RNA–Protein interactions for RNA: ENST00000393560.5

LAMB1-203, Transcript of laminin subunit beta 1, humanhuman

TSL 1 (best) BASIC

Gene LAMB1, Length 2,806 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LAMB1-203ENST00000393560 GOLGA1Q92805 767 aa12.82□□□□□ -0.36
LAMB1-203ENST00000393560 DTNBP1Q96EV8 351 aa12.82□□□□□ -0.36
LAMB1-203ENST00000393560 ANO10Q9NW15 660 aa12.82□□□□□ -0.36
LAMB1-203ENST00000393560 ZNHIT6Q9NWK9 470 aaKnown RBP12.82□□□□□ -0.36
LAMB1-203ENST00000393560 RHBDL2Q9NX52 303 aa12.82□□□□□ -0.36
LAMB1-203ENST00000393560 KDRP35968 1356 aa12.81□□□□□ -0.36
LAMB1-203ENST00000393560 DLC1Q96QB1 1528 aa12.81□□□□□ -0.36
LAMB1-203ENST00000393560 FAM83GA6ND36 823 aa12.81□□□□□ -0.36
LAMB1-203ENST00000393560 BECN2A8MW95 431 aa12.81□□□□□ -0.36
LAMB1-203ENST00000393560 FANCGO15287 622 aa12.81□□□□□ -0.36
LAMB1-203ENST00000393560 SHOX2O60902 331 aaPredicted RBP12.81□□□□□ -0.36
LAMB1-203ENST00000393560 KCNA2P16389 499 aa12.81□□□□□ -0.36
LAMB1-203ENST00000393560 CBX3Q13185 183 aa12.81□□□□□ -0.36
LAMB1-203ENST00000393560 WDR78Q5VTH9 848 aa12.81□□□□□ -0.36
LAMB1-203ENST00000393560 SEPT14Q6ZU15 432 aa12.81□□□□□ -0.36
LAMB1-203ENST00000393560 B4GALNT4Q76KP1 1039 aa12.81□□□□□ -0.36
LAMB1-203ENST00000393560 CKAP2LQ8IYA6 745 aa12.81□□□□□ -0.36
LAMB1-203ENST00000393560 CACTIN-AS1Q8N1I8 211 aa12.81□□□□□ -0.36
LAMB1-203ENST00000393560 OTUD7AQ8TE49 926 aaPredicted RBP12.81□□□□□ -0.36
LAMB1-203ENST00000393560 SNRNP27Q8WVK2 155 aaKnown RBP12.81□□□□□ -0.36
LAMB1-203ENST00000393560 NUP58Q9BVL2 599 aa12.81□□□□□ -0.36
LAMB1-203ENST00000393560 OCEL1Q9H607 264 aa12.81□□□□□ -0.36
LAMB1-203ENST00000393560 PHF24Q9UPV7 400 aa12.81□□□□□ -0.36
LAMB1-203ENST00000393560 TCHHQ07283 1943 aa12.81□□□□□ -0.36
LAMB1-203ENST00000393560 FER1L4A9Z1Z3 1794 aa12.81□□□□□ -0.36
LAMB1-203ENST00000393560 UNCXA6NJT0 531 aa12.81□□□□□ -0.36
LAMB1-203ENST00000393560 HMMRO75330 724 aa12.81□□□□□ -0.36
LAMB1-203ENST00000393560 STK10O94804 968 aaKnown RBP12.81□□□□□ -0.36
LAMB1-203ENST00000393560 CNGA1P29973 690 aa12.81□□□□□ -0.36
LAMB1-203ENST00000393560 TMEM87AQ8NBN3 555 aa12.81□□□□□ -0.36
LAMB1-203ENST00000393560 OSBPL10Q9BXB5 764 aa12.81□□□□□ -0.36
LAMB1-203ENST00000393560 GBP3Q9H0R5 595 aa12.81□□□□□ -0.36
LAMB1-203ENST00000393560 PLEKHG1Q9ULL1 1385 aa12.81□□□□□ -0.36
LAMB1-203ENST00000393560 LDHAP00338 332 aaKnown RBP12.8□□□□□ -0.36
LAMB1-203ENST00000393560 TRIM21P19474 475 aaKnown RBP12.8□□□□□ -0.36
LAMB1-203ENST00000393560 USP5P45974 858 aa12.8□□□□□ -0.36
LAMB1-203ENST00000393560 SLC4A8Q2Y0W8 1093 aa12.8□□□□□ -0.36
LAMB1-203ENST00000393560 PALB2Q86YC2 1186 aa12.8□□□□□ -0.36
LAMB1-203ENST00000393560 HNRNPLLQ8WVV9 542 aaKnown RBP12.8□□□□□ -0.36
LAMB1-203ENST00000393560 SUGT1Q9Y2Z0 365 aa12.8□□□□□ -0.36
LAMB1-203ENST00000393560 BOLA2-SMG1P6H3BVE0 249 aa12.8□□□□□ -0.36
LAMB1-203ENST00000393560 RCN1Q15293 331 aa12.8□□□□□ -0.36
LAMB1-203ENST00000393560 MAP3K11Q16584 847 aa12.8□□□□□ -0.36
LAMB1-203ENST00000393560 MAP7D1Q3KQU3 841 aa12.8□□□□□ -0.36
LAMB1-203ENST00000393560 KANK3Q6NY19 840 aa12.8□□□□□ -0.36
LAMB1-203ENST00000393560 CCDC121Q6ZUS5 278 aa12.8□□□□□ -0.36
LAMB1-203ENST00000393560 FUKQ8N0W3 1084 aa12.8□□□□□ -0.36
LAMB1-203ENST00000393560 NACC2Q96BF6 587 aa12.8□□□□□ -0.36
LAMB1-203ENST00000393560 SRCIN1Q9C0H9 1055 aa12.8□□□□□ -0.36
LAMB1-203ENST00000393560 ZWILCHQ9H900 591 aa12.8□□□□□ -0.36
LAMB1-203ENST00000393560 EMILIN1Q9Y6C2 1016 aa12.8□□□□□ -0.36
LAMB1-203ENST00000393560 CDHR2Q9BYE9 1310 aa12.8□□□□□ -0.36
LAMB1-203ENST00000393560 USP32Q8NFA0 1604 aa12.8□□□□□ -0.36
LAMB1-203ENST00000393560 PTPRUQ92729 1446 aa12.8□□□□□ -0.36
LAMB1-203ENST00000393560 IQSEC2Q5JU85 1478 aa12.8□□□□□ -0.36
LAMB1-203ENST00000393560 PDLIM1O00151 329 aa12.8□□□□□ -0.36
LAMB1-203ENST00000393560 PPFIA3O75145 1194 aa12.8□□□□□ -0.36
LAMB1-203ENST00000393560 ZNF202O95125 648 aa12.8□□□□□ -0.36
LAMB1-203ENST00000393560 TUBB4AP04350 444 aa12.8□□□□□ -0.36
LAMB1-203ENST00000393560 TSHZ3Q63HK5 1081 aa12.8□□□□□ -0.36
LAMB1-203ENST00000393560 HDAC7Q8WUI4 952 aa12.8□□□□□ -0.36
LAMB1-203ENST00000393560 TEKT4Q8WW24 435 aa12.8□□□□□ -0.36
LAMB1-203ENST00000393560 DYDC1Q8WWB3 177 aa12.8□□□□□ -0.36
LAMB1-203ENST00000393560 HPS3Q969F9 1004 aa12.8□□□□□ -0.36
LAMB1-203ENST00000393560 PHACTR3Q96KR7 559 aa12.8□□□□□ -0.36
LAMB1-203ENST00000393560 LNPEPQ9UIQ6 1025 aa12.8□□□□□ -0.36
LAMB1-203ENST00000393560 PAIP2BQ9ULR5 123 aaKnown RBP12.8□□□□□ -0.36
LAMB1-203ENST00000393560 PSDA5PKW4 1024 aaPredicted RBP12.79□□□□□ -0.36
LAMB1-203ENST00000393560 NDUFAB1O14561 156 aa12.79□□□□□ -0.36
LAMB1-203ENST00000393560 ZNF165P49910 485 aa12.79□□□□□ -0.36
LAMB1-203ENST00000393560 GNAQP50148 359 aa12.79□□□□□ -0.36
LAMB1-203ENST00000393560 RRS1Q15050 365 aaKnown RBP12.79□□□□□ -0.36
LAMB1-203ENST00000393560 KLHL10Q6JEL2 608 aa12.79□□□□□ -0.36
LAMB1-203ENST00000393560 SLC15A3Q8IY34 581 aa12.79□□□□□ -0.36
LAMB1-203ENST00000393560 FNBP4Q8N3X1 1017 aaPredicted RBP12.79□□□□□ -0.36
LAMB1-203ENST00000393560 FAM167BQ9BTA0 163 aa12.79□□□□□ -0.36
LAMB1-203ENST00000393560 BIN1O00499 593 aa12.79□□□□□ -0.36
LAMB1-203ENST00000393560 PRPF6O94906 941 aaKnown RBP12.79□□□□□ -0.36
LAMB1-203ENST00000393560 NUCB1Q02818 461 aa12.79□□□□□ -0.36
LAMB1-203ENST00000393560 BICDL1Q6ZP65 573 aa12.79□□□□□ -0.36
LAMB1-203ENST00000393560 BHMTQ93088 406 aa12.79□□□□□ -0.36
LAMB1-203ENST00000393560 AGBL1Q96MI9 1066 aa12.79□□□□□ -0.36
LAMB1-203ENST00000393560 PLEKHF1Q96S99 279 aa12.79□□□□□ -0.36
LAMB1-203ENST00000393560 CAPS2Q9BXY5 557 aa12.79□□□□□ -0.36
LAMB1-203ENST00000393560 GPBP1L1Q9HC44 474 aaPredicted RBP12.79□□□□□ -0.36
LAMB1-203ENST00000393560 C2CD2Q9Y426 696 aa12.79□□□□□ -0.36
LAMB1-203ENST00000393560 A6NHS1 94 aa12.78□□□□□ -0.36
LAMB1-203ENST00000393560 LRRIQ3A6PVS8 624 aaPredicted RBP12.78□□□□□ -0.36
LAMB1-203ENST00000393560 DIAPH1O60610 1272 aaKnown RBP12.78□□□□□ -0.36
LAMB1-203ENST00000393560 CDC45O75419 566 aa12.78□□□□□ -0.36
LAMB1-203ENST00000393560 SYF2O95926 243 aaKnown RBP12.78□□□□□ -0.36
LAMB1-203ENST00000393560 DPY19L2Q6NUT2 758 aa12.78□□□□□ -0.36
LAMB1-203ENST00000393560 BRAPQ7Z569 592 aa12.78□□□□□ -0.36
LAMB1-203ENST00000393560 RIN2Q8WYP3 895 aaPredicted RBP12.78□□□□□ -0.36
LAMB1-203ENST00000393560 RSPH1Q8WYR4 309 aa12.78□□□□□ -0.36
LAMB1-203ENST00000393560 L3MBTL1Q9Y468 752 aa12.78□□□□□ -0.36
LAMB1-203ENST00000393560 ATXN2Q99700 1313 aaKnown RBP12.78□□□□□ -0.36
LAMB1-203ENST00000393560 GOLGA6L9A6NEM1 432 aa12.78□□□□□ -0.36
LAMB1-203ENST00000393560 OPLAHO14841 1288 aa12.78□□□□□ -0.36
LAMB1-203ENST00000393560 GNGT1P63211 74 aa12.78□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 63.7 ms