RNA–Protein interactions for RNA: ENST00000394181.6

CLDND1-203, Transcript of claudin domain containing 1, humanhuman

TSL 1 (best) BASIC

Gene CLDND1, Length 2,170 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND1-203ENST00000394181 SCN9AQ15858 1988 aa22.17■■□□□ 1.14
CLDND1-203ENST00000394181 KRT40Q6A162 431 aa22.17■■□□□ 1.14
CLDND1-203ENST00000394181 APOBEC3HQ6NTF7 200 aaKnown RBP22.17■■□□□ 1.14
CLDND1-203ENST00000394181 CATIPQ7Z7H3 387 aa22.17■■□□□ 1.14
CLDND1-203ENST00000394181 SLC16A10Q8TF71 515 aa22.17■■□□□ 1.14
CLDND1-203ENST00000394181 PGBD1Q96JS3 809 aa22.17■■□□□ 1.14
CLDND1-203ENST00000394181 USP40Q9NVE5 1235 aa22.17■■□□□ 1.14
CLDND1-203ENST00000394181 ADAMTSL1Q8N6G6 1762 aa22.17■■□□□ 1.14
CLDND1-203ENST00000394181 NAV1Q8NEY1 1877 aa22.17■■□□□ 1.14
CLDND1-203ENST00000394181 WDHD1O75717 1129 aaPredicted RBP22.16■■□□□ 1.14
CLDND1-203ENST00000394181 PLEKHA8P1O95397 391 aa22.16■■□□□ 1.14
CLDND1-203ENST00000394181 KIAA2012Q0VF49 1180 aa22.16■■□□□ 1.14
CLDND1-203ENST00000394181 AMOTL1Q8IY63 956 aa22.16■■□□□ 1.14
CLDND1-203ENST00000394181 ELP1O95163 1332 aa22.16■■□□□ 1.14
CLDND1-203ENST00000394181 UTRNP46939 3433 aa22.16■■□□□ 1.14
CLDND1-203ENST00000394181 hCG_1642624A0A1W2PR95 340 aa22.16■■□□□ 1.14
CLDND1-203ENST00000394181 RASA1P20936 1047 aa22.16■■□□□ 1.14
CLDND1-203ENST00000394181 CDK8P49336 464 aa22.16■■□□□ 1.14
CLDND1-203ENST00000394181 STRIP1Q5VSL9 837 aa22.16■■□□□ 1.14
CLDND1-203ENST00000394181 YDJCA8MPS7 323 aa22.15■■□□□ 1.14
CLDND1-203ENST00000394181 KIF23Q02241 960 aaPredicted RBP22.15■■□□□ 1.14
CLDND1-203ENST00000394181 CDC42EP5Q6NZY7 148 aa22.15■■□□□ 1.14
CLDND1-203ENST00000394181 CRKP46108 304 aa22.15■■□□□ 1.14
CLDND1-203ENST00000394181 RCAN1P53805 252 aa22.15■■□□□ 1.14
CLDND1-203ENST00000394181 FUT2Q10981 343 aa22.15■■□□□ 1.14
CLDND1-203ENST00000394181 TEKT1Q969V4 418 aa22.15■■□□□ 1.14
CLDND1-203ENST00000394181 PPIP5K2O43314 1243 aa22.14■■□□□ 1.13
CLDND1-203ENST00000394181 LIG1P18858 919 aa22.14■■□□□ 1.13
CLDND1-203ENST00000394181 HHIPL2Q6UWX4 724 aa22.14■■□□□ 1.13
CLDND1-203ENST00000394181 C16orf86Q6ZW13 317 aa22.14■■□□□ 1.13
CLDND1-203ENST00000394181 ZNF444Q8N0Y2 327 aaPredicted RBP22.14■■□□□ 1.13
CLDND1-203ENST00000394181 PANK2Q9BZ23 570 aa22.14■■□□□ 1.13
CLDND1-203ENST00000394181 GRPEL1Q9HAV7 217 aa22.14■■□□□ 1.13
CLDND1-203ENST00000394181 CFAP45Q9UL16 551 aa22.14■■□□□ 1.13
CLDND1-203ENST00000394181 STK36Q9NRP7 1315 aa22.14■■□□□ 1.13
CLDND1-203ENST00000394181 CCDC196A0A1B0GTZ2 297 aa22.14■■□□□ 1.13
CLDND1-203ENST00000394181 TSPY3P0CV98 308 aa22.14■■□□□ 1.13
CLDND1-203ENST00000394181 TSPY8P0CW00 308 aa22.14■■□□□ 1.13
CLDND1-203ENST00000394181 SLURP2P0DP57 97 aa22.13■■□□□ 1.13
CLDND1-203ENST00000394181 CACNB3P54284 484 aa22.13■■□□□ 1.13
CLDND1-203ENST00000394181 NFIAQ12857 509 aa22.13■■□□□ 1.13
CLDND1-203ENST00000394181 CC2D2BQ6DHV5 1058 aa22.13■■□□□ 1.13
CLDND1-203ENST00000394181 SHISA4Q96DD7 197 aa22.13■■□□□ 1.13
CLDND1-203ENST00000394181 KCNJ14Q9UNX9 436 aa22.13■■□□□ 1.13
CLDND1-203ENST00000394181 DDX60LQ5H9U9 1706 aaKnown RBP22.12■■□□□ 1.13
CLDND1-203ENST00000394181 ZFPM1Q8IX07 1006 aa22.12■■□□□ 1.13
CLDND1-203ENST00000394181 RCOR1Q9UKL0 485 aa22.12■■□□□ 1.13
CLDND1-203ENST00000394181 CLIC4Q9Y696 253 aa22.12■■□□□ 1.13
CLDND1-203ENST00000394181 ECM29Q5VYK3 1845 aa22.12■■□□□ 1.13
CLDND1-203ENST00000394181 TRIM22Q8IYM9 498 aa22.12■■□□□ 1.13
CLDND1-203ENST00000394181 ZNF277Q9NRM2 450 aaPredicted RBP22.12■■□□□ 1.13
CLDND1-203ENST00000394181 DLEC1Q9Y238 1755 aa22.12■■□□□ 1.13
CLDND1-203ENST00000394181 DDAH1O94760 285 aa22.11■■□□□ 1.13
CLDND1-203ENST00000394181 L1TD1Q5T7N2 865 aaKnown RBP22.11■■□□□ 1.13
CLDND1-203ENST00000394181 ZNF396Q96N95 335 aaPredicted RBP22.11■■□□□ 1.13
CLDND1-203ENST00000394181 PKN1Q16512 942 aa22.11■■□□□ 1.13
CLDND1-203ENST00000394181 MYSM1Q5VVJ2 828 aa22.11■■□□□ 1.13
CLDND1-203ENST00000394181 SRBD1Q8N5C6 995 aaKnown RBP22.11■■□□□ 1.13
CLDND1-203ENST00000394181 ZDHHC15Q96MV8 337 aa22.11■■□□□ 1.13
CLDND1-203ENST00000394181 V9GY48 417 aaPredicted RBP22.11■■□□□ 1.13
CLDND1-203ENST00000394181 DEXIO95424 95 aa22.1■■□□□ 1.13
CLDND1-203ENST00000394181 RBM5P52756 815 aaKnown RBP eCLIP22.1■■□□□ 1.13
CLDND1-203ENST00000394181 CCDC93Q567U6 631 aa22.1■■□□□ 1.13
CLDND1-203ENST00000394181 DGKHQ86XP1 1220 aa22.1■■□□□ 1.13
CLDND1-203ENST00000394181 MRE11P49959 708 aa22.09■■□□□ 1.13
CLDND1-203ENST00000394181 CCDC183Q5T5S1 534 aa22.09■■□□□ 1.13
CLDND1-203ENST00000394181 LRSAM1Q6UWE0 723 aa22.09■■□□□ 1.13
CLDND1-203ENST00000394181 TMTC3Q6ZXV5 915 aa22.09■■□□□ 1.13
CLDND1-203ENST00000394181 CCDC125Q86Z20 511 aa22.09■■□□□ 1.13
CLDND1-203ENST00000394181 SUPT20HQ8NEM7 779 aa22.09■■□□□ 1.13
CLDND1-203ENST00000394181 ANKS1AQ92625 1134 aa22.09■■□□□ 1.13
CLDND1-203ENST00000394181 SYAP1Q96A49 352 aaPredicted RBP22.09■■□□□ 1.13
CLDND1-203ENST00000394181 KAT14Q9H8E8 782 aa22.09■■□□□ 1.13
CLDND1-203ENST00000394181 MYH1P12882 1939 aa22.09■■□□□ 1.13
CLDND1-203ENST00000394181 CALM1P0DP23 149 aa22.09■■□□□ 1.13
CLDND1-203ENST00000394181 CALM2P0DP24 149 aa22.09■■□□□ 1.13
CLDND1-203ENST00000394181 CALM3P0DP25 149 aa22.09■■□□□ 1.13
CLDND1-203ENST00000394181 FKBP1AP62942 108 aaKnown RBP22.09■■□□□ 1.13
CLDND1-203ENST00000394181 TRIM29Q14134 588 aa22.09■■□□□ 1.13
CLDND1-203ENST00000394181 PPP2R5BQ15173 497 aa22.09■■□□□ 1.13
CLDND1-203ENST00000394181 BRAPQ7Z569 592 aa22.09■■□□□ 1.13
CLDND1-203ENST00000394181 PNMA1Q8ND90 353 aa22.09■■□□□ 1.13
CLDND1-203ENST00000394181 RBSNQ9H1K0 784 aa22.09■■□□□ 1.13
CLDND1-203ENST00000394181 TCP11L1Q9NUJ3 509 aa22.09■■□□□ 1.13
CLDND1-203ENST00000394181 STX8Q9UNK0 236 aa22.09■■□□□ 1.13
CLDND1-203ENST00000394181 MTMR7Q9Y216 660 aa22.09■■□□□ 1.13
CLDND1-203ENST00000394181 ZNF646O15015 1829 aaPredicted RBP22.08■■□□□ 1.13
CLDND1-203ENST00000394181 GOLGA6L4A6NEF3 574 aa22.08■■□□□ 1.13
CLDND1-203ENST00000394181 VEGFAP15692 232 aaPredicted RBP22.08■■□□□ 1.13
CLDND1-203ENST00000394181 R3HDM1Q15032 1099 aaKnown RBP22.08■■□□□ 1.13
CLDND1-203ENST00000394181 RASGRP2Q7LDG7 609 aa22.08■■□□□ 1.13
CLDND1-203ENST00000394181 RTKN2Q8IZC4 609 aa22.08■■□□□ 1.13
CLDND1-203ENST00000394181 GNL3Q9BVP2 549 aaKnown RBP eCLIP22.08■■□□□ 1.13
CLDND1-203ENST00000394181 RNF26Q9BY78 433 aaPredicted RBP22.08■■□□□ 1.13
CLDND1-203ENST00000394181 RTEL1Q9NZ71 1219 aa22.08■■□□□ 1.13
CLDND1-203ENST00000394181 MYH15Q9Y2K3 1946 aa22.08■■□□□ 1.13
CLDND1-203ENST00000394181 COL4A5P29400 1685 aa22.08■■□□□ 1.13
CLDND1-203ENST00000394181 BTBD18B2RXH4 712 aa22.08■■□□□ 1.12
CLDND1-203ENST00000394181 RAD17O75943 681 aa22.08■■□□□ 1.12
CLDND1-203ENST00000394181 GABPAQ06546 454 aa22.08■■□□□ 1.12
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms