RNA–Protein interactions for RNA: ENST00000395721.6

PTPN20-205, Transcript of protein tyrosine phosphatase, non-receptor type 20, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPN20, Length 2,779 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN20-205ENST00000395721 PROCA1Q8NCQ7 364 aaPredicted RBP10.66□□□□□ -0.7
PTPN20-205ENST00000395721 SLC4A8Q2Y0W8 1093 aa10.66□□□□□ -0.7
PTPN20-205ENST00000395721 TTC6Q86TZ1 520 aa10.66□□□□□ -0.7
PTPN20-205ENST00000395721 CRNKL1Q9BZJ0 848 aaKnown RBP10.66□□□□□ -0.7
PTPN20-205ENST00000395721 LRRCC1Q9C099 1032 aa10.66□□□□□ -0.7
PTPN20-205ENST00000395721 TMOD4Q9NZQ9 345 aa10.66□□□□□ -0.7
PTPN20-205ENST00000395721 BCRP11274 1271 aa10.65□□□□□ -0.7
PTPN20-205ENST00000395721 OSBPP22059 807 aa10.65□□□□□ -0.7
PTPN20-205ENST00000395721 SLC9C2Q5TAH2 1124 aa10.65□□□□□ -0.7
PTPN20-205ENST00000395721 RAET1EQ8TD07 263 aa10.65□□□□□ -0.7
PTPN20-205ENST00000395721 SRRDQ9UH36 339 aa10.65□□□□□ -0.7
PTPN20-205ENST00000395721 FOCADQ5VW36 1801 aa10.65□□□□□ -0.7
PTPN20-205ENST00000395721 ATAD5Q96QE3 1844 aa10.65□□□□□ -0.7
PTPN20-205ENST00000395721 CDK5RAP2Q96SN8 1893 aa10.65□□□□□ -0.7
PTPN20-205ENST00000395721 MYPNQ86TC9 1320 aa10.65□□□□□ -0.7
PTPN20-205ENST00000395721 PHIPQ8WWQ0 1821 aa10.65□□□□□ -0.7
PTPN20-205ENST00000395721 RRP9O43818 475 aaKnown RBP10.65□□□□□ -0.7
PTPN20-205ENST00000395721 GDF11O95390 407 aa10.65□□□□□ -0.7
PTPN20-205ENST00000395721 HMGCS2P54868 508 aa10.65□□□□□ -0.7
PTPN20-205ENST00000395721 RRP1BQ14684 758 aaKnown RBP10.65□□□□□ -0.7
PTPN20-205ENST00000395721 TRIM47Q96LD4 638 aa10.65□□□□□ -0.7
PTPN20-205ENST00000395721 WDR18Q9BV38 432 aa10.65□□□□□ -0.7
PTPN20-205ENST00000395721 DDX24Q9GZR7 859 aaKnown RBP eCLIP10.65□□□□□ -0.7
PTPN20-205ENST00000395721 BOLA2Q9H3K6 86 aa10.65□□□□□ -0.7
PTPN20-205ENST00000395721 PAG1Q9NWQ8 432 aa10.65□□□□□ -0.7
PTPN20-205ENST00000395721 ZBTB21Q9ULJ3 1066 aa10.65□□□□□ -0.7
PTPN20-205ENST00000395721 ZSWIM8A7E2V4 1837 aa10.65□□□□□ -0.7
PTPN20-205ENST00000395721 SIPA1L1O43166 1804 aa10.65□□□□□ -0.7
PTPN20-205ENST00000395721 ZNF532Q9HCE3 1301 aa10.65□□□□□ -0.71
PTPN20-205ENST00000395721 POLR3DP05423 398 aaPredicted RBP10.65□□□□□ -0.71
PTPN20-205ENST00000395721 ATP5JP18859 108 aa10.65□□□□□ -0.71
PTPN20-205ENST00000395721 METTL16Q86W50 562 aaKnown RBP10.65□□□□□ -0.71
PTPN20-205ENST00000395721 GPATCH3Q96I76 525 aa10.65□□□□□ -0.71
PTPN20-205ENST00000395721 ZNF333Q96JL9 665 aa10.65□□□□□ -0.71
PTPN20-205ENST00000395721 DNAJC18Q9H819 358 aa10.65□□□□□ -0.71
PTPN20-205ENST00000395721 PTPRFP10586 1907 aa10.65□□□□□ -0.71
PTPN20-205ENST00000395721 TREML2Q5T2D2 321 aa10.64□□□□□ -0.71
PTPN20-205ENST00000395721 IRX3P78415 501 aaPredicted RBP10.64□□□□□ -0.71
PTPN20-205ENST00000395721 MTMR2Q13614 643 aa10.64□□□□□ -0.71
PTPN20-205ENST00000395721 SH3D19Q5HYK7 790 aa10.64□□□□□ -0.71
PTPN20-205ENST00000395721 SH3TC2Q8TF17 1288 aa10.64□□□□□ -0.71
PTPN20-205ENST00000395721 HAUS7Q99871 368 aa10.64□□□□□ -0.71
PTPN20-205ENST00000395721 RIOK1Q9BRS2 568 aaKnown RBP10.64□□□□□ -0.71
PTPN20-205ENST00000395721 EHD4Q9H223 541 aa10.64□□□□□ -0.71
PTPN20-205ENST00000395721 SERPINB13Q9UIV8 391 aa10.64□□□□□ -0.71
PTPN20-205ENST00000395721 MYH1P12882 1939 aa10.64□□□□□ -0.71
PTPN20-205ENST00000395721 POTEFA5A3E0 1075 aa10.63□□□□□ -0.71
PTPN20-205ENST00000395721 SMARCA5O60264 1052 aaPredicted RBP10.63□□□□□ -0.71
PTPN20-205ENST00000395721 GCLCP48506 637 aaPredicted RBP10.63□□□□□ -0.71
PTPN20-205ENST00000395721 EDC3Q96F86 508 aaKnown RBP10.63□□□□□ -0.71
PTPN20-205ENST00000395721 FEZ1Q99689 392 aa10.63□□□□□ -0.71
PTPN20-205ENST00000395721 BIN2Q9UBW5 565 aaPredicted RBP10.63□□□□□ -0.71
PTPN20-205ENST00000395721 LOC285556D6RIA3 1793 aa10.63□□□□□ -0.71
PTPN20-205ENST00000395721 C19orf81C9J6K1 198 aa10.63□□□□□ -0.71
PTPN20-205ENST00000395721 TNPO2O14787 897 aaKnown RBP10.63□□□□□ -0.71
PTPN20-205ENST00000395721 MYCP01106 439 aaPredicted RBP10.63□□□□□ -0.71
PTPN20-205ENST00000395721 GH2P01242 217 aa10.63□□□□□ -0.71
PTPN20-205ENST00000395721 ZSCAN25Q6NSZ9 544 aa10.63□□□□□ -0.71
PTPN20-205ENST00000395721 CABP5Q9NP86 173 aa10.63□□□□□ -0.71
PTPN20-205ENST00000395721 NAV1Q8NEY1 1877 aa10.63□□□□□ -0.71
PTPN20-205ENST00000395721 USP17L10C9JJH3 530 aa10.62□□□□□ -0.71
PTPN20-205ENST00000395721 CTGFP29279 349 aa10.62□□□□□ -0.71
PTPN20-205ENST00000395721 BACE1P56817 501 aa10.62□□□□□ -0.71
PTPN20-205ENST00000395721 ANKRD13CQ8N6S4 541 aa10.62□□□□□ -0.71
PTPN20-205ENST00000395721 MCM9Q9NXL9 1143 aa10.62□□□□□ -0.71
PTPN20-205ENST00000395721 MBD4O95243 580 aa10.62□□□□□ -0.71
PTPN20-205ENST00000395721 GRK4P32298 578 aa10.62□□□□□ -0.71
PTPN20-205ENST00000395721 ADD2P35612 726 aa10.62□□□□□ -0.71
PTPN20-205ENST00000395721 RRP1P56182 461 aaKnown RBP10.62□□□□□ -0.71
PTPN20-205ENST00000395721 RBM10P98175 930 aaKnown RBP10.62□□□□□ -0.71
PTPN20-205ENST00000395721 PRKCZQ05513 592 aa10.62□□□□□ -0.71
PTPN20-205ENST00000395721 FAM110CQ1W6H9 321 aa10.62□□□□□ -0.71
PTPN20-205ENST00000395721 USP17L2Q6R6M4 530 aa10.62□□□□□ -0.71
PTPN20-205ENST00000395721 AMOTL1Q8IY63 956 aa10.62□□□□□ -0.71
PTPN20-205ENST00000395721 LCORLQ8N3X6 602 aa10.62□□□□□ -0.71
PTPN20-205ENST00000395721 COA7Q96BR5 231 aa10.62□□□□□ -0.71
PTPN20-205ENST00000395721 ASCC2Q9H1I8 757 aaPredicted RBP10.62□□□□□ -0.71
PTPN20-205ENST00000395721 ECHDC1Q9NTX5 307 aa10.62□□□□□ -0.71
PTPN20-205ENST00000395721 TCRBV5S4A2TA0A5A2 114 aa10.61□□□□□ -0.71
PTPN20-205ENST00000395721 UBXN2AP68543 259 aa10.61□□□□□ -0.71
PTPN20-205ENST00000395721 JAG1P78504 1218 aa10.61□□□□□ -0.71
PTPN20-205ENST00000395721 ABCB5Q2M3G0 1257 aa10.61□□□□□ -0.71
PTPN20-205ENST00000395721 CERKLQ49MI3 558 aaPredicted RBP10.61□□□□□ -0.71
PTPN20-205ENST00000395721 SLAIN1Q8ND83 568 aa10.61□□□□□ -0.71
PTPN20-205ENST00000395721 ARMT1Q9H993 441 aa10.61□□□□□ -0.71
PTPN20-205ENST00000395721 RBBP6Q7Z6E9 1792 aaKnown RBP10.61□□□□□ -0.71
PTPN20-205ENST00000395721 SHROOM1Q2M3G4 852 aaPredicted RBP10.61□□□□□ -0.71
PTPN20-205ENST00000395721 DCTPP1Q9H773 170 aa10.61□□□□□ -0.71
PTPN20-205ENST00000395721 EN2P19622 333 aaPredicted RBP10.6□□□□□ -0.71
PTPN20-205ENST00000395721 RAB3GAP1Q15042 981 aa10.6□□□□□ -0.71
PTPN20-205ENST00000395721 TATDN1Q6P1N9 297 aa10.6□□□□□ -0.71
PTPN20-205ENST00000395721 TAOK2Q9UL54 1235 aa10.6□□□□□ -0.71
PTPN20-205ENST00000395721 UBE3CQ15386 1083 aa10.6□□□□□ -0.71
PTPN20-205ENST00000395721 PRPF38BQ5VTL8 546 aaKnown RBP10.6□□□□□ -0.71
PTPN20-205ENST00000395721 GTF3C2Q8WUA4 911 aaPredicted RBP10.6□□□□□ -0.71
PTPN20-205ENST00000395721 SDR42E1Q8WUS8 393 aa10.6□□□□□ -0.71
PTPN20-205ENST00000395721 GABRQQ9UN88 632 aa10.6□□□□□ -0.71
PTPN20-205ENST00000395721 DDX60LQ5H9U9 1706 aaKnown RBP10.6□□□□□ -0.71
PTPN20-205ENST00000395721 MPHOSPH10O00566 681 aaKnown RBP10.6□□□□□ -0.71
PTPN20-205ENST00000395721 ADCY3O60266 1144 aa10.6□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms