RNA–Protein interactions for RNA: ENST00000393150.7

CASP4-201, Transcript of caspase 4, humanhuman

TSL 1 (best) BASIC

Gene CASP4, Length 1,340 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASP4-201ENST00000393150 ALG2Q9H553 416 aa10□□□□□ -0.81
CASP4-201ENST00000393150 ZNF70Q9UC06 446 aaPredicted RBP10□□□□□ -0.81
CASP4-201ENST00000393150 TCP10L2B9ZVM9 353 aa9.99□□□□□ -0.81
CASP4-201ENST00000393150 BTBD19C9JJ37 291 aa9.99□□□□□ -0.81
CASP4-201ENST00000393150 FRAT2O75474 233 aaPredicted RBP9.99□□□□□ -0.81
CASP4-201ENST00000393150 BMP8BP34820 402 aa9.99□□□□□ -0.81
CASP4-201ENST00000393150 CHRNDQ07001 517 aa9.99□□□□□ -0.81
CASP4-201ENST00000393150 PPIL2Q13356 520 aa9.99□□□□□ -0.81
CASP4-201ENST00000393150 PPP1R3FQ6ZSY5 799 aaPredicted RBP9.99□□□□□ -0.81
CASP4-201ENST00000393150 TXNRD3Q86VQ6 643 aa9.99□□□□□ -0.81
CASP4-201ENST00000393150 VPS37DQ86XT2 251 aa9.99□□□□□ -0.81
CASP4-201ENST00000393150 WRNIP1Q96S55 665 aa9.99□□□□□ -0.81
CASP4-201ENST00000393150 PARK7Q99497 189 aaKnown RBP9.99□□□□□ -0.81
CASP4-201ENST00000393150 ARHGAP39Q9C0H5 1083 aa9.99□□□□□ -0.81
CASP4-201ENST00000393150 PRO3102Q9H379 93 aa9.99□□□□□ -0.81
CASP4-201ENST00000393150 MYH16Q9H6N6 1097 aa9.99□□□□□ -0.81
CASP4-201ENST00000393150 PHAXQ9H814 394 aaKnown RBP9.99□□□□□ -0.81
CASP4-201ENST00000393150 CPA4Q9UI42 421 aa9.99□□□□□ -0.81
CASP4-201ENST00000393150 TTF2Q9UNY4 1162 aaKnown RBP9.99□□□□□ -0.81
CASP4-201ENST00000393150 MAP3K2Q9Y2U5 619 aa9.99□□□□□ -0.81
CASP4-201ENST00000393150 CHMP3Q9Y3E7 222 aa9.99□□□□□ -0.81
CASP4-201ENST00000393150 RANBP2P49792 3224 aaKnown RBP9.99□□□□□ -0.81
CASP4-201ENST00000393150 ADCY3O60266 1144 aa9.98□□□□□ -0.81
CASP4-201ENST00000393150 IL1R1P14778 569 aa9.98□□□□□ -0.81
CASP4-201ENST00000393150 PPATQ06203 517 aa9.98□□□□□ -0.81
CASP4-201ENST00000393150 NR1H3Q13133 447 aa9.98□□□□□ -0.81
CASP4-201ENST00000393150 IFIT5Q13325 482 aaKnown RBP9.98□□□□□ -0.81
CASP4-201ENST00000393150 MFSD14BQ5SR56 506 aa9.98□□□□□ -0.81
CASP4-201ENST00000393150 KSR2Q6VAB6 950 aa9.98□□□□□ -0.81
CASP4-201ENST00000393150 DZIP1LQ8IYY4 767 aaKnown RBP9.98□□□□□ -0.81
CASP4-201ENST00000393150 DDX55Q8NHQ9 600 aaKnown RBP eCLIP9.98□□□□□ -0.81
CASP4-201ENST00000393150 RUNDC1Q96C34 613 aa9.98□□□□□ -0.81
CASP4-201ENST00000393150 SHISA4Q96DD7 197 aa9.98□□□□□ -0.81
CASP4-201ENST00000393150 TDRD3Q9H7E2 651 aaKnown RBP9.98□□□□□ -0.81
CASP4-201ENST00000393150 ZBBXA8MT70 800 aa9.97□□□□□ -0.81
CASP4-201ENST00000393150 RNF223E7ERA6 249 aa9.97□□□□□ -0.81
CASP4-201ENST00000393150 PDHXO00330 501 aa9.97□□□□□ -0.81
CASP4-201ENST00000393150 ELL2O00472 640 aaPredicted RBP9.97□□□□□ -0.81
CASP4-201ENST00000393150 GNAI1P63096 354 aa9.97□□□□□ -0.81
CASP4-201ENST00000393150 PDXDC2PQ6P474 469 aa9.97□□□□□ -0.81
CASP4-201ENST00000393150 C17orf99Q6UX52 265 aa9.97□□□□□ -0.81
CASP4-201ENST00000393150 C15orf52Q6ZUT6 534 aaKnown RBP9.97□□□□□ -0.81
CASP4-201ENST00000393150 UBE3BQ7Z3V4 1068 aa9.97□□□□□ -0.81
CASP4-201ENST00000393150 ANKRD23Q86SG2 305 aa9.97□□□□□ -0.81
CASP4-201ENST00000393150 PHF6Q8IWS0 365 aaKnown RBP eCLIP9.97□□□□□ -0.81
CASP4-201ENST00000393150 PNMA1Q8ND90 353 aa9.97□□□□□ -0.81
CASP4-201ENST00000393150 CALR3Q96L12 384 aaKnown RBP9.97□□□□□ -0.81
CASP4-201ENST00000393150 PI4KAP2A4QPH2 592 aa9.96□□□□□ -0.82
CASP4-201ENST00000393150 PLIN1O60240 522 aa9.96□□□□□ -0.82
CASP4-201ENST00000393150 CAP1Q01518 475 aa9.96□□□□□ -0.82
CASP4-201ENST00000393150 LRIT3Q3SXY7 679 aa9.96□□□□□ -0.82
CASP4-201ENST00000393150 PLA2G2CQ5R387 149 aa9.96□□□□□ -0.82
CASP4-201ENST00000393150 UBE2Q1Q7Z7E8 422 aa9.96□□□□□ -0.82
CASP4-201ENST00000393150 TDHQ8IZJ6 230 aa9.96□□□□□ -0.82
CASP4-201ENST00000393150 CERS5Q8N5B7 392 aa9.96□□□□□ -0.82
CASP4-201ENST00000393150 PI4KAP1Q8N8J0 262 aa9.96□□□□□ -0.82
CASP4-201ENST00000393150 ARMC2Q8NEN0 867 aa9.96□□□□□ -0.82
CASP4-201ENST00000393150 TBC1D22AQ8WUA7 517 aa9.96□□□□□ -0.82
CASP4-201ENST00000393150 GPKOWQ92917 476 aaPredicted RBP eCLIP9.96□□□□□ -0.82
CASP4-201ENST00000393150 COA7Q96BR5 231 aa9.96□□□□□ -0.82
CASP4-201ENST00000393150 DEFB118Q96PH6 123 aa9.96□□□□□ -0.82
CASP4-201ENST00000393150 COL25A1Q9BXS0 654 aaPredicted RBP9.96□□□□□ -0.82
CASP4-201ENST00000393150 ZNF341Q9BYN7 854 aa9.96□□□□□ -0.82
CASP4-201ENST00000393150 UBE2OQ9C0C9 1292 aaKnown RBP9.96□□□□□ -0.82
CASP4-201ENST00000393150 TMEM39BQ9GZU3 492 aa9.96□□□□□ -0.82
CASP4-201ENST00000393150 CNNM1Q9NRU3 951 aa9.96□□□□□ -0.82
CASP4-201ENST00000393150 SOX1O00570 391 aaPredicted RBP9.95□□□□□ -0.82
CASP4-201ENST00000393150 TAF5LO75529 589 aa9.95□□□□□ -0.82
CASP4-201ENST00000393150 KLRK1P26718 216 aa9.95□□□□□ -0.82
CASP4-201ENST00000393150 HIBADHP31937 336 aaKnown RBP9.95□□□□□ -0.82
CASP4-201ENST00000393150 CRKP46108 304 aa9.95□□□□□ -0.82
CASP4-201ENST00000393150 PRKCZQ05513 592 aa9.95□□□□□ -0.82
CASP4-201ENST00000393150 CCDC57Q2TAC2 916 aa9.95□□□□□ -0.82
CASP4-201ENST00000393150 SH3BP5LQ7L8J4 393 aa9.95□□□□□ -0.82
CASP4-201ENST00000393150 FASTKD5Q7L8L6 764 aaKnown RBP9.95□□□□□ -0.82
CASP4-201ENST00000393150 C7orf61Q8IZ16 206 aa9.95□□□□□ -0.82
CASP4-201ENST00000393150 GOLGA6L2Q8N9W4 650 aaPredicted RBP9.95□□□□□ -0.82
CASP4-201ENST00000393150 ANKLE1Q8NAG6 615 aa9.95□□□□□ -0.82
CASP4-201ENST00000393150 TEKT1Q969V4 418 aa9.95□□□□□ -0.82
CASP4-201ENST00000393150 PAWRQ96IZ0 340 aaKnown RBP9.95□□□□□ -0.82
CASP4-201ENST00000393150 JAG2Q9Y219 1238 aa9.95□□□□□ -0.82
CASP4-201ENST00000393150 SSC5DA1L4H1 1573 aa9.95□□□□□ -0.82
CASP4-201ENST00000393150 COL6A3P12111 3177 aa9.95□□□□□ -0.82
CASP4-201ENST00000393150 FAM205AQ6ZU69 1335 aa9.94□□□□□ -0.82
CASP4-201ENST00000393150 TNPO2O14787 897 aaKnown RBP9.94□□□□□ -0.82
CASP4-201ENST00000393150 HDLBPQ00341 1268 aaKnown RBP9.94□□□□□ -0.82
CASP4-201ENST00000393150 RALBP1Q15311 655 aa9.94□□□□□ -0.82
CASP4-201ENST00000393150 FAM83AQ86UY5 434 aa9.94□□□□□ -0.82
CASP4-201ENST00000393150 CCDC146Q8IYE0 955 aa9.94□□□□□ -0.82
CASP4-201ENST00000393150 SMCR8Q8TEV9 937 aaPredicted RBP9.94□□□□□ -0.82
CASP4-201ENST00000393150 ZKSCAN4Q969J2 545 aaPredicted RBP9.94□□□□□ -0.82
CASP4-201ENST00000393150 PLA2G12BQ9BX93 195 aa9.94□□□□□ -0.82
CASP4-201ENST00000393150 PICK1Q9NRD5 415 aa9.94□□□□□ -0.82
CASP4-201ENST00000393150 MBIPQ9NS73 344 aa9.94□□□□□ -0.82
CASP4-201ENST00000393150 IFT57Q9NWB7 429 aa9.94□□□□□ -0.82
CASP4-201ENST00000393150 MTMR10Q9NXD2 777 aa9.94□□□□□ -0.82
CASP4-201ENST00000393150 GPSM3Q9Y4H4 160 aa9.94□□□□□ -0.82
CASP4-201ENST00000393150 PCDHAC2Q9Y5I4 1007 aa9.94□□□□□ -0.82
CASP4-201ENST00000393150 MAST3O60307 1309 aa9.94□□□□□ -0.82
CASP4-201ENST00000393150 NEURL1BA8MQ27 555 aa9.93□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms