USP17L5A8MUK1 530 aa19.76■□□□□ 0.75
CXCL1-201ENST00000395761 CXCL11O14625 94 aa19.76■□□□□ 0.75
CXCL1-201ENST00000395761 CETPP11597 493 aa19.76■□□□□ 0.75
CXCL1-201ENST00000395761 SPP2Q13103 211 aa19.76■□□□□ 0.75
CXCL1-201ENST00000395761 MOGSQ13724 837 aa19.76■□□□□ 0.75
CXCL1-201ENST00000395761 FGAP02671 866 aa19.75■□□□□ 0.75
CXCL1-201ENST00000395761 GUCY1A2P33402 732 aa19.75■□□□□ 0.75
CXCL1-201ENST00000395761 ALX1Q15699 326 aa19.75■□□□□ 0.75
CXCL1-201ENST00000395761 FAM43AQ8N2R8 423 aa19.75■□□□□ 0.75
CXCL1-201ENST00000395761 ZNF280CQ8ND82 737 aa19.75■□□□□ 0.75
CXCL1-201ENST00000395761 GINM1Q9NU53 330 aa19.75■□□□□ 0.75
CXCL1-201ENST00000395761 PHIPQ8WWQ0 1821 aa19.74■□□□□ 0.75
CXCL1-201ENST00000395761 ATAD5Q96QE3 1844 aa19.74■□□□□ 0.75
CXCL1-201ENST00000395761 MPHOSPH10O00566 681 aaKnown RBP19.74■□□□□ 0.75
CXCL1-201ENST00000395761 CA12O43570 354 aa19.74■□□□□ 0.75
CXCL1-201ENST00000395761 TBC1D8O95759 1140 aa19.74■□□□□ 0.75
CXCL1-201ENST00000395761 HSPA8P11142 646 aaKnown RBP19.74■□□□□ 0.75
CXCL1-201ENST00000395761 AKR1B1P15121 316 aa19.74■□□□□ 0.75
CXCL1-201ENST00000395761 PPARAQ07869 468 aa19.74■□□□□ 0.75
CXCL1-201ENST00000395761 RAB3GAP1Q15042 981 aa19.74■□□□□ 0.75
CXCL1-201ENST00000395761 R3HDMLQ9H3Y0 253 aa19.74■□□□□ 0.75
CXCL1-201ENST00000395761 CABP5Q9NP86 173 aa19.74■□□□□ 0.75
CXCL1-201ENST00000395761 SAGE1Q9NXZ1 904 aa19.74■□□□□ 0.75
CXCL1-201ENST00000395761 TAOK2Q9UL54 1235 aa19.74■□□□□ 0.75
CXCL1-201ENST00000395761 ROBO3Q96MS0 1386 aa19.73■□□□□ 0.75
CXCL1-201ENST00000395761 LAMB1P07942 1786 aa19.73■□□□□ 0.75
CXCL1-201ENST00000395761 A0A0G2JLL6 359 aaPredicted RBP19.73■□□□□ 0.75
CXCL1-201ENST00000395761 BTBD19C9JJ37 291 aa19.73■□□□□ 0.75
CXCL1-201ENST00000395761 CTCFP49711 727 aaPredicted RBP19.73■□□□□ 0.75
CXCL1-201ENST00000395761 LBX1P52954 281 aa19.73■□□□□ 0.75
CXCL1-201ENST00000395761 MFAP1P55081 439 aaKnown RBP19.73■□□□□ 0.75
CXCL1-201ENST00000395761 CTDSPL2Q05D32 466 aa19.73■□□□□ 0.75
CXCL1-201ENST00000395761 SEPT2Q15019 361 aa19.73■□□□□ 0.75
CXCL1-201ENST00000395761 BMP2KLQ5H9B9 411 aa19.73■□□□□ 0.75
CXCL1-201ENST00000395761 PRRT2Q7Z6L0 340 aaPredicted RBP19.73■□□□□ 0.75
CXCL1-201ENST00000395761 WDR18Q9BV38 432 aa19.73■□□□□ 0.75
CXCL1-201ENST00000395761 PRDM1O75626 825 aa19.72■□□□□ 0.75
CXCL1-201ENST00000395761 RASA1P20936 1047 aa19.72■□□□□ 0.75
CXCL1-201ENST00000395761 DGKZQ13574 1117 aa19.72■□□□□ 0.75
CXCL1-201ENST00000395761 GPAT2Q6NUI2 795 aa19.72■□□□□ 0.75
CXCL1-201ENST00000395761 TBC1D2Q9BYX2 928 aa19.72■□□□□ 0.75
CXCL1-201ENST00000395761 AS3MTQ9HBK9 375 aa19.72■□□□□ 0.75
CXCL1-201ENST00000395761 INCENPQ9NQS7 918 aa19.72■□□□□ 0.75
CXCL1-201ENST00000395761 TACC3Q9Y6A5 838 aa19.72■□□□□ 0.75
CXCL1-201ENST00000395761 ALDH1A1P00352 501 aa19.71■□□□□ 0.75
CXCL1-201ENST00000395761 HMGCS2P54868 508 aa19.71■□□□□ 0.75
CXCL1-201ENST00000395761 OTUD7BQ6GQQ9 843 aa19.71■□□□□ 0.75
CXCL1-201ENST00000395761 GADL1Q6ZQY3 521 aa19.71■□□□□ 0.75
CXCL1-201ENST00000395761 ACER1Q8TDN7 264 aa19.71■□□□□ 0.75
CXCL1-201ENST00000395761 RUFY2Q8WXA3 655 aa19.71■□□□□ 0.75
CXCL1-201ENST00000395761 CCDC17Q96LX7 622 aa19.71■□□□□ 0.75
CXCL1-201ENST00000395761 MKNK2Q9HBH9 465 aa19.71■□□□□ 0.75
CXCL1-201ENST00000395761 BACE1P56817 501 aa19.7■□□□□ 0.74
CXCL1-201ENST00000395761 MTMR2Q13614 643 aa19.7■□□□□ 0.74
CXCL1-201ENST00000395761 TMEM179Q6ZVK1 233 aa19.7■□□□□ 0.74
CXCL1-201ENST00000395761 ANKRD23Q86SG2 305 aa19.7■□□□□ 0.74
CXCL1-201ENST00000395761 CLEC10AQ8IUN9 316 aa19.7■□□□□ 0.74
CXCL1-201ENST00000395761 SIAH1Q8IUQ4 282 aa19.7■□□□□ 0.74
CXCL1-201ENST00000395761 GNL3Q9BVP2 549 aaKnown RBP eCLIP19.7■□□□□ 0.74
CXCL1-201ENST00000395761 ANAPC4Q9UJX5 808 aa19.7■□□□□ 0.74
CXCL1-201ENST00000395761 PDHXO00330 501 aa19.69■□□□□ 0.74
CXCL1-201ENST00000395761 SGSM2O43147 1006 aa19.69■□□□□ 0.74
CXCL1-201ENST00000395761 SLC3A2P08195 630 aaKnown RBP19.69■□□□□ 0.74
CXCL1-201ENST00000395761 HAND2P61296 217 aa19.69■□□□□ 0.74
CXCL1-201ENST00000395761 CRHR2Q13324 411 aa19.69■□□□□ 0.74
CXCL1-201ENST00000395761 SH3D19Q5HYK7 790 aa19.69■□□□□ 0.74
CXCL1-201ENST00000395761 FASTKD5Q7L8L6 764 aaKnown RBP19.69■□□□□ 0.74
CXCL1-201ENST00000395761 DSCC1Q9BVC3 393 aa19.69■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 60.2 ms