RNA–Protein interactions for RNA: ENST00000395134.3

PFDN6-205, Transcript of prefoldin subunit 6, humanhuman

TSL 2

Gene PFDN6, Length 805 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN6-205ENST00000395134 MINDY4BA8MYZ0 360 aa11.13□□□□□ -0.63
PFDN6-205ENST00000395134 LILRA1O75019 489 aa11.13□□□□□ -0.63
PFDN6-205ENST00000395134 VARSP26640 1264 aaKnown RBP11.13□□□□□ -0.63
PFDN6-205ENST00000395134 RC3H1Q5TC82 1133 aaKnown RBP11.13□□□□□ -0.63
PFDN6-205ENST00000395134 DNAJC10Q8IXB1 793 aa11.13□□□□□ -0.63
PFDN6-205ENST00000395134 ZNF296Q8WUU4 475 aaPredicted RBP11.13□□□□□ -0.63
PFDN6-205ENST00000395134 ANAPC16Q96DE5 110 aa11.13□□□□□ -0.63
PFDN6-205ENST00000395134 PHACTR1Q9C0D0 580 aa11.13□□□□□ -0.63
PFDN6-205ENST00000395134 PARP3Q9Y6F1 533 aa11.13□□□□□ -0.63
PFDN6-205ENST00000395134 DLEC1Q9Y238 1755 aa11.13□□□□□ -0.63
PFDN6-205ENST00000395134 COL3A1P02461 1466 aaPredicted RBP11.12□□□□□ -0.63
PFDN6-205ENST00000395134 PRC1O43663 620 aa11.12□□□□□ -0.63
PFDN6-205ENST00000395134 IL2RAP01589 272 aa11.12□□□□□ -0.63
PFDN6-205ENST00000395134 GBP2P32456 591 aaPredicted RBP11.12□□□□□ -0.63
PFDN6-205ENST00000395134 DDR1Q08345 913 aa11.12□□□□□ -0.63
PFDN6-205ENST00000395134 C16orf86Q6ZW13 317 aa11.12□□□□□ -0.63
PFDN6-205ENST00000395134 SNX29Q8TEQ0 813 aa11.12□□□□□ -0.63
PFDN6-205ENST00000395134 TMEM74Q96NL1 305 aa11.12□□□□□ -0.63
PFDN6-205ENST00000395134 CEP89Q96ST8 783 aa11.12□□□□□ -0.63
PFDN6-205ENST00000395134 SPOCK3Q9BQ16 436 aa11.12□□□□□ -0.63
PFDN6-205ENST00000395134 TTF2Q9UNY4 1162 aaKnown RBP11.12□□□□□ -0.63
PFDN6-205ENST00000395134 ANKRD31Q8N7Z5 1873 aa11.12□□□□□ -0.63
PFDN6-205ENST00000395134 USP42Q9H9J4 1324 aaKnown RBP11.11□□□□□ -0.63
PFDN6-205ENST00000395134 RNMTO43148 476 aaKnown RBP11.11□□□□□ -0.63
PFDN6-205ENST00000395134 IFRD2Q12894 506 aaPredicted RBP11.11□□□□□ -0.63
PFDN6-205ENST00000395134 MTHFSDQ2M296 383 aaKnown RBP11.11□□□□□ -0.63
PFDN6-205ENST00000395134 AKAP4Q5JQC9 854 aa11.11□□□□□ -0.63
PFDN6-205ENST00000395134 INTS5Q6P9B9 1019 aaKnown RBP11.11□□□□□ -0.63
PFDN6-205ENST00000395134 ARHGAP27Q6ZUM4 889 aa11.11□□□□□ -0.63
PFDN6-205ENST00000395134 FEZ1Q99689 392 aa11.11□□□□□ -0.63
PFDN6-205ENST00000395134 SLC52A2Q9HAB3 445 aa11.11□□□□□ -0.63
PFDN6-205ENST00000395134 NPHS2Q9NP85 383 aa11.11□□□□□ -0.63
PFDN6-205ENST00000395134 CNTN3Q9P232 1028 aa11.11□□□□□ -0.63
PFDN6-205ENST00000395134 DLG5Q8TDM6 1919 aa11.11□□□□□ -0.63
PFDN6-205ENST00000395134 COL11A2P13942 1736 aaPredicted RBP11.1□□□□□ -0.63
PFDN6-205ENST00000395134 DIAPH1O60610 1272 aaKnown RBP11.1□□□□□ -0.63
PFDN6-205ENST00000395134 VIL1P09327 827 aaKnown RBP11.1□□□□□ -0.63
PFDN6-205ENST00000395134 HCLS1P14317 486 aaPredicted RBP11.1□□□□□ -0.63
PFDN6-205ENST00000395134 CHRNA5P30532 468 aa11.1□□□□□ -0.63
PFDN6-205ENST00000395134 GSTT1P30711 240 aa11.1□□□□□ -0.63
PFDN6-205ENST00000395134 MAMSTRQ6ZN01 415 aa11.1□□□□□ -0.63
PFDN6-205ENST00000395134 ARHGEF10LQ9HCE6 1279 aa11.1□□□□□ -0.63
PFDN6-205ENST00000395134 HOMER2Q9NSB8 354 aa11.1□□□□□ -0.63
PFDN6-205ENST00000395134 WBP1LQ9NX94 342 aa11.1□□□□□ -0.63
PFDN6-205ENST00000395134 FCF1Q9Y324 198 aaKnown RBP11.1□□□□□ -0.63
PFDN6-205ENST00000395134 HRH3Q9Y5N1 445 aa11.1□□□□□ -0.63
PFDN6-205ENST00000395134 SCN7AQ01118 1682 aa11.1□□□□□ -0.63
PFDN6-205ENST00000395134 TIAM2Q8IVF5 1701 aa11.09□□□□□ -0.63
PFDN6-205ENST00000395134 NRXN2Q9P2S2 1712 aa11.09□□□□□ -0.63
PFDN6-205ENST00000395134 COL15A1P39059 1388 aa11.09□□□□□ -0.63
PFDN6-205ENST00000395134 MICAL2O94851 1124 aa11.09□□□□□ -0.63
PFDN6-205ENST00000395134 RHBDL3P58872 404 aa11.09□□□□□ -0.63
PFDN6-205ENST00000395134 TNNI3KQ59H18 835 aa11.09□□□□□ -0.63
PFDN6-205ENST00000395134 C1orf53Q5VUE5 145 aa11.09□□□□□ -0.63
PFDN6-205ENST00000395134 ZNF295-AS1Q8N0V1 137 aa11.09□□□□□ -0.63
PFDN6-205ENST00000395134 ZNF687Q8N1G0 1237 aa11.09□□□□□ -0.63
PFDN6-205ENST00000395134 CNKSR1Q969H4 720 aa11.09□□□□□ -0.63
PFDN6-205ENST00000395134 SGSM3Q96HU1 749 aa11.09□□□□□ -0.63
PFDN6-205ENST00000395134 C8orf48Q96LL4 319 aa11.09□□□□□ -0.63
PFDN6-205ENST00000395134 SRRTQ9BXP5 876 aaKnown RBP11.09□□□□□ -0.63
PFDN6-205ENST00000395134 KCNQ5Q9NR82 932 aa11.09□□□□□ -0.63
PFDN6-205ENST00000395134 BCCIPQ9P287 314 aaKnown RBP eCLIP11.09□□□□□ -0.63
PFDN6-205ENST00000395134 ZBTB1Q9Y2K1 713 aa11.09□□□□□ -0.63
PFDN6-205ENST00000395134 SOS1Q07889 1333 aaPredicted RBP11.09□□□□□ -0.63
PFDN6-205ENST00000395134 F6X3S4 739 aa11.08□□□□□ -0.64
PFDN6-205ENST00000395134 SMAD7O15105 426 aaKnown RBP11.08□□□□□ -0.64
PFDN6-205ENST00000395134 GADD45BO75293 160 aaPredicted RBP11.08□□□□□ -0.64
PFDN6-205ENST00000395134 ADD1P35611 737 aaKnown RBP11.08□□□□□ -0.64
PFDN6-205ENST00000395134 TGFB2P61812 414 aa11.08□□□□□ -0.64
PFDN6-205ENST00000395134 SQSTM1Q13501 440 aa11.08□□□□□ -0.64
PFDN6-205ENST00000395134 PCNX4Q63HM2 1172 aa11.08□□□□□ -0.64
PFDN6-205ENST00000395134 ADGRD1Q6QNK2 874 aa11.08□□□□□ -0.64
PFDN6-205ENST00000395134 CELF2-AS1Q8N7Q2 184 aa11.08□□□□□ -0.64
PFDN6-205ENST00000395134 EMID1Q96A84 441 aaPredicted RBP11.08□□□□□ -0.64
PFDN6-205ENST00000395134 ESYT1Q9BSJ8 1104 aa11.08□□□□□ -0.64
PFDN6-205ENST00000395134 POLRMTO00411 1230 aaKnown RBP11.07□□□□□ -0.64
PFDN6-205ENST00000395134 HRO43593 1189 aa11.07□□□□□ -0.64
PFDN6-205ENST00000395134 PHACTR2O75167 634 aa11.07□□□□□ -0.64
PFDN6-205ENST00000395134 CYP19A1P11511 503 aaPredicted RBP11.07□□□□□ -0.64
PFDN6-205ENST00000395134 MAP3K10Q02779 954 aa11.07□□□□□ -0.64
PFDN6-205ENST00000395134 CCDC85BQ15834 202 aaPredicted RBP11.07□□□□□ -0.64
PFDN6-205ENST00000395134 FBXL19Q6PCT2 694 aa11.07□□□□□ -0.64
PFDN6-205ENST00000395134 KRT26Q7Z3Y9 468 aa11.07□□□□□ -0.64
PFDN6-205ENST00000395134 PGBD3Q8N328 593 aa11.07□□□□□ -0.64
PFDN6-205ENST00000395134 SUV39H2Q9H5I1 410 aa11.07□□□□□ -0.64
PFDN6-205ENST00000395134 NMRK2Q9NPI5 230 aa11.07□□□□□ -0.64
PFDN6-205ENST00000395134 BCORQ6W2J9 1755 aa11.07□□□□□ -0.64
PFDN6-205ENST00000395134 CARMIL3Q8ND23 1372 aa11.06□□□□□ -0.64
PFDN6-205ENST00000395134 DICER1Q9UPY3 1922 aaKnown RBP11.06□□□□□ -0.64
PFDN6-205ENST00000395134 TNRC6CQ9HCJ0 1690 aaKnown RBP11.06□□□□□ -0.64
PFDN6-205ENST00000395134 POTEB2H3BUK9 544 aa11.06□□□□□ -0.64
PFDN6-205ENST00000395134 PDPK1O15530 556 aa11.06□□□□□ -0.64
PFDN6-205ENST00000395134 CREB3O43889 395 aa11.06□□□□□ -0.64
PFDN6-205ENST00000395134 RLBP1P12271 317 aa11.06□□□□□ -0.64
PFDN6-205ENST00000395134 KCNA3P22001 575 aa11.06□□□□□ -0.64
PFDN6-205ENST00000395134 FSHRP23945 695 aa11.06□□□□□ -0.64
PFDN6-205ENST00000395134 BIRC2Q13490 618 aa11.06□□□□□ -0.64
PFDN6-205ENST00000395134 ARID5BQ14865 1188 aa11.06□□□□□ -0.64
PFDN6-205ENST00000395134 DALRD3Q5D0E6 543 aaKnown RBP11.06□□□□□ -0.64
PFDN6-205ENST00000395134 BICDL1Q6ZP65 573 aa11.06□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms