RNA–Protein interactions for RNA: ENST00000395418.7

IFT20-203, Transcript of intraflagellar transport 20, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene IFT20, Length 825 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT20-203ENST00000395418 COL6A1P12109 1028 aa18.85■□□□□ 0.61
IFT20-203ENST00000395418 MDM2Q00987 491 aaPredicted RBP18.85■□□□□ 0.61
IFT20-203ENST00000395418 PDE3AQ14432 1141 aa18.85■□□□□ 0.61
IFT20-203ENST00000395418 Q3C1V9 767 aa18.85■□□□□ 0.61
IFT20-203ENST00000395418 SH3RF3Q8TEJ3 882 aaPredicted RBP18.85■□□□□ 0.61
IFT20-203ENST00000395418 SRGAP3O43295 1099 aa18.84■□□□□ 0.61
IFT20-203ENST00000395418 ASNSP08243 561 aa18.84■□□□□ 0.61
IFT20-203ENST00000395418 ZKSCAN1P17029 563 aaPredicted RBP18.84■□□□□ 0.61
IFT20-203ENST00000395418 CCND3P30281 292 aaPredicted RBP18.84■□□□□ 0.61
IFT20-203ENST00000395418 MAPK4P31152 587 aa18.84■□□□□ 0.61
IFT20-203ENST00000395418 JAG1P78504 1218 aa18.84■□□□□ 0.61
IFT20-203ENST00000395418 CCL14Q16627 93 aa18.84■□□□□ 0.61
IFT20-203ENST00000395418 LRRC26Q2I0M4 334 aa18.84■□□□□ 0.61
IFT20-203ENST00000395418 CCAR1Q8IX12 1150 aaKnown RBP18.84■□□□□ 0.61
IFT20-203ENST00000395418 TRMT44Q8IYL2 757 aaKnown RBP18.84■□□□□ 0.61
IFT20-203ENST00000395418 CDCA7LQ96GN5 454 aa18.84■□□□□ 0.61
IFT20-203ENST00000395418 NOL10Q9BSC4 688 aaKnown RBP18.84■□□□□ 0.61
IFT20-203ENST00000395418 DHX36Q9H2U1 1008 aaKnown RBP18.84■□□□□ 0.61
IFT20-203ENST00000395418 LRP2BPQ9P2M1 347 aa18.84■□□□□ 0.61
IFT20-203ENST00000395418 RBPJLQ9UBG7 517 aa18.84■□□□□ 0.61
IFT20-203ENST00000395418 C19orf81C9J6K1 198 aa18.83■□□□□ 0.6
IFT20-203ENST00000395418 USP17L10C9JJH3 530 aa18.83■□□□□ 0.6
IFT20-203ENST00000395418 LHX8Q68G74 356 aa18.83■□□□□ 0.6
IFT20-203ENST00000395418 PAGR1Q9BTK6 254 aa18.83■□□□□ 0.6
IFT20-203ENST00000395418 API5Q9BZZ5 524 aaKnown RBP18.83■□□□□ 0.6
IFT20-203ENST00000395418 PORCNQ9H237 461 aa18.83■□□□□ 0.6
IFT20-203ENST00000395418 AATFQ9NY61 560 aaKnown RBP eCLIP18.83■□□□□ 0.6
IFT20-203ENST00000395418 GDF11O95390 407 aa18.82■□□□□ 0.6
IFT20-203ENST00000395418 ARID4AP29374 1257 aaPredicted RBP18.82■□□□□ 0.6
IFT20-203ENST00000395418 RGS2P41220 211 aa18.82■□□□□ 0.6
IFT20-203ENST00000395418 MCAMP43121 646 aa18.82■□□□□ 0.6
IFT20-203ENST00000395418 ERVK-9P63128 1117 aa18.82■□□□□ 0.6
IFT20-203ENST00000395418 ERVK-24P63145 666 aa18.82■□□□□ 0.6
IFT20-203ENST00000395418 SHROOM1Q2M3G4 852 aaPredicted RBP18.82■□□□□ 0.6
IFT20-203ENST00000395418 GPR142Q7Z601 462 aa18.82■□□□□ 0.6
IFT20-203ENST00000395418 USP6NLQ92738 828 aa18.82■□□□□ 0.6
IFT20-203ENST00000395418 COL25A1Q9BXS0 654 aaPredicted RBP18.82■□□□□ 0.6
IFT20-203ENST00000395418 MORN1Q5T089 497 aa18.81■□□□□ 0.6
IFT20-203ENST00000395418 PLEKHH3Q7Z736 793 aa18.81■□□□□ 0.6
IFT20-203ENST00000395418 MAPKAPK5Q8IW41 473 aa18.81■□□□□ 0.6
IFT20-203ENST00000395418 CRACR2BQ8N4Y2 399 aaPredicted RBP18.81■□□□□ 0.6
IFT20-203ENST00000395418 TGFBRAP1Q8WUH2 860 aa18.81■□□□□ 0.6
IFT20-203ENST00000395418 DNAJC18Q9H819 358 aa18.81■□□□□ 0.6
IFT20-203ENST00000395418 LTBP2Q14767 1821 aa18.8■□□□□ 0.6
IFT20-203ENST00000395418 BAG3O95817 575 aa18.8■□□□□ 0.6
IFT20-203ENST00000395418 FOXP4Q8IVH2 680 aaPredicted RBP18.8■□□□□ 0.6
IFT20-203ENST00000395418 TRIM34Q9BYJ4 488 aa18.8■□□□□ 0.6
IFT20-203ENST00000395418 CWC22Q9HCG8 908 aaKnown RBP18.8■□□□□ 0.6
IFT20-203ENST00000395418 RLFQ13129 1914 aa18.8■□□□□ 0.6
IFT20-203ENST00000395418 POTEB2H3BUK9 544 aa18.79■□□□□ 0.6
IFT20-203ENST00000395418 GNAI3P08754 354 aa18.79■□□□□ 0.6
IFT20-203ENST00000395418 MTX1Q13505 466 aa18.79■□□□□ 0.6
IFT20-203ENST00000395418 NAA16Q6N069 864 aaPredicted RBP18.79■□□□□ 0.6
IFT20-203ENST00000395418 POTEEQ6S8J3 1075 aa18.79■□□□□ 0.6
IFT20-203ENST00000395418 PHF6Q8IWS0 365 aaKnown RBP eCLIP18.79■□□□□ 0.6
IFT20-203ENST00000395418 FAM161BQ96MY7 647 aa18.79■□□□□ 0.6
IFT20-203ENST00000395418 APBA2Q99767 749 aa18.79■□□□□ 0.6
IFT20-203ENST00000395418 SENP6Q9GZR1 1112 aaPredicted RBP18.79■□□□□ 0.6
IFT20-203ENST00000395418 PALD1Q9ULE6 856 aa18.79■□□□□ 0.6
IFT20-203ENST00000395418 EYSQ5T1H1 3165 aa18.79■□□□□ 0.6
IFT20-203ENST00000395418 FLT1P17948 1338 aa18.78■□□□□ 0.6
IFT20-203ENST00000395418 UQCRFS1P1P0C7P4 283 aa18.78■□□□□ 0.6
IFT20-203ENST00000395418 PLCG2P16885 1265 aa18.78■□□□□ 0.6
IFT20-203ENST00000395418 METTL16Q86W50 562 aaKnown RBP18.78■□□□□ 0.6
IFT20-203ENST00000395418 GTF3C2Q8WUA4 911 aaPredicted RBP18.78■□□□□ 0.6
IFT20-203ENST00000395418 EDC3Q96F86 508 aaKnown RBP18.78■□□□□ 0.6
IFT20-203ENST00000395418 GUCD1Q96NT3 240 aa18.78■□□□□ 0.6
IFT20-203ENST00000395418 SNRKQ9NRH2 765 aa18.78■□□□□ 0.6
IFT20-203ENST00000395418 EMILIN3Q9NT22 766 aa18.78■□□□□ 0.6
IFT20-203ENST00000395418 ZBTB21Q9ULJ3 1066 aa18.78■□□□□ 0.6
IFT20-203ENST00000395418 NDUFB9Q9Y6M9 179 aa18.78■□□□□ 0.6
IFT20-203ENST00000395418 ZNFX1Q9P2E3 1918 aaKnown RBP18.77■□□□□ 0.6
IFT20-203ENST00000395418 PPP4CP60510 307 aa18.77■□□□□ 0.6
IFT20-203ENST00000395418 MAP2K5Q13163 448 aa18.77■□□□□ 0.6
IFT20-203ENST00000395418 G3BP1Q13283 466 aaKnown RBP eCLIP18.77■□□□□ 0.6
IFT20-203ENST00000395418 FAM109BQ6ICB4 259 aaPredicted RBP18.77■□□□□ 0.6
IFT20-203ENST00000395418 USP17L2Q6R6M4 530 aa18.77■□□□□ 0.6
IFT20-203ENST00000395418 ADGRA1Q86SQ6 560 aa18.77■□□□□ 0.6
IFT20-203ENST00000395418 TRMT2AQ8IZ69 625 aaKnown RBP18.77■□□□□ 0.6
IFT20-203ENST00000395418 LBHD1Q9BQE6 289 aaPredicted RBP18.77■□□□□ 0.6
IFT20-203ENST00000395418 GINM1Q9NU53 330 aa18.77■□□□□ 0.6
IFT20-203ENST00000395418 CT47B1P0C2W7 299 aaPredicted RBP18.76■□□□□ 0.59
IFT20-203ENST00000395418 ZYXQ15942 572 aaKnown RBP18.76■□□□□ 0.59
IFT20-203ENST00000395418 WDR78Q5VTH9 848 aa18.76■□□□□ 0.59
IFT20-203ENST00000395418 FLRT1Q9NZU1 646 aa18.76■□□□□ 0.59
IFT20-203ENST00000395418 SAP30BPQ9UHR5 308 aaKnown RBP18.76■□□□□ 0.59
IFT20-203ENST00000395418 ZNF316A6NFI3 1004 aaPredicted RBP18.75■□□□□ 0.59
IFT20-203ENST00000395418 CNGA1P29973 690 aa18.75■□□□□ 0.59
IFT20-203ENST00000395418 ATN1P54259 1190 aaPredicted RBP18.75■□□□□ 0.59
IFT20-203ENST00000395418 TTC39AQ5SRH9 613 aa18.75■□□□□ 0.59
IFT20-203ENST00000395418 MFSD14CQ5VZR4 134 aa18.75■□□□□ 0.59
IFT20-203ENST00000395418 RABGAP1Q9Y3P9 1069 aa18.75■□□□□ 0.59
IFT20-203ENST00000395418 PNMA6EA0A0J9YXQ4 647 aa18.74■□□□□ 0.59
IFT20-203ENST00000395418 CNMDO75829 334 aa18.74■□□□□ 0.59
IFT20-203ENST00000395418 GLRX3O76003 335 aaKnown RBP18.74■□□□□ 0.59
IFT20-203ENST00000395418 HLA-DOAP06340 250 aa18.74■□□□□ 0.59
IFT20-203ENST00000395418 CCNA1P78396 465 aa18.74■□□□□ 0.59
IFT20-203ENST00000395418 DDX20Q9UHI6 824 aaKnown RBP18.74■□□□□ 0.59
IFT20-203ENST00000395418 USP17L15C9J2P7 530 aa18.73■□□□□ 0.59
IFT20-203ENST00000395418 USP17L13C9JLJ4 530 aa18.73■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms