RNA–Protein interactions for RNA: ENST00000394419.8

ACTN1-203, Transcript of actinin alpha 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene ACTN1, Length 3,464 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-203ENST00000394419 TIGD1Q96MW7 591 aa12.01□□□□□ -0.49
ACTN1-203ENST00000394419 FAM217BQ9NTX9 383 aaPredicted RBP12.01□□□□□ -0.49
ACTN1-203ENST00000394419 RNF216Q9NWF9 866 aaPredicted RBP12.01□□□□□ -0.49
ACTN1-203ENST00000394419 PPP2R2CQ9Y2T4 447 aa12.01□□□□□ -0.49
ACTN1-203ENST00000394419 NMT2O60551 498 aa12.01□□□□□ -0.49
ACTN1-203ENST00000394419 IL6STP40189 918 aaPredicted RBP12.01□□□□□ -0.49
ACTN1-203ENST00000394419 DMTNQ08495 405 aa12.01□□□□□ -0.49
ACTN1-203ENST00000394419 NTRK3Q16288 839 aa12.01□□□□□ -0.49
ACTN1-203ENST00000394419 IGSF22Q8N9C0 903 aa12.01□□□□□ -0.49
ACTN1-203ENST00000394419 NUP88Q99567 741 aaPredicted RBP12.01□□□□□ -0.49
ACTN1-203ENST00000394419 VSTM4Q8IW00 320 aa12□□□□□ -0.49
ACTN1-203ENST00000394419 STX8Q9UNK0 236 aa12□□□□□ -0.49
ACTN1-203ENST00000394419 PSDA5PKW4 1024 aaPredicted RBP12□□□□□ -0.49
ACTN1-203ENST00000394419 ARID4AP29374 1257 aaPredicted RBP12□□□□□ -0.49
ACTN1-203ENST00000394419 USP5P45974 858 aa12□□□□□ -0.49
ACTN1-203ENST00000394419 TSR1Q2NL82 804 aaKnown RBP12□□□□□ -0.49
ACTN1-203ENST00000394419 SGMS1Q86VZ5 419 aa12□□□□□ -0.49
ACTN1-203ENST00000394419 MLKLQ8NB16 471 aa12□□□□□ -0.49
ACTN1-203ENST00000394419 SYMPKQ92797 1274 aaKnown RBP12□□□□□ -0.49
ACTN1-203ENST00000394419 IRX2Q9BZI1 471 aaPredicted RBP12□□□□□ -0.49
ACTN1-203ENST00000394419 MKNK2Q9HBH9 465 aa12□□□□□ -0.49
ACTN1-203ENST00000394419 VAT1LQ9HCJ6 419 aa12□□□□□ -0.49
ACTN1-203ENST00000394419 CTNND2Q9UQB3 1225 aa12□□□□□ -0.49
ACTN1-203ENST00000394419 CDHR2Q9BYE9 1310 aa12□□□□□ -0.49
ACTN1-203ENST00000394419 ARHGAP6O43182 974 aa11.99□□□□□ -0.49
ACTN1-203ENST00000394419 SEC31AO94979 1220 aaKnown RBP11.99□□□□□ -0.49
ACTN1-203ENST00000394419 TOB1P50616 345 aaPredicted RBP11.99□□□□□ -0.49
ACTN1-203ENST00000394419 BMS1Q14692 1282 aaKnown RBP11.99□□□□□ -0.49
ACTN1-203ENST00000394419 KANK3Q6NY19 840 aa11.99□□□□□ -0.49
ACTN1-203ENST00000394419 DZIP1Q86YF9 867 aaKnown RBP11.99□□□□□ -0.49
ACTN1-203ENST00000394419 MAP3K14Q99558 947 aa11.99□□□□□ -0.49
ACTN1-203ENST00000394419 MCM9Q9NXL9 1143 aa11.99□□□□□ -0.49
ACTN1-203ENST00000394419 ZNF652Q9Y2D9 606 aa11.99□□□□□ -0.49
ACTN1-203ENST00000394419 SOS2Q07890 1332 aaPredicted RBP11.99□□□□□ -0.49
ACTN1-203ENST00000394419 CAMTA1Q9Y6Y1 1673 aa11.99□□□□□ -0.49
ACTN1-203ENST00000394419 LOC102724428A0A0B4J2F2 783 aa11.99□□□□□ -0.49
ACTN1-203ENST00000394419 SIK1P57059 783 aa11.99□□□□□ -0.49
ACTN1-203ENST00000394419 MTF1Q14872 753 aa11.99□□□□□ -0.49
ACTN1-203ENST00000394419 GPIHBP1Q8IV16 184 aa11.99□□□□□ -0.49
ACTN1-203ENST00000394419 BPIFA3Q9BQP9 254 aa11.99□□□□□ -0.49
ACTN1-203ENST00000394419 GTPBP4Q9BZE4 634 aaKnown RBP11.99□□□□□ -0.49
ACTN1-203ENST00000394419 TEX33O43247 280 aa11.99□□□□□ -0.49
ACTN1-203ENST00000394419 PTPREP23469 700 aa11.99□□□□□ -0.49
ACTN1-203ENST00000394419 TXLNAP40222 546 aa11.99□□□□□ -0.49
ACTN1-203ENST00000394419 PTGDRQ13258 359 aa11.99□□□□□ -0.49
ACTN1-203ENST00000394419 TOGARAM2Q6ZUX3 1019 aa11.99□□□□□ -0.49
ACTN1-203ENST00000394419 ZSCAN10Q96SZ4 725 aaPredicted RBP11.99□□□□□ -0.49
ACTN1-203ENST00000394419 TUBE1Q9UJT0 475 aa11.99□□□□□ -0.49
ACTN1-203ENST00000394419 DDX41Q9UJV9 622 aaKnown RBP11.99□□□□□ -0.49
ACTN1-203ENST00000394419 TCRBV5S4A2TA0A5A2 114 aa11.98□□□□□ -0.49
ACTN1-203ENST00000394419 AKR1B15C9JRZ8 316 aaPredicted RBP11.98□□□□□ -0.49
ACTN1-203ENST00000394419 TTC38Q5R3I4 469 aa11.98□□□□□ -0.49
ACTN1-203ENST00000394419 VGLL2Q8N8G2 317 aa11.98□□□□□ -0.49
ACTN1-203ENST00000394419 RASGRP4Q8TDF6 673 aa11.98□□□□□ -0.49
ACTN1-203ENST00000394419 FOXP1Q9H334 677 aaPredicted RBP11.98□□□□□ -0.49
ACTN1-203ENST00000394419 ANKIB1Q9P2G1 1089 aa11.98□□□□□ -0.49
ACTN1-203ENST00000394419 SOWAHDA6NJG2 315 aa11.98□□□□□ -0.49
ACTN1-203ENST00000394419 KIF5CO60282 957 aa11.98□□□□□ -0.49
ACTN1-203ENST00000394419 NOM1Q5C9Z4 860 aaKnown RBP11.98□□□□□ -0.49
ACTN1-203ENST00000394419 ZNF569Q5MCW4 686 aa11.98□□□□□ -0.49
ACTN1-203ENST00000394419 HPSEQ9Y251 543 aa11.98□□□□□ -0.49
ACTN1-203ENST00000394419 BMP6P22004 513 aa11.98□□□□□ -0.49
ACTN1-203ENST00000394419 ERFEQ4G0M1 354 aa11.98□□□□□ -0.49
ACTN1-203ENST00000394419 ADGRA1Q86SQ6 560 aa11.98□□□□□ -0.49
ACTN1-203ENST00000394419 TICAM2Q86XR7 235 aa11.98□□□□□ -0.49
ACTN1-203ENST00000394419 ENAHQ8N8S7 591 aaPredicted RBP11.98□□□□□ -0.49
ACTN1-203ENST00000394419 GPKOWQ92917 476 aaPredicted RBP eCLIP11.98□□□□□ -0.49
ACTN1-203ENST00000394419 NOL10Q9BSC4 688 aaKnown RBP11.98□□□□□ -0.49
ACTN1-203ENST00000394419 FBXO2Q9UK22 296 aaPredicted RBP11.98□□□□□ -0.49
ACTN1-203ENST00000394419 SYNRGQ9UMZ2 1314 aa11.98□□□□□ -0.49
ACTN1-203ENST00000394419 WDR19Q8NEZ3 1342 aa11.97□□□□□ -0.49
ACTN1-203ENST00000394419 CCDC175P0C221 793 aa11.97□□□□□ -0.49
ACTN1-203ENST00000394419 CLCN6P51797 869 aa11.97□□□□□ -0.49
ACTN1-203ENST00000394419 PIP4K2BP78356 416 aa11.97□□□□□ -0.49
ACTN1-203ENST00000394419 FBXL16Q8N461 479 aa11.97□□□□□ -0.49
ACTN1-203ENST00000394419 TAB2Q9NYJ8 693 aa11.97□□□□□ -0.49
ACTN1-203ENST00000394419 TACC3Q9Y6A5 838 aa11.97□□□□□ -0.49
ACTN1-203ENST00000394419 RIC1Q4ADV7 1423 aa11.97□□□□□ -0.49
ACTN1-203ENST00000394419 CCDC194A0A1B0GVG4 234 aa11.97□□□□□ -0.49
ACTN1-203ENST00000394419 CYP2D6P10635 497 aa11.97□□□□□ -0.49
ACTN1-203ENST00000394419 PPP2R3AQ06190 1150 aa11.97□□□□□ -0.49
ACTN1-203ENST00000394419 SKIDA1Q1XH10 827 aa11.97□□□□□ -0.49
ACTN1-203ENST00000394419 STAG1Q8WVM7 1258 aa11.97□□□□□ -0.49
ACTN1-203ENST00000394419 WDR24Q96S15 920 aa11.97□□□□□ -0.49
ACTN1-203ENST00000394419 KAT14Q9H8E8 782 aa11.97□□□□□ -0.49
ACTN1-203ENST00000394419 EIF4ENIF1Q9NRA8 985 aaKnown RBP11.97□□□□□ -0.49
ACTN1-203ENST00000394419 RTL9Q8NET4 1388 aa11.97□□□□□ -0.49
ACTN1-203ENST00000394419 ERVV-1B6SEH8 477 aa11.96□□□□□ -0.49
ACTN1-203ENST00000394419 MCM6Q14566 821 aa11.96□□□□□ -0.49
ACTN1-203ENST00000394419 HEATR3Q7Z4Q2 680 aa11.96□□□□□ -0.49
ACTN1-203ENST00000394419 NBPF5PQ86XG9 351 aaPredicted RBP11.96□□□□□ -0.49
ACTN1-203ENST00000394419 SRPRBQ9Y5M8 271 aaKnown RBP11.96□□□□□ -0.49
ACTN1-203ENST00000394419 KCNQ2O43526 872 aa11.96□□□□□ -0.49
ACTN1-203ENST00000394419 ERCC3P19447 782 aa11.96□□□□□ -0.49
ACTN1-203ENST00000394419 PARP10Q53GL7 1025 aa11.96□□□□□ -0.49
ACTN1-203ENST00000394419 EARS2Q5JPH6 523 aaKnown RBP11.96□□□□□ -0.49
ACTN1-203ENST00000394419 AMOTL1Q8IY63 956 aa11.96□□□□□ -0.49
ACTN1-203ENST00000394419 ZNF34Q8IZ26 560 aa11.96□□□□□ -0.49
ACTN1-203ENST00000394419 CRNKL1Q9BZJ0 848 aaKnown RBP11.96□□□□□ -0.49
ACTN1-203ENST00000394419 COL5A2P05997 1499 aaPredicted RBP11.96□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms