RNA–Protein interactions for RNA: ENST00000394156.7

CDH11-202, Transcript of cadherin 11, humanhuman

TSL 1 (best) BASIC

Gene CDH11, Length 6,874 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH11-202ENST00000394156 ZNF654Q8IZM8 581 aa10.28□□□□□ -0.76
CDH11-202ENST00000394156 LMBRD1Q9NUN5 540 aa10.28□□□□□ -0.76
CDH11-202ENST00000394156 ATP5JP18859 108 aa10.27□□□□□ -0.76
CDH11-202ENST00000394156 CCDC25Q86WR0 208 aa10.27□□□□□ -0.76
CDH11-202ENST00000394156 SEPT12Q8IYM1 358 aa10.27□□□□□ -0.76
CDH11-202ENST00000394156 SSH3Q8TE77 659 aa10.27□□□□□ -0.76
CDH11-202ENST00000394156 MXD3Q9BW11 206 aa10.27□□□□□ -0.76
CDH11-202ENST00000394156 ZNF804BA4D1E1 1349 aa10.27□□□□□ -0.76
CDH11-202ENST00000394156 SMCO2A6NFE2 343 aa10.27□□□□□ -0.77
CDH11-202ENST00000394156 GCNT3O95395 438 aa10.27□□□□□ -0.77
CDH11-202ENST00000394156 SASH1O94885 1247 aa10.27□□□□□ -0.77
CDH11-202ENST00000394156 DLGAP5Q15398 846 aa10.27□□□□□ -0.77
CDH11-202ENST00000394156 ERMNQ8TAM6 284 aa10.27□□□□□ -0.77
CDH11-202ENST00000394156 C21orf2O43822 256 aa10.27□□□□□ -0.77
CDH11-202ENST00000394156 DEXIO95424 95 aa10.27□□□□□ -0.77
CDH11-202ENST00000394156 SERPINB2P05120 415 aa10.27□□□□□ -0.77
CDH11-202ENST00000394156 PRR16Q569H4 304 aa10.27□□□□□ -0.77
CDH11-202ENST00000394156 KANK3Q6NY19 840 aa10.27□□□□□ -0.77
CDH11-202ENST00000394156 NLRP10Q86W26 655 aa10.27□□□□□ -0.77
CDH11-202ENST00000394156 ZSCAN10Q96SZ4 725 aaPredicted RBP10.27□□□□□ -0.77
CDH11-202ENST00000394156 IGSF1Q8N6C5 1336 aa10.27□□□□□ -0.77
CDH11-202ENST00000394156 PSMA7O14818 248 aa10.27□□□□□ -0.77
CDH11-202ENST00000394156 ALAS1P13196 640 aa10.27□□□□□ -0.77
CDH11-202ENST00000394156 LMAN1P49257 510 aa10.27□□□□□ -0.77
CDH11-202ENST00000394156 IGBP1P78318 339 aa10.27□□□□□ -0.77
CDH11-202ENST00000394156 OSBP2Q969R2 916 aa10.27□□□□□ -0.77
CDH11-202ENST00000394156 GDAP1L1Q96MZ0 367 aa10.27□□□□□ -0.77
CDH11-202ENST00000394156 LSG1Q9H089 658 aaKnown RBP10.27□□□□□ -0.77
CDH11-202ENST00000394156 RBM28Q9NW13 759 aaKnown RBP10.27□□□□□ -0.77
CDH11-202ENST00000394156 ERBB3P21860 1342 aa10.27□□□□□ -0.77
CDH11-202ENST00000394156 ADCY9O60503 1353 aa10.27□□□□□ -0.77
CDH11-202ENST00000394156 BTBD18B2RXH4 712 aa10.26□□□□□ -0.77
CDH11-202ENST00000394156 ERLIN1O75477 346 aa10.26□□□□□ -0.77
CDH11-202ENST00000394156 CYP4A11Q02928 519 aa10.26□□□□□ -0.77
CDH11-202ENST00000394156 RNF187Q5TA31 235 aaPredicted RBP10.26□□□□□ -0.77
CDH11-202ENST00000394156 METTL13Q8N6R0 699 aa10.26□□□□□ -0.77
CDH11-202ENST00000394156 WDR66Q8TBY9 1149 aa10.26□□□□□ -0.77
CDH11-202ENST00000394156 PUS7Q96PZ0 661 aaKnown RBP10.26□□□□□ -0.77
CDH11-202ENST00000394156 PIH1D3Q9NQM4 214 aaKnown RBP10.26□□□□□ -0.77
CDH11-202ENST00000394156 RDXP35241 583 aaKnown RBP10.26□□□□□ -0.77
CDH11-202ENST00000394156 MTX1Q13505 466 aa10.26□□□□□ -0.77
CDH11-202ENST00000394156 USP17L2Q6R6M4 530 aa10.26□□□□□ -0.77
CDH11-202ENST00000394156 SV2BQ7L1I2 683 aa10.26□□□□□ -0.77
CDH11-202ENST00000394156 VPS36Q86VN1 386 aa10.26□□□□□ -0.77
CDH11-202ENST00000394156 TBC1D5Q92609 795 aa10.26□□□□□ -0.77
CDH11-202ENST00000394156 COA7Q96BR5 231 aa10.26□□□□□ -0.77
CDH11-202ENST00000394156 USP28Q96RU2 1077 aa10.26□□□□□ -0.77
CDH11-202ENST00000394156 NOC4LQ9BVI4 516 aaKnown RBP10.26□□□□□ -0.77
CDH11-202ENST00000394156 HGSO14964 777 aaPredicted RBP10.26□□□□□ -0.77
CDH11-202ENST00000394156 NDUFA8P51970 172 aa10.26□□□□□ -0.77
CDH11-202ENST00000394156 LLGL1Q15334 1064 aa10.26□□□□□ -0.77
CDH11-202ENST00000394156 Q3C1V9 767 aa10.26□□□□□ -0.77
CDH11-202ENST00000394156 SNX29Q8TEQ0 813 aa10.26□□□□□ -0.77
CDH11-202ENST00000394156 ATG3Q9NT62 314 aa10.26□□□□□ -0.77
CDH11-202ENST00000394156 TMOD4Q9NZQ9 345 aa10.26□□□□□ -0.77
CDH11-202ENST00000394156 MEIS1O00470 390 aa10.26□□□□□ -0.77
CDH11-202ENST00000394156 TTC6Q86TZ1 520 aa10.26□□□□□ -0.77
CDH11-202ENST00000394156 MYCT1Q8N699 235 aa10.26□□□□□ -0.77
CDH11-202ENST00000394156 MYO3AQ8NEV4 1616 aa10.26□□□□□ -0.77
CDH11-202ENST00000394156 TNKSO95271 1327 aa10.26□□□□□ -0.77
CDH11-202ENST00000394156 IRX5P78411 483 aaPredicted RBP10.26□□□□□ -0.77
CDH11-202ENST00000394156 SMC1AQ14683 1233 aaKnown RBP10.26□□□□□ -0.77
CDH11-202ENST00000394156 RMND1Q9NWS8 449 aa10.26□□□□□ -0.77
CDH11-202ENST00000394156 PSDA5PKW4 1024 aaPredicted RBP10.26□□□□□ -0.77
CDH11-202ENST00000394156 MADDQ8WXG6 1647 aa10.26□□□□□ -0.77
CDH11-202ENST00000394156 ATP7BP35670 1465 aa10.25□□□□□ -0.77
CDH11-202ENST00000394156 PLCG2P16885 1265 aa10.25□□□□□ -0.77
CDH11-202ENST00000394156 CTR9Q6PD62 1173 aa10.25□□□□□ -0.77
CDH11-202ENST00000394156 GNA11P29992 359 aa10.25□□□□□ -0.77
CDH11-202ENST00000394156 PAFAH1B1P43034 410 aa10.25□□□□□ -0.77
CDH11-202ENST00000394156 GSTA5Q7RTV2 222 aa10.25□□□□□ -0.77
CDH11-202ENST00000394156 KRT27Q7Z3Y8 459 aa10.25□□□□□ -0.77
CDH11-202ENST00000394156 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP10.25□□□□□ -0.77
CDH11-202ENST00000394156 CARD10Q9BWT7 1032 aa10.25□□□□□ -0.77
CDH11-202ENST00000394156 ARHGEF10LQ9HCE6 1279 aa10.25□□□□□ -0.77
CDH11-202ENST00000394156 GNAQP50148 359 aa10.25□□□□□ -0.77
CDH11-202ENST00000394156 UBE2SQ16763 222 aa10.25□□□□□ -0.77
CDH11-202ENST00000394156 ARHGAP44Q17R89 818 aa10.25□□□□□ -0.77
CDH11-202ENST00000394156 PHLDB2Q86SQ0 1253 aa10.25□□□□□ -0.77
CDH11-202ENST00000394156 PKNOX2Q96KN3 472 aa10.25□□□□□ -0.77
CDH11-202ENST00000394156 ELP1O95163 1332 aa10.25□□□□□ -0.77
CDH11-202ENST00000394156 PDE8BO95263 885 aa10.25□□□□□ -0.77
CDH11-202ENST00000394156 BIRC3Q13489 604 aa10.25□□□□□ -0.77
CDH11-202ENST00000394156 FAM114A1Q8IWE2 563 aa10.25□□□□□ -0.77
CDH11-202ENST00000394156 TAB3Q8N5C8 712 aaPredicted RBP10.25□□□□□ -0.77
CDH11-202ENST00000394156 NEK11Q8NG66 645 aa10.25□□□□□ -0.77
CDH11-202ENST00000394156 GTF3C6Q969F1 213 aa10.25□□□□□ -0.77
CDH11-202ENST00000394156 ALS2CR12Q96Q35 445 aa10.25□□□□□ -0.77
CDH11-202ENST00000394156 MRPL44Q9H9J2 332 aaKnown RBP10.25□□□□□ -0.77
CDH11-202ENST00000394156 CYP21A2P08686 494 aa10.25□□□□□ -0.77
CDH11-202ENST00000394156 POLA2Q14181 598 aa10.25□□□□□ -0.77
CDH11-202ENST00000394156 ADAT2Q7Z6V5 191 aaKnown RBP10.25□□□□□ -0.77
CDH11-202ENST00000394156 SOS2Q07890 1332 aaPredicted RBP10.25□□□□□ -0.77
CDH11-202ENST00000394156 EN1Q05925 392 aaPredicted RBP10.24□□□□□ -0.77
CDH11-202ENST00000394156 NR5A1Q13285 461 aa10.24□□□□□ -0.77
CDH11-202ENST00000394156 CERKLQ49MI3 558 aaPredicted RBP10.24□□□□□ -0.77
CDH11-202ENST00000394156 UTP14CQ5TAP6 766 aaKnown RBP10.24□□□□□ -0.77
CDH11-202ENST00000394156 TEKT1Q969V4 418 aa10.24□□□□□ -0.77
CDH11-202ENST00000394156 A2ML1A8K2U0 1454 aa10.24□□□□□ -0.77
CDH11-202ENST00000394156 GOLGA6L10A0A0M3HER8 536 aa10.24□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms