RNA–Protein interactions for RNA: ENST00000395667.7

CDRT1-203, CMT1A duplicated region transcript 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CDRT1, Length 3,016 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDRT1-203ENST00000395667 BCORQ6W2J9 1755 aa10.59□□□□□ -0.71
CDRT1-203ENST00000395667 KIF2AO00139 706 aaPredicted RBP10.59□□□□□ -0.71
CDRT1-203ENST00000395667 SF3B3Q15393 1217 aaKnown RBP10.59□□□□□ -0.71
CDRT1-203ENST00000395667 HSP90AA4PQ58FG1 418 aa10.59□□□□□ -0.71
CDRT1-203ENST00000395667 DPF2Q92785 391 aa10.59□□□□□ -0.71
CDRT1-203ENST00000395667 SMARCE1Q969G3 411 aa10.59□□□□□ -0.71
CDRT1-203ENST00000395667 FAM84BQ96KN1 310 aaPredicted RBP10.59□□□□□ -0.71
CDRT1-203ENST00000395667 SPATA31A5Q5VU36 1347 aa10.59□□□□□ -0.71
CDRT1-203ENST00000395667 SPATA31A7Q8IWB4 1347 aa10.59□□□□□ -0.71
CDRT1-203ENST00000395667 TRIM75PA6NK02 468 aa10.59□□□□□ -0.71
CDRT1-203ENST00000395667 E4F1Q66K89 784 aaPredicted RBP10.59□□□□□ -0.71
CDRT1-203ENST00000395667 CELF1Q92879 486 aaKnown RBP10.59□□□□□ -0.71
CDRT1-203ENST00000395667 V9GY48 417 aaPredicted RBP10.59□□□□□ -0.71
CDRT1-203ENST00000395667 BCL9LQ86UU0 1499 aa10.59□□□□□ -0.71
CDRT1-203ENST00000395667 MYH6P13533 1939 aa10.59□□□□□ -0.71
CDRT1-203ENST00000395667 TOP1P11387 765 aaKnown RBP10.58□□□□□ -0.72
CDRT1-203ENST00000395667 CDK11BP21127 795 aaKnown RBP10.58□□□□□ -0.72
CDRT1-203ENST00000395667 KRT2P35908 639 aa10.58□□□□□ -0.72
CDRT1-203ENST00000395667 LINC00116Q8NCU8 138 aa10.58□□□□□ -0.72
CDRT1-203ENST00000395667 BRIP1Q9BX63 1249 aa10.58□□□□□ -0.72
CDRT1-203ENST00000395667 MAN1B1Q9UKM7 699 aa10.58□□□□□ -0.72
CDRT1-203ENST00000395667 SRPRBQ9Y5M8 271 aaKnown RBP10.58□□□□□ -0.72
CDRT1-203ENST00000395667 BAZ2AQ9UIF9 1905 aaKnown RBP10.58□□□□□ -0.72
CDRT1-203ENST00000395667 COL22A1Q8NFW1 1626 aaPredicted RBP10.58□□□□□ -0.72
CDRT1-203ENST00000395667 TAF1P21675 1872 aa10.58□□□□□ -0.72
CDRT1-203ENST00000395667 COL1A1P02452 1464 aaPredicted RBP10.58□□□□□ -0.72
CDRT1-203ENST00000395667 USP17L12C9JPN9 530 aa10.58□□□□□ -0.72
CDRT1-203ENST00000395667 USP17L21D6R901 530 aa10.58□□□□□ -0.72
CDRT1-203ENST00000395667 PLEKHA8P1O95397 391 aa10.58□□□□□ -0.72
CDRT1-203ENST00000395667 PRR29P0C7W0 189 aa10.58□□□□□ -0.72
CDRT1-203ENST00000395667 MDM2Q00987 491 aaPredicted RBP10.58□□□□□ -0.72
CDRT1-203ENST00000395667 PDE4BQ07343 736 aa10.58□□□□□ -0.72
CDRT1-203ENST00000395667 NAA30Q147X3 362 aaPredicted RBP10.58□□□□□ -0.72
CDRT1-203ENST00000395667 SYCP1Q15431 976 aa10.58□□□□□ -0.72
CDRT1-203ENST00000395667 GRAMD1CQ8IYS0 662 aa10.58□□□□□ -0.72
CDRT1-203ENST00000395667 ZNF579Q8NAF0 562 aaKnown RBP10.58□□□□□ -0.72
CDRT1-203ENST00000395667 CCDC34Q96HJ3 373 aa10.58□□□□□ -0.72
CDRT1-203ENST00000395667 PPP1R13BQ96KQ4 1090 aa10.58□□□□□ -0.72
CDRT1-203ENST00000395667 CSRNP2Q9H175 543 aa10.58□□□□□ -0.72
CDRT1-203ENST00000395667 BRMS1Q9HCU9 246 aa10.58□□□□□ -0.72
CDRT1-203ENST00000395667 KCND1Q9NSA2 647 aa10.58□□□□□ -0.72
CDRT1-203ENST00000395667 DACH1Q9UI36 760 aa10.58□□□□□ -0.72
CDRT1-203ENST00000395667 COL4A1P02462 1669 aa10.58□□□□□ -0.72
CDRT1-203ENST00000395667 BAZ2BQ9UIF8 2168 aaKnown RBP10.58□□□□□ -0.72
CDRT1-203ENST00000395667 AHDC1Q5TGY3 1603 aaPredicted RBP10.58□□□□□ -0.72
CDRT1-203ENST00000395667 FAM205CA6NFA0 338 aa10.58□□□□□ -0.72
CDRT1-203ENST00000395667 MYO1BO43795 1136 aa10.58□□□□□ -0.72
CDRT1-203ENST00000395667 BMP6P22004 513 aa10.58□□□□□ -0.72
CDRT1-203ENST00000395667 PTPN21Q16825 1174 aa10.58□□□□□ -0.72
CDRT1-203ENST00000395667 ZNF827Q17R98 1081 aa10.58□□□□□ -0.72
CDRT1-203ENST00000395667 KANK3Q6NY19 840 aa10.58□□□□□ -0.72
CDRT1-203ENST00000395667 SMIM5Q71RC9 77 aa10.58□□□□□ -0.72
CDRT1-203ENST00000395667 HOMER1Q86YM7 354 aa10.58□□□□□ -0.72
CDRT1-203ENST00000395667 RBM28Q9NW13 759 aaKnown RBP10.58□□□□□ -0.72
CDRT1-203ENST00000395667 LAMB2P55268 1798 aa10.57□□□□□ -0.72
CDRT1-203ENST00000395667 PSDA5PKW4 1024 aaPredicted RBP10.57□□□□□ -0.72
CDRT1-203ENST00000395667 TBC1D9BQ66K14 1250 aa10.57□□□□□ -0.72
CDRT1-203ENST00000395667 USP49Q70CQ1 688 aa10.57□□□□□ -0.72
CDRT1-203ENST00000395667 ELOA2Q8IYF1 753 aaPredicted RBP10.57□□□□□ -0.72
CDRT1-203ENST00000395667 MLKLQ8NB16 471 aa10.57□□□□□ -0.72
CDRT1-203ENST00000395667 AATFQ9NY61 560 aaKnown RBP eCLIP10.57□□□□□ -0.72
CDRT1-203ENST00000395667 TFCP2L1Q9NZI6 479 aa10.57□□□□□ -0.72
CDRT1-203ENST00000395667 TMEM232C9JQI7 657 aa10.57□□□□□ -0.72
CDRT1-203ENST00000395667 PRPF3O43395 683 aaKnown RBP10.57□□□□□ -0.72
CDRT1-203ENST00000395667 CALM1P0DP23 149 aa10.57□□□□□ -0.72
CDRT1-203ENST00000395667 CALM2P0DP24 149 aa10.57□□□□□ -0.72
CDRT1-203ENST00000395667 CALM3P0DP25 149 aa10.57□□□□□ -0.72
CDRT1-203ENST00000395667 KLRK1P26718 216 aa10.57□□□□□ -0.72
CDRT1-203ENST00000395667 RPS8P62241 208 aaKnown RBP10.57□□□□□ -0.72
CDRT1-203ENST00000395667 CBX1P83916 185 aa10.57□□□□□ -0.72
CDRT1-203ENST00000395667 CTR9Q6PD62 1173 aa10.57□□□□□ -0.72
CDRT1-203ENST00000395667 VSTM4Q8IW00 320 aa10.57□□□□□ -0.72
CDRT1-203ENST00000395667 DHX58Q96C10 678 aa10.57□□□□□ -0.72
CDRT1-203ENST00000395667 NLRP3Q96P20 1036 aa10.57□□□□□ -0.72
CDRT1-203ENST00000395667 CRNKL1Q9BZJ0 848 aaKnown RBP10.57□□□□□ -0.72
CDRT1-203ENST00000395667 ZNF215Q9UL58 517 aaPredicted RBP10.57□□□□□ -0.72
CDRT1-203ENST00000395667 NFE2L3Q9Y4A8 694 aa10.57□□□□□ -0.72
CDRT1-203ENST00000395667 CICQ96RK0 1608 aaPredicted RBP10.56□□□□□ -0.72
CDRT1-203ENST00000395667 PCP11498 1178 aaKnown RBP10.56□□□□□ -0.72
CDRT1-203ENST00000395667 MECOMQ03112 1051 aa10.56□□□□□ -0.72
CDRT1-203ENST00000395667 PKN1Q16512 942 aa10.56□□□□□ -0.72
CDRT1-203ENST00000395667 FAM98CQ17RN3 349 aaKnown RBP10.56□□□□□ -0.72
CDRT1-203ENST00000395667 SYT10Q6XYQ8 523 aa10.56□□□□□ -0.72
CDRT1-203ENST00000395667 BARGINQ6ZT62 677 aa10.56□□□□□ -0.72
CDRT1-203ENST00000395667 NBPF5PQ86XG9 351 aaPredicted RBP10.56□□□□□ -0.72
CDRT1-203ENST00000395667 TRMT44Q8IYL2 757 aaKnown RBP10.56□□□□□ -0.72
CDRT1-203ENST00000395667 CTCFLQ8NI51 663 aaPredicted RBP10.56□□□□□ -0.72
CDRT1-203ENST00000395667 ZNF384Q8TF68 577 aa10.56□□□□□ -0.72
CDRT1-203ENST00000395667 NOL10Q9BSC4 688 aaKnown RBP10.56□□□□□ -0.72
CDRT1-203ENST00000395667 NOL12Q9UGY1 213 aaKnown RBP eCLIP10.56□□□□□ -0.72
CDRT1-203ENST00000395667 V9GYY5 206 aaPredicted RBP10.56□□□□□ -0.72
CDRT1-203ENST00000395667 RREB1Q92766 1687 aa10.56□□□□□ -0.72
CDRT1-203ENST00000395667 SPDYE4A6NLX3 237 aa10.56□□□□□ -0.72
CDRT1-203ENST00000395667 NPHP1O15259 732 aa10.56□□□□□ -0.72
CDRT1-203ENST00000395667 CCP110O43303 1012 aa10.56□□□□□ -0.72
CDRT1-203ENST00000395667 HIBADHP31937 336 aaKnown RBP10.56□□□□□ -0.72
CDRT1-203ENST00000395667 KCNJ6P48051 423 aa10.56□□□□□ -0.72
CDRT1-203ENST00000395667 GOLGA8FQ08AF8 430 aa10.56□□□□□ -0.72
CDRT1-203ENST00000395667 GOLGA8DPQ0D2H9 430 aa10.56□□□□□ -0.72
CDRT1-203ENST00000395667 FBXO33Q7Z6M2 555 aa10.56□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms