RNA–Protein interactions for RNA: ENST00000393083.2

PTN-202, Transcript of pleiotrophin, humanhuman

TSL 5 BASIC

Gene PTN, Length 1,599 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTN-202ENST00000393083 NAPBQ9H115 298 aa16.03■□□□□ 0.16
PTN-202ENST00000393083 ATP8A2Q9NTI2 1148 aa16.03■□□□□ 0.16
PTN-202ENST00000393083 PI4KBQ9UBF8 816 aa16.03■□□□□ 0.16
PTN-202ENST00000393083 GSG1L2A8MUP6 293 aa16.02■□□□□ 0.16
PTN-202ENST00000393083 PHF20L1A8MW92 1017 aa16.02■□□□□ 0.16
PTN-202ENST00000393083 ZNF213O14771 459 aa16.02■□□□□ 0.16
PTN-202ENST00000393083 COL9A3Q14050 684 aaPredicted RBP16.02■□□□□ 0.16
PTN-202ENST00000393083 RASAL3Q86YV0 1011 aa16.02■□□□□ 0.16
PTN-202ENST00000393083 ANKRD13AQ8IZ07 590 aa16.02■□□□□ 0.16
PTN-202ENST00000393083 IFNL3Q8IZI9 196 aa16.02■□□□□ 0.16
PTN-202ENST00000393083 WRNIP1Q96S55 665 aa16.02■□□□□ 0.16
PTN-202ENST00000393083 NACAP1Q9BZK3 213 aa16.02■□□□□ 0.16
PTN-202ENST00000393083 DDX60LQ5H9U9 1706 aaKnown RBP16.02■□□□□ 0.15
PTN-202ENST00000393083 WDR33Q9C0J8 1336 aaKnown RBP16.02■□□□□ 0.15
PTN-202ENST00000393083 SLC10A3P09131 477 aa16.01■□□□□ 0.15
PTN-202ENST00000393083 HMGB1P09429 215 aaKnown RBP16.01■□□□□ 0.15
PTN-202ENST00000393083 ECE1P42892 770 aa16.01■□□□□ 0.15
PTN-202ENST00000393083 TDO2P48775 406 aa16.01■□□□□ 0.15
PTN-202ENST00000393083 VGLL4Q14135 290 aa16.01■□□□□ 0.15
PTN-202ENST00000393083 FOXP4Q8IVH2 680 aaPredicted RBP16.01■□□□□ 0.15
PTN-202ENST00000393083 CCDC102AQ96A19 550 aa16.01■□□□□ 0.15
PTN-202ENST00000393083 TCEANC2Q96MN5 208 aa16.01■□□□□ 0.15
PTN-202ENST00000393083 DNAJC18Q9H819 358 aa16.01■□□□□ 0.15
PTN-202ENST00000393083 MCM9Q9NXL9 1143 aa16.01■□□□□ 0.15
PTN-202ENST00000393083 SIPA1L1O43166 1804 aa16.01■□□□□ 0.15
PTN-202ENST00000393083 FAM196BA6NMK8 535 aa16■□□□□ 0.15
PTN-202ENST00000393083 INPP5BP32019 993 aa16■□□□□ 0.15
PTN-202ENST00000393083 PLCD1P51178 756 aa16■□□□□ 0.15
PTN-202ENST00000393083 EVX2Q03828 476 aa16■□□□□ 0.15
PTN-202ENST00000393083 SLC4A8Q2Y0W8 1093 aa16■□□□□ 0.15
PTN-202ENST00000393083 PAXIP1Q6ZW49 1069 aaPredicted RBP16■□□□□ 0.15
PTN-202ENST00000393083 ZKSCAN4Q969J2 545 aaPredicted RBP16■□□□□ 0.15
PTN-202ENST00000393083 HERC5Q9UII4 1024 aaKnown RBP16■□□□□ 0.15
PTN-202ENST00000393083 LIMCH1Q9UPQ0 1083 aa16■□□□□ 0.15
PTN-202ENST00000393083 OTOFQ9HC10 1997 aa16■□□□□ 0.15
PTN-202ENST00000393083 CUL4AQ13619 759 aa16■□□□□ 0.15
PTN-202ENST00000393083 ANKRD1Q15327 319 aa16■□□□□ 0.15
PTN-202ENST00000393083 GIMAP6Q6P9H5 292 aa16■□□□□ 0.15
PTN-202ENST00000393083 TTC6Q86TZ1 520 aa16■□□□□ 0.15
PTN-202ENST00000393083 TBC1D10CQ8IV04 446 aa16■□□□□ 0.15
PTN-202ENST00000393083 SLC10A4Q96EP9 437 aa16■□□□□ 0.15
PTN-202ENST00000393083 EHD4Q9H223 541 aa16■□□□□ 0.15
PTN-202ENST00000393083 ALDH8A1Q9H2A2 487 aaPredicted RBP16■□□□□ 0.15
PTN-202ENST00000393083 XPO5Q9HAV4 1204 aaKnown RBP eCLIP16■□□□□ 0.15
PTN-202ENST00000393083 SNCAIPQ9Y6H5 919 aa16■□□□□ 0.15
PTN-202ENST00000393083 MYH1P12882 1939 aa15.99■□□□□ 0.15
PTN-202ENST00000393083 POLR3DP05423 398 aaPredicted RBP15.99■□□□□ 0.15
PTN-202ENST00000393083 HLA-DOAP06340 250 aa15.99■□□□□ 0.15
PTN-202ENST00000393083 CYP2D6P10635 497 aa15.99■□□□□ 0.15
PTN-202ENST00000393083 DDIT3P35638 169 aa15.99■□□□□ 0.15
PTN-202ENST00000393083 GRM1Q13255 1194 aa15.99■□□□□ 0.15
PTN-202ENST00000393083 RRP1BQ14684 758 aaKnown RBP15.99■□□□□ 0.15
PTN-202ENST00000393083 NOL9Q5SY16 702 aaKnown RBP15.99■□□□□ 0.15
PTN-202ENST00000393083 DHX32Q7L7V1 743 aaKnown RBP15.99■□□□□ 0.15
PTN-202ENST00000393083 JMYQ8N9B5 988 aa15.99■□□□□ 0.15
PTN-202ENST00000393083 ZIC5Q96T25 663 aa15.99■□□□□ 0.15
PTN-202ENST00000393083 LARP6Q9BRS8 491 aaKnown RBP15.99■□□□□ 0.15
PTN-202ENST00000393083 NBPF3Q9H094 633 aa15.99■□□□□ 0.15
PTN-202ENST00000393083 CHMP5Q9NZZ3 219 aa15.99■□□□□ 0.15
PTN-202ENST00000393083 USP17L12C9JPN9 530 aa15.98■□□□□ 0.15
PTN-202ENST00000393083 USP17L21D6R901 530 aa15.98■□□□□ 0.15
PTN-202ENST00000393083 SMIM22K7EJ46 135 aa15.98■□□□□ 0.15
PTN-202ENST00000393083 AOC2O75106 756 aa15.98■□□□□ 0.15
PTN-202ENST00000393083 LARGE1O95461 756 aa15.98■□□□□ 0.15
PTN-202ENST00000393083 GJA5P36382 358 aa15.98■□□□□ 0.15
PTN-202ENST00000393083 GABPAQ06546 454 aa15.98■□□□□ 0.15
PTN-202ENST00000393083 TOB2Q14106 344 aaPredicted RBP15.98■□□□□ 0.15
PTN-202ENST00000393083 C12orf60Q5U649 245 aa15.98■□□□□ 0.15
PTN-202ENST00000393083 SPRYD7Q5W111 196 aa15.98■□□□□ 0.15
PTN-202ENST00000393083 CTR9Q6PD62 1173 aa15.98■□□□□ 0.15
PTN-202ENST00000393083 RALYLQ86SE5 291 aaKnown RBP15.98■□□□□ 0.15
PTN-202ENST00000393083 NCOA7Q8NI08 942 aa15.98■□□□□ 0.15
PTN-202ENST00000393083 ZSCAN31Q96LW9 406 aaPredicted RBP15.98■□□□□ 0.15
PTN-202ENST00000393083 ELP3Q9H9T3 547 aa15.98■□□□□ 0.15
PTN-202ENST00000393083 SERPINB13Q9UIV8 391 aa15.98■□□□□ 0.15
PTN-202ENST00000393083 CSADQ9Y600 493 aa15.98■□□□□ 0.15
PTN-202ENST00000393083 CYP2D7A0A087X1C5 515 aa15.97■□□□□ 0.15
PTN-202ENST00000393083 CTNND1O60716 968 aaKnown RBP15.97■□□□□ 0.15
PTN-202ENST00000393083 MAP2K2P36507 400 aa15.97■□□□□ 0.15
PTN-202ENST00000393083 NOGQ13253 232 aa15.97■□□□□ 0.15
PTN-202ENST00000393083 Q6ZUG5 572 aa15.97■□□□□ 0.15
PTN-202ENST00000393083 CNKSR2Q8WXI2 1034 aa15.97■□□□□ 0.15
PTN-202ENST00000393083 WNK4Q96J92 1243 aa15.97■□□□□ 0.15
PTN-202ENST00000393083 SH2B1Q9NRF2 756 aaPredicted RBP15.97■□□□□ 0.15
PTN-202ENST00000393083 CIZ1Q9ULV3 898 aaPredicted RBP15.97■□□□□ 0.15
PTN-202ENST00000393083 THSD7BQ9C0I4 1608 aa15.97■□□□□ 0.15
PTN-202ENST00000393083 PCNTO95613 3336 aa15.97■□□□□ 0.15
PTN-202ENST00000393083 FGD1P98174 961 aa15.96■□□□□ 0.15
PTN-202ENST00000393083 CTDSPL2Q05D32 466 aa15.96■□□□□ 0.15
PTN-202ENST00000393083 TRDNQ13061 729 aa15.96■□□□□ 0.15
PTN-202ENST00000393083 SBK1Q52WX2 424 aa15.96■□□□□ 0.15
PTN-202ENST00000393083 TATDN1Q6P1N9 297 aa15.96■□□□□ 0.15
PTN-202ENST00000393083 MB21D2Q8IYB1 491 aaPredicted RBP15.96■□□□□ 0.15
PTN-202ENST00000393083 CRACR2BQ8N4Y2 399 aaPredicted RBP15.96■□□□□ 0.15
PTN-202ENST00000393083 OPTNQ96CV9 577 aa15.96■□□□□ 0.15
PTN-202ENST00000393083 LRRC2Q9BYS8 371 aa15.96■□□□□ 0.15
PTN-202ENST00000393083 ZBTB4Q9P1Z0 1013 aaPredicted RBP15.96■□□□□ 0.15
PTN-202ENST00000393083 SPDYE5A6NIY4 337 aa15.96■□□□□ 0.14
PTN-202ENST00000393083 ZBTB48P10074 688 aaPredicted RBP15.96■□□□□ 0.14
PTN-202ENST00000393083 CAP2P40123 477 aa15.96■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms