RNA–Protein interactions for RNA: ENST00000394768.6

SYNE2-205, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 1 (best)

Gene SYNE2, Length 11,095 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-205ENST00000394768 HS1BP3Q53T59 392 aa8.23□□□□□ -1.09
SYNE2-205ENST00000394768 HHATQ5VTY9 493 aa8.23□□□□□ -1.09
SYNE2-205ENST00000394768 DUOX2Q9NRD8 1548 aa8.23□□□□□ -1.09
SYNE2-205ENST00000394768 KRT26Q7Z3Y9 468 aa8.23□□□□□ -1.09
SYNE2-205ENST00000394768 LMCD1Q9NZU5 365 aa8.23□□□□□ -1.09
SYNE2-205ENST00000394768 DNAI1Q9UI46 699 aa8.23□□□□□ -1.09
SYNE2-205ENST00000394768 H7C1D1 291 aa8.22□□□□□ -1.09
SYNE2-205ENST00000394768 ASPHQ12797 758 aa8.22□□□□□ -1.09
SYNE2-205ENST00000394768 ATP2C2O75185 946 aa8.22□□□□□ -1.09
SYNE2-205ENST00000394768 SLC1A4P43007 532 aa8.22□□□□□ -1.09
SYNE2-205ENST00000394768 MICAL1Q8TDZ2 1067 aa8.22□□□□□ -1.09
SYNE2-205ENST00000394768 RSAD2Q8WXG1 361 aa8.22□□□□□ -1.09
SYNE2-205ENST00000394768 DCAF5Q96JK2 942 aa8.22□□□□□ -1.09
SYNE2-205ENST00000394768 SOS2Q07890 1332 aaPredicted RBP8.22□□□□□ -1.09
SYNE2-205ENST00000394768 PTPDC1A2A3K4 754 aa8.22□□□□□ -1.09
SYNE2-205ENST00000394768 EFCAB14O75071 495 aa8.22□□□□□ -1.09
SYNE2-205ENST00000394768 DENND2CQ68D51 928 aa8.22□□□□□ -1.09
SYNE2-205ENST00000394768 CTTNBP2Q8WZ74 1663 aa8.22□□□□□ -1.09
SYNE2-205ENST00000394768 SPDYE16A6NNV3 312 aaPredicted RBP8.22□□□□□ -1.09
SYNE2-205ENST00000394768 CCNA1P78396 465 aa8.22□□□□□ -1.09
SYNE2-205ENST00000394768 PUM3Q15397 648 aaKnown RBP8.22□□□□□ -1.09
SYNE2-205ENST00000394768 HADHQ16836 314 aaKnown RBP8.22□□□□□ -1.09
SYNE2-205ENST00000394768 SPDYE2Q495Y8 402 aa8.22□□□□□ -1.09
SYNE2-205ENST00000394768 CCDC38Q502W7 563 aa8.22□□□□□ -1.09
SYNE2-205ENST00000394768 KRT25Q7Z3Z0 450 aa8.22□□□□□ -1.09
SYNE2-205ENST00000394768 LLPHQ9BRT6 129 aaKnown RBP8.22□□□□□ -1.09
SYNE2-205ENST00000394768 ANGPTL3Q9Y5C1 460 aa8.22□□□□□ -1.09
SYNE2-205ENST00000394768 GARSP41250 739 aaKnown RBP8.22□□□□□ -1.09
SYNE2-205ENST00000394768 RINT1Q6NUQ1 792 aa8.22□□□□□ -1.09
SYNE2-205ENST00000394768 SRRM1Q8IYB3 904 aaKnown RBP8.22□□□□□ -1.09
SYNE2-205ENST00000394768 ABI1Q8IZP0 508 aa8.22□□□□□ -1.09
SYNE2-205ENST00000394768 RHPN1Q8TCX5 695 aa8.22□□□□□ -1.09
SYNE2-205ENST00000394768 KIF21AQ7Z4S6 1674 aa8.22□□□□□ -1.09
SYNE2-205ENST00000394768 THOC2Q8NI27 1593 aaKnown RBP8.22□□□□□ -1.09
SYNE2-205ENST00000394768 FLT4P35916 1363 aa8.22□□□□□ -1.09
SYNE2-205ENST00000394768 PHLDB3Q6NSJ2 640 aa8.22□□□□□ -1.09
SYNE2-205ENST00000394768 RAB44Q7Z6P3 723 aaPredicted RBP8.22□□□□□ -1.09
SYNE2-205ENST00000394768 SMC5Q8IY18 1101 aa8.22□□□□□ -1.09
SYNE2-205ENST00000394768 GCNAQ96QF7 691 aa8.22□□□□□ -1.09
SYNE2-205ENST00000394768 TEX12Q9BXU0 123 aa8.22□□□□□ -1.09
SYNE2-205ENST00000394768 TTC31Q49AM3 519 aaPredicted RBP8.22□□□□□ -1.09
SYNE2-205ENST00000394768 C1orf228Q6PIY5 440 aa8.22□□□□□ -1.09
SYNE2-205ENST00000394768 Q6ZUG5 572 aa8.22□□□□□ -1.09
SYNE2-205ENST00000394768 CDKL2Q92772 493 aa8.22□□□□□ -1.09
SYNE2-205ENST00000394768 TSPYL2Q9H2G4 693 aaPredicted RBP8.22□□□□□ -1.09
SYNE2-205ENST00000394768 TROVE2P10155 538 aaKnown RBP eCLIP8.22□□□□□ -1.09
SYNE2-205ENST00000394768 MAN1A1P33908 653 aa8.22□□□□□ -1.09
SYNE2-205ENST00000394768 KRT81Q14533 505 aa8.22□□□□□ -1.09
SYNE2-205ENST00000394768 ASIC3Q9UHC3 531 aa8.22□□□□□ -1.09
SYNE2-205ENST00000394768 SLC12A6Q9UHW9 1150 aa8.22□□□□□ -1.09
SYNE2-205ENST00000394768 STAM2O75886 525 aa8.22□□□□□ -1.09
SYNE2-205ENST00000394768 RIC8AQ9NPQ8 531 aa8.22□□□□□ -1.09
SYNE2-205ENST00000394768 GJA3Q9Y6H8 435 aa8.22□□□□□ -1.09
SYNE2-205ENST00000394768 WDR17Q8IZU2 1322 aa8.21□□□□□ -1.09
SYNE2-205ENST00000394768 GSTA1P08263 222 aa8.21□□□□□ -1.09
SYNE2-205ENST00000394768 GSTA2P09210 222 aa8.21□□□□□ -1.09
SYNE2-205ENST00000394768 TBC1D9Q6ZT07 1266 aa8.21□□□□□ -1.09
SYNE2-205ENST00000394768 SPATS2Q86XZ4 545 aaKnown RBP8.21□□□□□ -1.09
SYNE2-205ENST00000394768 RNF10Q8N5U6 811 aaKnown RBP8.21□□□□□ -1.09
SYNE2-205ENST00000394768 TNNC2P02585 160 aa8.21□□□□□ -1.09
SYNE2-205ENST00000394768 COG7P83436 770 aa8.21□□□□□ -1.09
SYNE2-205ENST00000394768 MPNDQ8N594 471 aa8.21□□□□□ -1.09
SYNE2-205ENST00000394768 BBOF1Q8ND07 529 aa8.21□□□□□ -1.09
SYNE2-205ENST00000394768 ADCY7P51828 1080 aa8.21□□□□□ -1.09
SYNE2-205ENST00000394768 CFAP221Q4G0U5 840 aa8.21□□□□□ -1.09
SYNE2-205ENST00000394768 ARHGAP30Q7Z6I6 1101 aaPredicted RBP8.21□□□□□ -1.09
SYNE2-205ENST00000394768 ARHGEF2Q92974 986 aaKnown RBP8.21□□□□□ -1.09
SYNE2-205ENST00000394768 ODR4Q5SWX8 454 aa8.21□□□□□ -1.1
SYNE2-205ENST00000394768 DHX32Q7L7V1 743 aaKnown RBP8.21□□□□□ -1.1
SYNE2-205ENST00000394768 EXOC4Q96A65 974 aa8.21□□□□□ -1.1
SYNE2-205ENST00000394768 TMEM247A6NEH6 219 aa8.21□□□□□ -1.1
SYNE2-205ENST00000394768 ARHGAP6O43182 974 aa8.21□□□□□ -1.1
SYNE2-205ENST00000394768 LMNB2Q03252 620 aa8.21□□□□□ -1.1
SYNE2-205ENST00000394768 TRIM42Q8IWZ5 723 aa8.21□□□□□ -1.1
SYNE2-205ENST00000394768 SNRKQ9NRH2 765 aa8.21□□□□□ -1.1
SYNE2-205ENST00000394768 TTLL3Q9Y4R7 772 aa8.21□□□□□ -1.1
SYNE2-205ENST00000394768 SP4Q02446 784 aa8.21□□□□□ -1.1
SYNE2-205ENST00000394768 DACT3Q96B18 629 aaPredicted RBP8.21□□□□□ -1.1
SYNE2-205ENST00000394768 TTC4O95801 387 aa8.21□□□□□ -1.1
SYNE2-205ENST00000394768 ZNF131P52739 623 aa8.21□□□□□ -1.1
SYNE2-205ENST00000394768 RNF168Q8IYW5 571 aaPredicted RBP8.21□□□□□ -1.1
SYNE2-205ENST00000394768 NDUFAF2Q8N183 169 aa8.21□□□□□ -1.1
SYNE2-205ENST00000394768 TRIM27P14373 513 aa8.2□□□□□ -1.1
SYNE2-205ENST00000394768 HDAC1Q13547 482 aaPredicted RBP8.2□□□□□ -1.1
SYNE2-205ENST00000394768 AKNAD1Q5T1N1 836 aa8.2□□□□□ -1.1
SYNE2-205ENST00000394768 SLFN12Q8IYM2 578 aa8.2□□□□□ -1.1
SYNE2-205ENST00000394768 CHURC1Q8WUH1 139 aa8.2□□□□□ -1.1
SYNE2-205ENST00000394768 ZSWIM4Q9H7M6 989 aa8.2□□□□□ -1.1
SYNE2-205ENST00000394768 HESX1Q9UBX0 185 aa8.2□□□□□ -1.1
SYNE2-205ENST00000394768 CFAP74Q9C0B2 1584 aa8.2□□□□□ -1.1
SYNE2-205ENST00000394768 BUB1BO60566 1050 aaPredicted RBP8.2□□□□□ -1.1
SYNE2-205ENST00000394768 HARSP12081 509 aaKnown RBP8.2□□□□□ -1.1
SYNE2-205ENST00000394768 LINS1Q8NG48 757 aa8.2□□□□□ -1.1
SYNE2-205ENST00000394768 KRT12Q99456 494 aa8.2□□□□□ -1.1
SYNE2-205ENST00000394768 PAK2Q13177 524 aa8.2□□□□□ -1.1
SYNE2-205ENST00000394768 LARGE2Q8N3Y3 721 aa8.2□□□□□ -1.1
SYNE2-205ENST00000394768 USHBP1Q8N6Y0 703 aa8.2□□□□□ -1.1
SYNE2-205ENST00000394768 INTS4Q96HW7 963 aaKnown RBP8.2□□□□□ -1.1
SYNE2-205ENST00000394768 PCDHB13Q9Y5F0 798 aa8.2□□□□□ -1.1
SYNE2-205ENST00000394768 SYNRGQ9UMZ2 1314 aa8.2□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms