RNA–Protein interactions for RNA: ENST00000393091.6

USP44-202, Transcript of ubiquitin specific peptidase 44, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP44, Length 3,161 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP44-202ENST00000393091 GUCY1A2P33402 732 aa15.73■□□□□ 0.11
USP44-202ENST00000393091 SCYL3Q8IZE3 742 aa15.73■□□□□ 0.11
USP44-202ENST00000393091 GNL3Q9BVP2 549 aaKnown RBP eCLIP15.73■□□□□ 0.11
USP44-202ENST00000393091 SNX14Q9Y5W7 946 aa15.73■□□□□ 0.11
USP44-202ENST00000393091 APPP05067 770 aa15.73■□□□□ 0.11
USP44-202ENST00000393091 RRP1BQ14684 758 aaKnown RBP15.73■□□□□ 0.11
USP44-202ENST00000393091 EXOSC10Q01780 885 aaKnown RBP15.73■□□□□ 0.11
USP44-202ENST00000393091 PPP1R3FQ6ZSY5 799 aaPredicted RBP15.73■□□□□ 0.11
USP44-202ENST00000393091 STOX1Q6ZVD7 989 aa15.73■□□□□ 0.11
USP44-202ENST00000393091 TMEM179Q6ZVK1 233 aa15.73■□□□□ 0.11
USP44-202ENST00000393091 ANKRD13AQ8IZ07 590 aa15.73■□□□□ 0.11
USP44-202ENST00000393091 ZNF526Q8TF50 670 aaPredicted RBP15.73■□□□□ 0.11
USP44-202ENST00000393091 TTC14Q96N46 770 aa15.73■□□□□ 0.11
USP44-202ENST00000393091 GBA2Q9HCG7 927 aaPredicted RBP15.73■□□□□ 0.11
USP44-202ENST00000393091 CREBZFQ9NS37 354 aa15.73■□□□□ 0.11
USP44-202ENST00000393091 MCCP23508 829 aa15.72■□□□□ 0.11
USP44-202ENST00000393091 EVX2Q03828 476 aa15.72■□□□□ 0.11
USP44-202ENST00000393091 MFSD6Q6ZSS7 791 aa15.72■□□□□ 0.11
USP44-202ENST00000393091 TBC1D32Q96NH3 1257 aa15.72■□□□□ 0.11
USP44-202ENST00000393091 SNCAIPQ9Y6H5 919 aa15.72■□□□□ 0.11
USP44-202ENST00000393091 NEDD4P46934 1319 aa15.72■□□□□ 0.11
USP44-202ENST00000393091 TRAF5O00463 557 aa15.72■□□□□ 0.11
USP44-202ENST00000393091 KCNH4Q9UQ05 1017 aa15.72■□□□□ 0.11
USP44-202ENST00000393091 CYP2D7A0A087X1C5 515 aa15.71■□□□□ 0.11
USP44-202ENST00000393091 RASSF10A6NK89 507 aa15.71■□□□□ 0.11
USP44-202ENST00000393091 EVCP57679 992 aa15.71■□□□□ 0.11
USP44-202ENST00000393091 SH3D19Q5HYK7 790 aa15.71■□□□□ 0.11
USP44-202ENST00000393091 ZSWIM6Q9HCJ5 1215 aa15.71■□□□□ 0.11
USP44-202ENST00000393091 NYAP2Q9P242 653 aa15.71■□□□□ 0.11
USP44-202ENST00000393091 TESPA1A2RU30 521 aaPredicted RBP15.71■□□□□ 0.11
USP44-202ENST00000393091 SPDYE5A6NIY4 337 aa15.71■□□□□ 0.11
USP44-202ENST00000393091 APLP1P51693 650 aa15.71■□□□□ 0.11
USP44-202ENST00000393091 PPATQ06203 517 aa15.71■□□□□ 0.11
USP44-202ENST00000393091 C2orf69Q8N8R5 385 aa15.71■□□□□ 0.11
USP44-202ENST00000393091 TMEM88BA6NKF7 163 aa15.71■□□□□ 0.1
USP44-202ENST00000393091 ASNSP08243 561 aa15.71■□□□□ 0.1
USP44-202ENST00000393091 RCAN1P53805 252 aa15.71■□□□□ 0.1
USP44-202ENST00000393091 CTDSPL2Q05D32 466 aa15.71■□□□□ 0.1
USP44-202ENST00000393091 NCOA7Q8NI08 942 aa15.71■□□□□ 0.1
USP44-202ENST00000393091 DYNLL2Q96FJ2 89 aa15.71■□□□□ 0.1
USP44-202ENST00000393091 C12orf42Q96LP6 360 aa15.71■□□□□ 0.1
USP44-202ENST00000393091 KIF2CQ99661 725 aa15.71■□□□□ 0.1
USP44-202ENST00000393091 ZBTB48P10074 688 aaPredicted RBP15.7■□□□□ 0.1
USP44-202ENST00000393091 CERKLQ49MI3 558 aaPredicted RBP15.7■□□□□ 0.1
USP44-202ENST00000393091 SAPCD2Q86UD0 394 aa15.7■□□□□ 0.1
USP44-202ENST00000393091 RASEFQ8IZ41 740 aa15.7■□□□□ 0.1
USP44-202ENST00000393091 ESR2Q92731 530 aa15.7■□□□□ 0.1
USP44-202ENST00000393091 MAP3K14Q99558 947 aa15.7■□□□□ 0.1
USP44-202ENST00000393091 ZBTB21Q9ULJ3 1066 aa15.7■□□□□ 0.1
USP44-202ENST00000393091 ZKSCAN1P17029 563 aaPredicted RBP15.7■□□□□ 0.1
USP44-202ENST00000393091 DGKHQ86XP1 1220 aa15.7■□□□□ 0.1
USP44-202ENST00000393091 SMIM22K7EJ46 135 aa15.69■□□□□ 0.1
USP44-202ENST00000393091 PPIL2Q13356 520 aa15.69■□□□□ 0.1
USP44-202ENST00000393091 SEC23AQ15436 765 aa15.69■□□□□ 0.1
USP44-202ENST00000393091 ZSCAN29Q8IWY8 852 aaPredicted RBP15.69■□□□□ 0.1
USP44-202ENST00000393091 REM2Q8IYK8 340 aaPredicted RBP15.69■□□□□ 0.1
USP44-202ENST00000393091 CRACR2BQ8N4Y2 399 aaPredicted RBP15.69■□□□□ 0.1
USP44-202ENST00000393091 PSMA5P28066 241 aa15.69■□□□□ 0.1
USP44-202ENST00000393091 ZCCHC17Q9NP64 241 aaKnown RBP15.69■□□□□ 0.1
USP44-202ENST00000393091 AFG3L2Q9Y4W6 797 aa15.69■□□□□ 0.1
USP44-202ENST00000393091 MINDY4BA8MYZ0 360 aa15.69■□□□□ 0.1
USP44-202ENST00000393091 CELF2O95319 508 aaKnown RBP15.69■□□□□ 0.1
USP44-202ENST00000393091 PTPRAP18433 802 aa15.69■□□□□ 0.1
USP44-202ENST00000393091 JAG1P78504 1218 aa15.69■□□□□ 0.1
USP44-202ENST00000393091 SIAH1Q8IUQ4 282 aa15.69■□□□□ 0.1
USP44-202ENST00000393091 TMEM87BQ96K49 555 aa15.69■□□□□ 0.1
USP44-202ENST00000393091 SLC45A1Q9Y2W3 748 aa15.69■□□□□ 0.1
USP44-202ENST00000393091 TAF6LQ9Y6J9 622 aa15.69■□□□□ 0.1
USP44-202ENST00000393091 ABCB5Q2M3G0 1257 aa15.68■□□□□ 0.1
USP44-202ENST00000393091 ERO1BQ86YB8 467 aa15.68■□□□□ 0.1
USP44-202ENST00000393091 GMCL1P1Q8NEA9 526 aa15.68■□□□□ 0.1
USP44-202ENST00000393091 KANSL2Q9H9L4 492 aa15.68■□□□□ 0.1
USP44-202ENST00000393091 IL17RBQ9NRM6 502 aa15.68■□□□□ 0.1
USP44-202ENST00000393091 FAM155AB1AL88 458 aaPredicted RBP15.68■□□□□ 0.1
USP44-202ENST00000393091 CXCL11O14625 94 aa15.68■□□□□ 0.1
USP44-202ENST00000393091 LIFRP42702 1097 aa15.68■□□□□ 0.1
USP44-202ENST00000393091 ANTXR2P58335 489 aa15.68■□□□□ 0.1
USP44-202ENST00000393091 VGLL4Q14135 290 aa15.68■□□□□ 0.1
USP44-202ENST00000393091 RCSD1Q6JBY9 416 aa15.67■□□□□ 0.1
USP44-202ENST00000393091 MTMR4Q9NYA4 1195 aa15.67■□□□□ 0.1
USP44-202ENST00000393091 USP17L5A8MUK1 530 aa15.67■□□□□ 0.1
USP44-202ENST00000393091 SLC10A3P09131 477 aa15.67■□□□□ 0.1
USP44-202ENST00000393091 AKR1B1P15121 316 aa15.67■□□□□ 0.1
USP44-202ENST00000393091 SGMS1Q86VZ5 419 aa15.67■□□□□ 0.1
USP44-202ENST00000393091 IGDCC4Q8TDY8 1250 aa15.67■□□□□ 0.1
USP44-202ENST00000393091 NEK1Q96PY6 1258 aa15.67■□□□□ 0.1
USP44-202ENST00000393091 WRNIP1Q96S55 665 aa15.67■□□□□ 0.1
USP44-202ENST00000393091 KIAA1683Q9H0B3 1180 aa15.67■□□□□ 0.1
USP44-202ENST00000393091 AS3MTQ9HBK9 375 aa15.67■□□□□ 0.1
USP44-202ENST00000393091 RBBP6Q7Z6E9 1792 aaKnown RBP15.67■□□□□ 0.1
USP44-202ENST00000393091 PLA2G6O60733 806 aa15.67■□□□□ 0.1
USP44-202ENST00000393091 DHX32Q7L7V1 743 aaKnown RBP15.67■□□□□ 0.1
USP44-202ENST00000393091 ZNF444Q8N0Y2 327 aaPredicted RBP15.67■□□□□ 0.1
USP44-202ENST00000393091 SLC44A5Q8NCS7 719 aa15.67■□□□□ 0.1
USP44-202ENST00000393091 TRIM34Q9BYJ4 488 aa15.67■□□□□ 0.1
USP44-202ENST00000393091 C22orf23Q9BZE7 217 aa15.67■□□□□ 0.1
USP44-202ENST00000393091 ZSWIM5Q9P217 1185 aa15.67■□□□□ 0.1
USP44-202ENST00000393091 RUFY3Q7L099 469 aa15.66■□□□□ 0.1
USP44-202ENST00000393091 NKX2-3Q8TAU0 364 aa15.66■□□□□ 0.1
USP44-202ENST00000393091 MKNK2Q9HBH9 465 aa15.66■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 10.7 ms