RNA–Protein interactions for RNA: ENST00000395060.5

CLIP2-203, Transcript of CAP-Gly domain containing linker protein 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLIP2, Length 3,141 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP2-203ENST00000395060 ZNF532Q9HCE3 1301 aa16.28■□□□□ 0.2
CLIP2-203ENST00000395060 CTAGE9A4FU28 777 aa16.28■□□□□ 0.2
CLIP2-203ENST00000395060 SMIM22K7EJ46 135 aa16.28■□□□□ 0.2
CLIP2-203ENST00000395060 RNF225M0QZC1 329 aaPredicted RBP16.28■□□□□ 0.2
CLIP2-203ENST00000395060 MDM2Q00987 491 aaPredicted RBP16.28■□□□□ 0.2
CLIP2-203ENST00000395060 SRLQ86TD4 932 aa16.28■□□□□ 0.2
CLIP2-203ENST00000395060 GOLGA5Q8TBA6 731 aa16.28■□□□□ 0.2
CLIP2-203ENST00000395060 FAM217BQ9NTX9 383 aaPredicted RBP16.28■□□□□ 0.2
CLIP2-203ENST00000395060 KAT6BQ8WYB5 2073 aa16.27■□□□□ 0.2
CLIP2-203ENST00000395060 A0A087X0B3 334 aa16.27■□□□□ 0.2
CLIP2-203ENST00000395060 GOLGA6L9A6NEM1 432 aa16.27■□□□□ 0.2
CLIP2-203ENST00000395060 DHX8Q14562 1220 aaKnown RBP16.27■□□□□ 0.2
CLIP2-203ENST00000395060 AEBP2Q6ZN18 517 aaPredicted RBP16.27■□□□□ 0.2
CLIP2-203ENST00000395060 HDXQ7Z353 690 aa16.27■□□□□ 0.2
CLIP2-203ENST00000395060 FCHSD1Q86WN1 690 aa16.27■□□□□ 0.2
CLIP2-203ENST00000395060 NUP88Q99567 741 aaPredicted RBP16.27■□□□□ 0.2
CLIP2-203ENST00000395060 CNNM1Q9NRU3 951 aa16.27■□□□□ 0.2
CLIP2-203ENST00000395060 CDC23Q9UJX2 597 aa16.27■□□□□ 0.2
CLIP2-203ENST00000395060 PRKAB2O43741 272 aa16.27■□□□□ 0.19
CLIP2-203ENST00000395060 ZNF18P17022 549 aa16.27■□□□□ 0.19
CLIP2-203ENST00000395060 CASP8Q14790 479 aa16.27■□□□□ 0.19
CLIP2-203ENST00000395060 LDHAL6AQ6ZMR3 332 aa16.27■□□□□ 0.19
CLIP2-203ENST00000395060 AIDAQ96BJ3 306 aa16.27■□□□□ 0.19
CLIP2-203ENST00000395060 CTNND2Q9UQB3 1225 aa16.27■□□□□ 0.19
CLIP2-203ENST00000395060 LRRIQ3A6PVS8 624 aaPredicted RBP16.26■□□□□ 0.19
CLIP2-203ENST00000395060 NR1I3Q14994 352 aa16.26■□□□□ 0.19
CLIP2-203ENST00000395060 NOM1Q5C9Z4 860 aaKnown RBP16.26■□□□□ 0.19
CLIP2-203ENST00000395060 EXOC4Q96A65 974 aa16.26■□□□□ 0.19
CLIP2-203ENST00000395060 TAB2Q9NYJ8 693 aa16.26■□□□□ 0.19
CLIP2-203ENST00000395060 MYH15Q9Y2K3 1946 aa16.26■□□□□ 0.19
CLIP2-203ENST00000395060 FAM204AQ9H8W3 233 aa16.26■□□□□ 0.19
CLIP2-203ENST00000395060 ARMT1Q9H993 441 aa16.26■□□□□ 0.19
CLIP2-203ENST00000395060 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP16.26■□□□□ 0.19
CLIP2-203ENST00000395060 IQSEC3Q9UPP2 1182 aaPredicted RBP16.26■□□□□ 0.19
CLIP2-203ENST00000395060 AKAP2Q9Y2D5 859 aa16.26■□□□□ 0.19
CLIP2-203ENST00000395060 NTRK3Q16288 839 aa16.25■□□□□ 0.19
CLIP2-203ENST00000395060 MUM1L1Q5H9M0 696 aa16.25■□□□□ 0.19
CLIP2-203ENST00000395060 LY9Q9HBG7 655 aa16.25■□□□□ 0.19
CLIP2-203ENST00000395060 VPS54Q9P1Q0 977 aa16.25■□□□□ 0.19
CLIP2-203ENST00000395060 FBXO2Q9UK22 296 aaPredicted RBP16.25■□□□□ 0.19
CLIP2-203ENST00000395060 CTAGE15A4D2H0 777 aa16.25■□□□□ 0.19
CLIP2-203ENST00000395060 N4BP3O15049 544 aa16.25■□□□□ 0.19
CLIP2-203ENST00000395060 ATP8B1O43520 1251 aa16.25■□□□□ 0.19
CLIP2-203ENST00000395060 CTAGE8P0CG41 777 aa16.25■□□□□ 0.19
CLIP2-203ENST00000395060 CTAGE6Q86UF2 777 aa16.25■□□□□ 0.19
CLIP2-203ENST00000395060 CTAGE4Q8IX94 777 aa16.25■□□□□ 0.19
CLIP2-203ENST00000395060 MIGA1Q8NAN2 632 aa16.25■□□□□ 0.19
CLIP2-203ENST00000395060 MLKLQ8NB16 471 aa16.25■□□□□ 0.19
CLIP2-203ENST00000395060 ENOX1Q8TC92 643 aaKnown RBP16.25■□□□□ 0.19
CLIP2-203ENST00000395060 ZNF335Q9H4Z2 1342 aaPredicted RBP16.25■□□□□ 0.19
CLIP2-203ENST00000395060 SYNRGQ9UMZ2 1314 aa16.25■□□□□ 0.19
CLIP2-203ENST00000395060 MRC1P22897 1456 aa16.25■□□□□ 0.19
CLIP2-203ENST00000395060 IFIT5Q13325 482 aaKnown RBP16.25■□□□□ 0.19
CLIP2-203ENST00000395060 MORC3Q14149 939 aa16.25■□□□□ 0.19
CLIP2-203ENST00000395060 BRD3Q15059 726 aa16.25■□□□□ 0.19
CLIP2-203ENST00000395060 TTC19Q6DKK2 380 aaPredicted RBP16.25■□□□□ 0.19
CLIP2-203ENST00000395060 PPP1R3FQ6ZSY5 799 aaPredicted RBP16.25■□□□□ 0.19
CLIP2-203ENST00000395060 NAPBQ9H115 298 aa16.25■□□□□ 0.19
CLIP2-203ENST00000395060 POLD4Q9HCU8 107 aa16.25■□□□□ 0.19
CLIP2-203ENST00000395060 SLAIN2Q9P270 581 aa16.25■□□□□ 0.19
CLIP2-203ENST00000395060 TNS3Q68CZ2 1445 aa16.24■□□□□ 0.19
CLIP2-203ENST00000395060 WNT7AO00755 349 aa16.24■□□□□ 0.19
CLIP2-203ENST00000395060 ERLIN1O75477 346 aa16.24■□□□□ 0.19
CLIP2-203ENST00000395060 PHKA1P46020 1223 aa16.24■□□□□ 0.19
CLIP2-203ENST00000395060 ZNF174Q15697 407 aa16.24■□□□□ 0.19
CLIP2-203ENST00000395060 IGDCC4Q8TDY8 1250 aa16.24■□□□□ 0.19
CLIP2-203ENST00000395060 TRPM3Q9HCF6 1732 aaPredicted RBP16.24■□□□□ 0.19
CLIP2-203ENST00000395060 MAP2K7O14733 419 aa16.24■□□□□ 0.19
CLIP2-203ENST00000395060 GYPCP04921 128 aa16.24■□□□□ 0.19
CLIP2-203ENST00000395060 DPYDQ12882 1025 aa16.24■□□□□ 0.19
CLIP2-203ENST00000395060 DNAJC21Q5F1R6 531 aaKnown RBP16.24■□□□□ 0.19
CLIP2-203ENST00000395060 EARS2Q5JPH6 523 aaKnown RBP16.24■□□□□ 0.19
CLIP2-203ENST00000395060 CHP1Q99653 195 aa16.24■□□□□ 0.19
CLIP2-203ENST00000395060 DDX24Q9GZR7 859 aaKnown RBP eCLIP16.24■□□□□ 0.19
CLIP2-203ENST00000395060 TACC3Q9Y6A5 838 aa16.24■□□□□ 0.19
CLIP2-203ENST00000395060 ZFYP08048 801 aaPredicted RBP16.23■□□□□ 0.19
CLIP2-203ENST00000395060 PLCD1P51178 756 aa16.23■□□□□ 0.19
CLIP2-203ENST00000395060 CEP112Q8N8E3 955 aa16.23■□□□□ 0.19
CLIP2-203ENST00000395060 L1RE1Q9UN81 338 aa16.23■□□□□ 0.19
CLIP2-203ENST00000395060 CPDO75976 1380 aa16.23■□□□□ 0.19
CLIP2-203ENST00000395060 EIF3JO75822 258 aaKnown RBP16.23■□□□□ 0.19
CLIP2-203ENST00000395060 MBD4O95243 580 aa16.23■□□□□ 0.19
CLIP2-203ENST00000395060 ERVK-24P63145 666 aa16.23■□□□□ 0.19
CLIP2-203ENST00000395060 DACH1Q9UI36 760 aa16.23■□□□□ 0.19
CLIP2-203ENST00000395060 MINDY4BA8MYZ0 360 aa16.23■□□□□ 0.19
CLIP2-203ENST00000395060 MFAP3LO75121 409 aa16.23■□□□□ 0.19
CLIP2-203ENST00000395060 MMP1P03956 469 aa16.23■□□□□ 0.19
CLIP2-203ENST00000395060 TRIM22Q8IYM9 498 aa16.23■□□□□ 0.19
CLIP2-203ENST00000395060 A0A1B0GTH6 734 aa16.22■□□□□ 0.19
CLIP2-203ENST00000395060 ACTN4O43707 911 aaKnown RBP16.22■□□□□ 0.19
CLIP2-203ENST00000395060 PTPREP23469 700 aa16.22■□□□□ 0.19
CLIP2-203ENST00000395060 RTN1Q16799 776 aa16.22■□□□□ 0.19
CLIP2-203ENST00000395060 MAGEB6Q8N7X4 407 aa16.22■□□□□ 0.19
CLIP2-203ENST00000395060 PLIN2Q99541 437 aa16.22■□□□□ 0.19
CLIP2-203ENST00000395060 NAPGQ99747 312 aaPredicted RBP16.22■□□□□ 0.19
CLIP2-203ENST00000395060 TSPYL1Q9H0U9 437 aa16.22■□□□□ 0.19
CLIP2-203ENST00000395060 GREM2Q9H772 168 aa16.22■□□□□ 0.19
CLIP2-203ENST00000395060 EIF4ENIF1Q9NRA8 985 aaKnown RBP16.22■□□□□ 0.19
CLIP2-203ENST00000395060 BAZ2BQ9UIF8 2168 aaKnown RBP16.22■□□□□ 0.19
CLIP2-203ENST00000395060 ADD2P35612 726 aa16.22■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms