RNA–Protein interactions for RNA: ENST00000394053.6

MTHFD2-201, Transcript of methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 2, methenyltetrahydrofolate cyclohydrolase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MTHFD2, Length 4,456 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MTHFD2-201ENST00000394053 MTERF4Q7Z6M4 381 aaKnown RBP12.05□□□□□ -0.48
MTHFD2-201ENST00000394053 REXO1Q8N1G1 1221 aaKnown RBP12.05□□□□□ -0.48
MTHFD2-201ENST00000394053 CCDC150Q8NCX0 1101 aa12.05□□□□□ -0.48
MTHFD2-201ENST00000394053 PPIL4Q8WUA2 492 aaKnown RBP eCLIP12.05□□□□□ -0.48
MTHFD2-201ENST00000394053 MMRN2Q9H8L6 949 aa12.05□□□□□ -0.48
MTHFD2-201ENST00000394053 ADCY7P51828 1080 aa12.05□□□□□ -0.48
MTHFD2-201ENST00000394053 RBM6P78332 1123 aaKnown RBP12.05□□□□□ -0.48
MTHFD2-201ENST00000394053 TAF4BQ92750 862 aa12.05□□□□□ -0.48
MTHFD2-201ENST00000394053 SMCO2A6NFE2 343 aa12.04□□□□□ -0.48
MTHFD2-201ENST00000394053 ECM2O94769 699 aaPredicted RBP12.04□□□□□ -0.48
MTHFD2-201ENST00000394053 LARGE1O95461 756 aa12.04□□□□□ -0.48
MTHFD2-201ENST00000394053 PCP11498 1178 aaKnown RBP12.04□□□□□ -0.48
MTHFD2-201ENST00000394053 DNA2P51530 1060 aa12.04□□□□□ -0.48
MTHFD2-201ENST00000394053 MYL5Q02045 173 aa12.04□□□□□ -0.48
MTHFD2-201ENST00000394053 GRM1Q13255 1194 aa12.04□□□□□ -0.48
MTHFD2-201ENST00000394053 TXNRD1Q16881 649 aa12.04□□□□□ -0.48
MTHFD2-201ENST00000394053 KRT25Q7Z3Z0 450 aa12.04□□□□□ -0.48
MTHFD2-201ENST00000394053 MPHOSPH6Q99547 160 aaKnown RBP12.04□□□□□ -0.48
MTHFD2-201ENST00000394053 MAPK8IP1Q9UQF2 711 aa12.04□□□□□ -0.48
MTHFD2-201ENST00000394053 USP32Q8NFA0 1604 aa12.04□□□□□ -0.48
MTHFD2-201ENST00000394053 MAP2P11137 1827 aaKnown RBP12.04□□□□□ -0.48
MTHFD2-201ENST00000394053 PRDX5P30044 214 aa12.04□□□□□ -0.48
MTHFD2-201ENST00000394053 CERKLQ49MI3 558 aaPredicted RBP12.04□□□□□ -0.48
MTHFD2-201ENST00000394053 STAMQ92783 540 aa12.04□□□□□ -0.48
MTHFD2-201ENST00000394053 GPHNQ9NQX3 736 aaPredicted RBP12.04□□□□□ -0.48
MTHFD2-201ENST00000394053 H7C1D1 291 aa12.04□□□□□ -0.48
MTHFD2-201ENST00000394053 AKR1B10O60218 316 aa12.04□□□□□ -0.48
MTHFD2-201ENST00000394053 USO1O60763 962 aaKnown RBP12.04□□□□□ -0.48
MTHFD2-201ENST00000394053 ADRA2BP18089 450 aa12.04□□□□□ -0.48
MTHFD2-201ENST00000394053 ZNF445P59923 1031 aa12.04□□□□□ -0.48
MTHFD2-201ENST00000394053 ATG9AQ7Z3C6 839 aa12.04□□□□□ -0.48
MTHFD2-201ENST00000394053 NSUN7Q8NE18 718 aaKnown RBP12.04□□□□□ -0.48
MTHFD2-201ENST00000394053 XPO5Q9HAV4 1204 aaKnown RBP eCLIP12.04□□□□□ -0.48
MTHFD2-201ENST00000394053 CFBP00751 764 aa12.03□□□□□ -0.48
MTHFD2-201ENST00000394053 USP17L8P0C7I0 530 aa12.03□□□□□ -0.48
MTHFD2-201ENST00000394053 NFIXQ14938 502 aa12.03□□□□□ -0.48
MTHFD2-201ENST00000394053 SPAG5Q96R06 1193 aa12.03□□□□□ -0.48
MTHFD2-201ENST00000394053 MAP7D2Q96T17 732 aa12.03□□□□□ -0.48
MTHFD2-201ENST00000394053 FRMPD2Q68DX3 1309 aaPredicted RBP12.03□□□□□ -0.48
MTHFD2-201ENST00000394053 SSR1P43307 286 aaKnown RBP12.03□□□□□ -0.48
MTHFD2-201ENST00000394053 SCARF1Q14162 830 aa12.03□□□□□ -0.48
MTHFD2-201ENST00000394053 NKX1-1Q15270 411 aaPredicted RBP12.03□□□□□ -0.48
MTHFD2-201ENST00000394053 SKIDA1Q1XH10 827 aa12.03□□□□□ -0.48
MTHFD2-201ENST00000394053 ADALQ6DHV7 355 aa12.03□□□□□ -0.48
MTHFD2-201ENST00000394053 SV2BQ7L1I2 683 aa12.03□□□□□ -0.48
MTHFD2-201ENST00000394053 GLT8D2Q9H1C3 349 aa12.03□□□□□ -0.48
MTHFD2-201ENST00000394053 NPR1P16066 1061 aa12.03□□□□□ -0.48
MTHFD2-201ENST00000394053 ZNF771Q7L3S4 317 aaPredicted RBP12.03□□□□□ -0.48
MTHFD2-201ENST00000394053 BICD1Q96G01 975 aa12.03□□□□□ -0.48
MTHFD2-201ENST00000394053 RIPOR2Q9Y4F9 1068 aa12.03□□□□□ -0.48
MTHFD2-201ENST00000394053 KDM4FA0A1W2PPD8 638 aa12.03□□□□□ -0.48
MTHFD2-201ENST00000394053 SCG2P13521 617 aa12.03□□□□□ -0.48
MTHFD2-201ENST00000394053 GPKOWQ92917 476 aaPredicted RBP eCLIP12.03□□□□□ -0.481e-6■□□□□ 8.1
MTHFD2-201ENST00000394053 LRWD1Q9UFC0 647 aa12.03□□□□□ -0.48
MTHFD2-201ENST00000394053 MYO6Q9UM54 1294 aa12.03□□□□□ -0.48
MTHFD2-201ENST00000394053 ARHGEF28Q8N1W1 1705 aaKnown RBP12.02□□□□□ -0.48
MTHFD2-201ENST00000394053 CCT6AP40227 531 aaKnown RBP12.02□□□□□ -0.48
MTHFD2-201ENST00000394053 SNW1Q13573 536 aaKnown RBP12.02□□□□□ -0.48
MTHFD2-201ENST00000394053 NAP1L4Q99733 375 aaKnown RBP12.02□□□□□ -0.48
MTHFD2-201ENST00000394053 BIN2Q9UBW5 565 aaPredicted RBP12.02□□□□□ -0.48
MTHFD2-201ENST00000394053 ZKSCAN5Q9Y2L8 839 aa12.02□□□□□ -0.48
MTHFD2-201ENST00000394053 MST1RQ04912 1400 aa12.02□□□□□ -0.48
MTHFD2-201ENST00000394053 CLRN2A0PK11 232 aa12.02□□□□□ -0.49
MTHFD2-201ENST00000394053 FERMT2Q96AC1 680 aa12.02□□□□□ -0.49
MTHFD2-201ENST00000394053 ZNF408Q9H9D4 720 aa12.02□□□□□ -0.49
MTHFD2-201ENST00000394053 ATF5Q9Y2D1 282 aaPredicted RBP12.02□□□□□ -0.49
MTHFD2-201ENST00000394053 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP12.02□□□□□ -0.49
MTHFD2-201ENST00000394053 CPDO75976 1380 aa12.02□□□□□ -0.49
MTHFD2-201ENST00000394053 CHMP2AO43633 222 aa12.02□□□□□ -0.49
MTHFD2-201ENST00000394053 NR1I2O75469 434 aa12.02□□□□□ -0.49
MTHFD2-201ENST00000394053 RAD17O75943 681 aa12.02□□□□□ -0.49
MTHFD2-201ENST00000394053 POTEJP0CG39 1038 aa12.02□□□□□ -0.49
MTHFD2-201ENST00000394053 PTGS1P23219 599 aa12.02□□□□□ -0.49
MTHFD2-201ENST00000394053 CASQ1P31415 396 aa12.02□□□□□ -0.49
MTHFD2-201ENST00000394053 TNNT3P45378 269 aaPredicted RBP12.02□□□□□ -0.49
MTHFD2-201ENST00000394053 GNG11P61952 73 aa12.02□□□□□ -0.49
MTHFD2-201ENST00000394053 ITPK1Q13572 414 aa12.02□□□□□ -0.49
MTHFD2-201ENST00000394053 TNFAIP1Q13829 316 aa12.02□□□□□ -0.49
MTHFD2-201ENST00000394053 NSMFQ6X4W1 530 aa12.02□□□□□ -0.49
MTHFD2-201ENST00000394053 BLIDQ8IZY5 108 aa12.02□□□□□ -0.49
MTHFD2-201ENST00000394053 SERPINB13Q9UIV8 391 aa12.02□□□□□ -0.49
MTHFD2-201ENST00000394053 FAM13AO94988 1023 aa12.01□□□□□ -0.49
MTHFD2-201ENST00000394053 RDXP35241 583 aaKnown RBP12.01□□□□□ -0.49
MTHFD2-201ENST00000394053 HOMER2Q9NSB8 354 aa12.01□□□□□ -0.49
MTHFD2-201ENST00000394053 SPATA31A5Q5VU36 1347 aa12.01□□□□□ -0.49
MTHFD2-201ENST00000394053 SPATA31A6Q5VVP1 1343 aa12.01□□□□□ -0.49
MTHFD2-201ENST00000394053 SPATA31A7Q8IWB4 1347 aa12.01□□□□□ -0.49
MTHFD2-201ENST00000394053 BACH1O14867 736 aa12.01□□□□□ -0.49
MTHFD2-201ENST00000394053 ICA1Q05084 483 aa12.01□□□□□ -0.49
MTHFD2-201ENST00000394053 NOLC1Q14978 699 aaKnown RBP eCLIP12.01□□□□□ -0.497e-6■■■□□ 16.5
MTHFD2-201ENST00000394053 CCDC174Q6PII3 467 aa12.01□□□□□ -0.49
MTHFD2-201ENST00000394053 KIFC2Q96AC6 838 aa12.01□□□□□ -0.49
MTHFD2-201ENST00000394053 DYNLL2Q96FJ2 89 aa12.01□□□□□ -0.49
MTHFD2-201ENST00000394053 TMOD4Q9NZQ9 345 aa12.01□□□□□ -0.49
MTHFD2-201ENST00000394053 FER1L4A9Z1Z3 1794 aa12.01□□□□□ -0.49
MTHFD2-201ENST00000394053 PDE4DQ08499 809 aa12.01□□□□□ -0.49
MTHFD2-201ENST00000394053 HS2ST1Q7LGA3 356 aa12.01□□□□□ -0.49
MTHFD2-201ENST00000394053 ZNF34Q8IZ26 560 aa12.01□□□□□ -0.49
MTHFD2-201ENST00000394053 BICDL2A1A5D9 508 aa12.01□□□□□ -0.49
MTHFD2-201ENST00000394053 ERLIN1O75477 346 aa12.01□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms