RNA–Protein interactions for RNA: ENST00000393287.9

ATXN3-203, Transcript of ataxin 3, humanhuman

TSL 1 (best) BASIC

Gene ATXN3, Length 6,770 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-203ENST00000393287 GUCY1B3Q02153 619 aa9.19□□□□□ -0.94
ATXN3-203ENST00000393287 IFI16Q16666 785 aaKnown RBP9.19□□□□□ -0.94
ATXN3-203ENST00000393287 TBC1D5Q92609 795 aa9.19□□□□□ -0.94
ATXN3-203ENST00000393287 TAF4BQ92750 862 aa9.19□□□□□ -0.94
ATXN3-203ENST00000393287 COL3A1P02461 1466 aaPredicted RBP9.19□□□□□ -0.94
ATXN3-203ENST00000393287 SMTNP53814 917 aa9.19□□□□□ -0.94
ATXN3-203ENST00000393287 FERMT3Q86UX7 667 aa9.19□□□□□ -0.94
ATXN3-203ENST00000393287 SLC17A8Q8NDX2 589 aa9.19□□□□□ -0.94
ATXN3-203ENST00000393287 SMCR8Q8TEV9 937 aaPredicted RBP9.19□□□□□ -0.94
ATXN3-203ENST00000393287 CAMKK2Q96RR4 588 aa9.19□□□□□ -0.94
ATXN3-203ENST00000393287 MTA3Q9BTC8 594 aa9.19□□□□□ -0.94
ATXN3-203ENST00000393287 VPS33BQ9H267 617 aa9.19□□□□□ -0.94
ATXN3-203ENST00000393287 AZI2Q9H6S1 392 aa9.19□□□□□ -0.94
ATXN3-203ENST00000393287 BIN2Q9UBW5 565 aaPredicted RBP9.19□□□□□ -0.94
ATXN3-203ENST00000393287 SNX14Q9Y5W7 946 aa9.19□□□□□ -0.94
ATXN3-203ENST00000393287 NEBLO76041 1014 aa9.18□□□□□ -0.94
ATXN3-203ENST00000393287 TFAP4Q01664 338 aa9.18□□□□□ -0.94
ATXN3-203ENST00000393287 CCDC65Q8IXS2 484 aa9.18□□□□□ -0.94
ATXN3-203ENST00000393287 MSANTD4Q8NCY6 345 aa9.18□□□□□ -0.94
ATXN3-203ENST00000393287 GPCPD1Q9NPB8 672 aa9.18□□□□□ -0.94
ATXN3-203ENST00000393287 PSMA7O14818 248 aa9.18□□□□□ -0.94
ATXN3-203ENST00000393287 SPTLC2O15270 562 aa9.18□□□□□ -0.94
ATXN3-203ENST00000393287 RPL13P26373 211 aaKnown RBP9.18□□□□□ -0.94
ATXN3-203ENST00000393287 ICA1Q05084 483 aa9.18□□□□□ -0.94
ATXN3-203ENST00000393287 RABL6Q3YEC7 729 aaPredicted RBP9.18□□□□□ -0.94
ATXN3-203ENST00000393287 SLFN12Q8IYM2 578 aa9.18□□□□□ -0.94
ATXN3-203ENST00000393287 CCAR2Q8N163 923 aaKnown RBP9.18□□□□□ -0.94
ATXN3-203ENST00000393287 KANSL2Q9H9L4 492 aa9.18□□□□□ -0.94
ATXN3-203ENST00000393287 M0QZ92 97 aa9.18□□□□□ -0.94
ATXN3-203ENST00000393287 ADD2P35612 726 aa9.18□□□□□ -0.94
ATXN3-203ENST00000393287 IMPG2Q9BZV3 1241 aa9.18□□□□□ -0.94
ATXN3-203ENST00000393287 PI4KBQ9UBF8 816 aa9.18□□□□□ -0.94
ATXN3-203ENST00000393287 IFT172Q9UG01 1749 aa9.18□□□□□ -0.94
ATXN3-203ENST00000393287 ZMYM6O95789 1325 aa9.18□□□□□ -0.94
ATXN3-203ENST00000393287 RPS12P25398 132 aaKnown RBP9.18□□□□□ -0.94
ATXN3-203ENST00000393287 DNM2P50570 870 aa9.18□□□□□ -0.94
ATXN3-203ENST00000393287 EPHA10Q5JZY3 1008 aa9.18□□□□□ -0.94
ATXN3-203ENST00000393287 HACE1Q8IYU2 909 aa9.18□□□□□ -0.94
ATXN3-203ENST00000393287 C2orf69Q8N8R5 385 aa9.18□□□□□ -0.94
ATXN3-203ENST00000393287 IQUBQ8NA54 791 aa9.18□□□□□ -0.94
ATXN3-203ENST00000393287 GTF3C2Q8WUA4 911 aaPredicted RBP9.18□□□□□ -0.94
ATXN3-203ENST00000393287 CD209Q9NNX6 404 aa9.18□□□□□ -0.94
ATXN3-203ENST00000393287 GOLGA6L9A6NEM1 432 aa9.17□□□□□ -0.94
ATXN3-203ENST00000393287 E7EWF7 191 aa9.17□□□□□ -0.94
ATXN3-203ENST00000393287 CSF1RP07333 972 aa9.17□□□□□ -0.94
ATXN3-203ENST00000393287 MTIF2P46199 727 aaKnown RBP9.17□□□□□ -0.94
ATXN3-203ENST00000393287 IFT74Q96LB3 600 aa9.17□□□□□ -0.94
ATXN3-203ENST00000393287 FERMT1Q9BQL6 677 aa9.17□□□□□ -0.94
ATXN3-203ENST00000393287 GCOM1H8Y6P7 765 aaPredicted RBP9.17□□□□□ -0.94
ATXN3-203ENST00000393287 POLR2MP0CAP2 368 aa9.17□□□□□ -0.94
ATXN3-203ENST00000393287 ZNF827Q17R98 1081 aa9.17□□□□□ -0.94
ATXN3-203ENST00000393287 SV2BQ7L1I2 683 aa9.17□□□□□ -0.94
ATXN3-203ENST00000393287 GINM1Q9NU53 330 aa9.17□□□□□ -0.94
ATXN3-203ENST00000393287 PHLPP1O60346 1717 aa9.17□□□□□ -0.94
ATXN3-203ENST00000393287 TCP10L2B9ZVM9 353 aa9.17□□□□□ -0.94
ATXN3-203ENST00000393287 USO1O60763 962 aaKnown RBP9.17□□□□□ -0.94
ATXN3-203ENST00000393287 SASH1O94885 1247 aa9.17□□□□□ -0.94
ATXN3-203ENST00000393287 TTLL1O95922 423 aa9.17□□□□□ -0.94
ATXN3-203ENST00000393287 FDX1P10109 184 aa9.17□□□□□ -0.94
ATXN3-203ENST00000393287 SCNN1DP51172 638 aa9.17□□□□□ -0.94
ATXN3-203ENST00000393287 ZNF341Q9BYN7 854 aa9.17□□□□□ -0.94
ATXN3-203ENST00000393287 NFAT5O94916 1531 aa9.17□□□□□ -0.94
ATXN3-203ENST00000393287 ECE2O60344 883 aa9.17□□□□□ -0.94
ATXN3-203ENST00000393287 STX10O60499 249 aa9.17□□□□□ -0.94
ATXN3-203ENST00000393287 CCDC181Q5TID7 509 aa9.17□□□□□ -0.94
ATXN3-203ENST00000393287 OTUD6AQ7L8S5 288 aa9.17□□□□□ -0.94
ATXN3-203ENST00000393287 NT5C3AQ9H0P0 336 aa9.17□□□□□ -0.94
ATXN3-203ENST00000393287 ZNF277Q9NRM2 450 aaPredicted RBP9.17□□□□□ -0.94
ATXN3-203ENST00000393287 SEPT11Q9NVA2 429 aaKnown RBP9.17□□□□□ -0.94
ATXN3-203ENST00000393287 DBNLQ9UJU6 430 aaKnown RBP9.17□□□□□ -0.94
ATXN3-203ENST00000393287 NOP56O00567 594 aaKnown RBP9.17□□□□□ -0.94
ATXN3-203ENST00000393287 C8orf34Q49A92 452 aa9.17□□□□□ -0.94
ATXN3-203ENST00000393287 HS2ST1Q7LGA3 356 aa9.17□□□□□ -0.94
ATXN3-203ENST00000393287 LRRC45Q96CN5 670 aa9.17□□□□□ -0.94
ATXN3-203ENST00000393287 ELP1O95163 1332 aa9.17□□□□□ -0.94
ATXN3-203ENST00000393287 CFAP100Q494V2 611 aa9.16□□□□□ -0.94
ATXN3-203ENST00000393287 WDR19Q8NEZ3 1342 aa9.16□□□□□ -0.94
ATXN3-203ENST00000393287 CTDSPL2Q05D32 466 aa9.16□□□□□ -0.94
ATXN3-203ENST00000393287 ZNF592Q92610 1267 aa9.16□□□□□ -0.94
ATXN3-203ENST00000393287 MYO5BQ9ULV0 1848 aa9.16□□□□□ -0.94
ATXN3-203ENST00000393287 CHD2O14647 1828 aaKnown RBP9.16□□□□□ -0.94
ATXN3-203ENST00000393287 SPDYE4A6NLX3 237 aa9.16□□□□□ -0.94
ATXN3-203ENST00000393287 LAD1O00515 517 aa9.16□□□□□ -0.94
ATXN3-203ENST00000393287 SRGNP10124 158 aa9.16□□□□□ -0.94
ATXN3-203ENST00000393287 LMNB1P20700 586 aa9.16□□□□□ -0.94
ATXN3-203ENST00000393287 TBC1D16Q8TBP0 767 aa9.16□□□□□ -0.94
ATXN3-203ENST00000393287 DCAF4Q8WV16 495 aa9.16□□□□□ -0.94
ATXN3-203ENST00000393287 LRRC4BQ9NT99 713 aa9.16□□□□□ -0.94
ATXN3-203ENST00000393287 IDEP14735 1019 aa9.16□□□□□ -0.94
ATXN3-203ENST00000393287 RCAN1P53805 252 aa9.16□□□□□ -0.94
ATXN3-203ENST00000393287 KIAA1328Q86T90 577 aa9.16□□□□□ -0.94
ATXN3-203ENST00000393287 ZNF512BQ96KM6 892 aaPredicted RBP9.16□□□□□ -0.94
ATXN3-203ENST00000393287 IWS1Q96ST2 819 aa9.16□□□□□ -0.94
ATXN3-203ENST00000393287 CLIP2Q9UDT6 1046 aa9.16□□□□□ -0.94
ATXN3-203ENST00000393287 ADD3Q9UEY8 706 aaKnown RBP9.16□□□□□ -0.94
ATXN3-203ENST00000393287 POLRMTO00411 1230 aaKnown RBP9.16□□□□□ -0.94
ATXN3-203ENST00000393287 BACH1O14867 736 aa9.16□□□□□ -0.94
ATXN3-203ENST00000393287 EHBP1Q8NDI1 1231 aa9.16□□□□□ -0.94
ATXN3-203ENST00000393287 CALUO43852 315 aaPredicted RBP9.16□□□□□ -0.94
ATXN3-203ENST00000393287 CUTAO60888 179 aa9.16□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 10.6 ms