RNA–Protein interactions for RNA: ENST00000392770.6

SCN3B-202, Transcript of sodium voltage-gated channel beta subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCN3B, Length 6,061 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN3B-202ENST00000392770 C1orf167Q5SNV9 1468 aa18.67■□□□□ 0.58
SCN3B-202ENST00000392770 SYNRGQ9UMZ2 1314 aa18.67■□□□□ 0.58
SCN3B-202ENST00000392770 PHACTR2O75167 634 aa18.67■□□□□ 0.58
SCN3B-202ENST00000392770 CYP21A2P08686 494 aa18.67■□□□□ 0.58
SCN3B-202ENST00000392770 DRC1Q96MC2 740 aa18.67■□□□□ 0.58
SCN3B-202ENST00000392770 XPO5Q9HAV4 1204 aaKnown RBP eCLIP18.67■□□□□ 0.58
SCN3B-202ENST00000392770 NRXN1Q9ULB1 1477 aa18.67■□□□□ 0.58
SCN3B-202ENST00000392770 FRMPD2Q68DX3 1309 aaPredicted RBP18.67■□□□□ 0.58
SCN3B-202ENST00000392770 CNNM4Q6P4Q7 775 aa18.67■□□□□ 0.58
SCN3B-202ENST00000392770 SRP68Q9UHB9 627 aaKnown RBP18.67■□□□□ 0.58
SCN3B-202ENST00000392770 LEMD3Q9Y2U8 911 aa18.67■□□□□ 0.58
SCN3B-202ENST00000392770 NCAPH2Q6IBW4 605 aa18.67■□□□□ 0.58
SCN3B-202ENST00000392770 NLGN1Q8N2Q7 840 aa18.67■□□□□ 0.58
SCN3B-202ENST00000392770 BIN2Q9UBW5 565 aaPredicted RBP18.67■□□□□ 0.58
SCN3B-202ENST00000392770 MRVI1Q9Y6F6 885 aa18.67■□□□□ 0.58
SCN3B-202ENST00000392770 POSTNQ15063 836 aa18.66■□□□□ 0.58
SCN3B-202ENST00000392770 CALCRLQ16602 461 aa18.66■□□□□ 0.58
SCN3B-202ENST00000392770 HAUS3Q68CZ6 603 aa18.66■□□□□ 0.58
SCN3B-202ENST00000392770 HS2ST1Q7LGA3 356 aa18.66■□□□□ 0.58
SCN3B-202ENST00000392770 ARHGAP30Q7Z6I6 1101 aaPredicted RBP18.66■□□□□ 0.58
SCN3B-202ENST00000392770 TMEM63CQ9P1W3 806 aa18.66■□□□□ 0.58
SCN3B-202ENST00000392770 KRT83P78385 493 aa18.66■□□□□ 0.58
SCN3B-202ENST00000392770 KRT27Q7Z3Y8 459 aa18.66■□□□□ 0.58
SCN3B-202ENST00000392770 ANKRD62A6NC57 917 aa18.66■□□□□ 0.58
SCN3B-202ENST00000392770 DDAH1O94760 285 aa18.66■□□□□ 0.58
SCN3B-202ENST00000392770 CBX1P83916 185 aa18.66■□□□□ 0.58
SCN3B-202ENST00000392770 EPHA10Q5JZY3 1008 aa18.66■□□□□ 0.58
SCN3B-202ENST00000392770 MAPK8IP1Q9UQF2 711 aa18.66■□□□□ 0.58
SCN3B-202ENST00000392770 PUS7LQ9H0K6 701 aaKnown RBP18.65■□□□□ 0.58
SCN3B-202ENST00000392770 DYNLL1P63167 89 aaKnown RBP18.65■□□□□ 0.58
SCN3B-202ENST00000392770 NOSTRINQ8IVI9 506 aa18.65■□□□□ 0.58
SCN3B-202ENST00000392770 UIMC1Q96RL1 719 aa18.65■□□□□ 0.58
SCN3B-202ENST00000392770 LRWD1Q9UFC0 647 aa18.65■□□□□ 0.58
SCN3B-202ENST00000392770 SMCO2A6NFE2 343 aa18.65■□□□□ 0.58
SCN3B-202ENST00000392770 PPP1R2P41236 205 aa18.65■□□□□ 0.58
SCN3B-202ENST00000392770 BACH1O14867 736 aa18.65■□□□□ 0.58
SCN3B-202ENST00000392770 KARSQ15046 597 aaKnown RBP18.65■□□□□ 0.58
SCN3B-202ENST00000392770 CKAP4Q07065 602 aaKnown RBP18.65■□□□□ 0.58
SCN3B-202ENST00000392770 TTLL11Q8NHH1 800 aa18.65■□□□□ 0.58
SCN3B-202ENST00000392770 OVOS2A0A0J9YW53 1432 aa18.65■□□□□ 0.58
SCN3B-202ENST00000392770 OVOS2Q6IE36 1432 aa18.65■□□□□ 0.58
SCN3B-202ENST00000392770 ADAMTS13Q76LX8 1427 aa18.65■□□□□ 0.58
SCN3B-202ENST00000392770 KIAA0754O94854 1291 aa18.64■□□□□ 0.58
SCN3B-202ENST00000392770 PNOCQ13519 176 aa18.64■□□□□ 0.58
SCN3B-202ENST00000392770 HLTFQ14527 1009 aaKnown RBP eCLIP18.64■□□□□ 0.58
SCN3B-202ENST00000392770 KIAA0825Q8IV33 1275 aa18.64■□□□□ 0.58
SCN3B-202ENST00000392770 SNX29Q8TEQ0 813 aa18.64■□□□□ 0.58
SCN3B-202ENST00000392770 NOC4LQ9BVI4 516 aaKnown RBP18.64■□□□□ 0.58
SCN3B-202ENST00000392770 DIP2BQ9P265 1576 aa18.64■□□□□ 0.58
SCN3B-202ENST00000392770 IFFO1Q0D2I5 559 aa18.64■□□□□ 0.57
SCN3B-202ENST00000392770 DCAF17Q5H9S7 520 aaPredicted RBP18.64■□□□□ 0.57
SCN3B-202ENST00000392770 CTNNA2P26232 953 aa18.64■□□□□ 0.57
SCN3B-202ENST00000392770 CABP7Q86V35 215 aa18.64■□□□□ 0.57
SCN3B-202ENST00000392770 PNMA1Q8ND90 353 aa18.64■□□□□ 0.57
SCN3B-202ENST00000392770 CCDC42Q96M95 316 aa18.64■□□□□ 0.57
SCN3B-202ENST00000392770 AKR1B15C9JRZ8 316 aaPredicted RBP18.64■□□□□ 0.57
SCN3B-202ENST00000392770 DYNC1I1O14576 645 aa18.64■□□□□ 0.57
SCN3B-202ENST00000392770 PAK1Q13153 545 aa18.64■□□□□ 0.57
SCN3B-202ENST00000392770 USP28Q96RU2 1077 aa18.64■□□□□ 0.57
SCN3B-202ENST00000392770 FRMPD1Q5SYB0 1578 aa18.64■□□□□ 0.57
SCN3B-202ENST00000392770 ADALQ6DHV7 355 aa18.63■□□□□ 0.57
SCN3B-202ENST00000392770 REXO1Q8N1G1 1221 aaKnown RBP18.63■□□□□ 0.57
SCN3B-202ENST00000392770 CRB1P82279 1406 aa18.63■□□□□ 0.57
SCN3B-202ENST00000392770 ITSN1Q15811 1721 aa18.63■□□□□ 0.57
SCN3B-202ENST00000392770 TRAF5O00463 557 aa18.63■□□□□ 0.57
SCN3B-202ENST00000392770 FANCCQ00597 558 aa18.63■□□□□ 0.57
SCN3B-202ENST00000392770 ZNF772Q68DY9 489 aaPredicted RBP18.63■□□□□ 0.57
SCN3B-202ENST00000392770 LRRC47Q8N1G4 583 aaKnown RBP18.63■□□□□ 0.57
SCN3B-202ENST00000392770 LCORLQ8N3X6 602 aa18.63■□□□□ 0.57
SCN3B-202ENST00000392770 OSBP2Q969R2 916 aa18.63■□□□□ 0.57
SCN3B-202ENST00000392770 LZTFL1Q9NQ48 299 aa18.63■□□□□ 0.57
SCN3B-202ENST00000392770 LUC7L2Q9Y383 392 aaKnown RBP18.63■□□□□ 0.57
SCN3B-202ENST00000392770 CTAGE9A4FU28 777 aa18.63■□□□□ 0.57
SCN3B-202ENST00000392770 ZNF75DP51815 510 aa18.63■□□□□ 0.57
SCN3B-202ENST00000392770 CCDC113Q9H0I3 377 aa18.63■□□□□ 0.57
SCN3B-202ENST00000392770 VPS16Q9H269 839 aa18.63■□□□□ 0.57
SCN3B-202ENST00000392770 ECM2O94769 699 aaPredicted RBP18.63■□□□□ 0.57
SCN3B-202ENST00000392770 GOLGA8HP0CJ92 632 aa18.63■□□□□ 0.57
SCN3B-202ENST00000392770 GRM1Q13255 1194 aa18.63■□□□□ 0.57
SCN3B-202ENST00000392770 MLKLQ8NB16 471 aa18.63■□□□□ 0.57
SCN3B-202ENST00000392770 TACC1O75410 805 aa18.63■□□□□ 0.57
SCN3B-202ENST00000392770 CNGA4Q8IV77 575 aa18.63■□□□□ 0.57
SCN3B-202ENST00000392770 SEPT12Q8IYM1 358 aa18.63■□□□□ 0.57
SCN3B-202ENST00000392770 TCHPQ9BT92 498 aa18.63■□□□□ 0.57
SCN3B-202ENST00000392770 BLZF1Q9H2G9 400 aa18.63■□□□□ 0.57
SCN3B-202ENST00000392770 SERTAD1Q9UHV2 236 aa18.63■□□□□ 0.57
SCN3B-202ENST00000392770 TCP10L2B9ZVM9 353 aa18.62■□□□□ 0.57
SCN3B-202ENST00000392770 PFKFB1P16118 471 aa18.62■□□□□ 0.57
SCN3B-202ENST00000392770 BLIDQ8IZY5 108 aa18.62■□□□□ 0.57
SCN3B-202ENST00000392770 BAG1Q99933 345 aaPredicted RBP18.62■□□□□ 0.57
SCN3B-202ENST00000392770 PIH1D3Q9NQM4 214 aaKnown RBP18.62■□□□□ 0.57
SCN3B-202ENST00000392770 DDX39AO00148 427 aaKnown RBP18.62■□□□□ 0.57
SCN3B-202ENST00000392770 MYCLP12524 364 aaPredicted RBP18.62■□□□□ 0.57
SCN3B-202ENST00000392770 RPL13P26373 211 aaKnown RBP18.62■□□□□ 0.57
SCN3B-202ENST00000392770 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP18.62■□□□□ 0.57
SCN3B-202ENST00000392770 CTAGE15A4D2H0 777 aa18.62■□□□□ 0.57
SCN3B-202ENST00000392770 CTAGE8P0CG41 777 aa18.62■□□□□ 0.57
SCN3B-202ENST00000392770 CTAGE6Q86UF2 777 aa18.62■□□□□ 0.57
SCN3B-202ENST00000392770 CTAGE4Q8IX94 777 aa18.62■□□□□ 0.57
SCN3B-202ENST00000392770 KIFC2Q96AC6 838 aa18.62■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms