RNA–Protein interactions for RNA: ENST00000392542.6

RFC5-201, Transcript of replication factor C subunit 5, humanhuman

TSL 2 BASIC

Gene RFC5, Length 2,449 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC5-201ENST00000392542 ZSCAN10Q96SZ4 725 aaPredicted RBP14.13□□□□□ -0.15
RFC5-201ENST00000392542 WTIPA6NIX2 430 aaPredicted RBP14.12□□□□□ -0.15
RFC5-201ENST00000392542 SMIM22K7EJ46 135 aa14.12□□□□□ -0.15
RFC5-201ENST00000392542 FOXN1O15353 648 aa14.12□□□□□ -0.15
RFC5-201ENST00000392542 KCNQ2O43526 872 aa14.12□□□□□ -0.15
RFC5-201ENST00000392542 UBASH3AP57075 661 aa14.12□□□□□ -0.15
RFC5-201ENST00000392542 AKAP17AQ02040 695 aaKnown RBP14.12□□□□□ -0.15
RFC5-201ENST00000392542 ENAHQ8N8S7 591 aaPredicted RBP14.12□□□□□ -0.15
RFC5-201ENST00000392542 LINC00116Q8NCU8 138 aa14.12□□□□□ -0.15
RFC5-201ENST00000392542 FAM84BQ96KN1 310 aaPredicted RBP14.12□□□□□ -0.15
RFC5-201ENST00000392542 SRPRBQ9Y5M8 271 aaKnown RBP14.12□□□□□ -0.15
RFC5-201ENST00000392542 MYH13Q9UKX3 1938 aa14.12□□□□□ -0.15
RFC5-201ENST00000392542 SERPINC1P01008 464 aa14.12□□□□□ -0.15
RFC5-201ENST00000392542 PCP11498 1178 aaKnown RBP14.12□□□□□ -0.15
RFC5-201ENST00000392542 POSTNQ15063 836 aa14.12□□□□□ -0.15
RFC5-201ENST00000392542 E4F1Q66K89 784 aaPredicted RBP14.12□□□□□ -0.15
RFC5-201ENST00000392542 DPF2Q92785 391 aa14.12□□□□□ -0.15
RFC5-201ENST00000392542 NOL10Q9BSC4 688 aaKnown RBP14.12□□□□□ -0.15
RFC5-201ENST00000392542 MORC2Q9Y6X9 1032 aaPredicted RBP14.12□□□□□ -0.15
RFC5-201ENST00000392542 PSDA5PKW4 1024 aaPredicted RBP14.11□□□□□ -0.15
RFC5-201ENST00000392542 POLR2DO15514 142 aaKnown RBP14.11□□□□□ -0.15
RFC5-201ENST00000392542 FGRP09769 529 aa14.11□□□□□ -0.15
RFC5-201ENST00000392542 XBP1P17861 261 aa14.11□□□□□ -0.15
RFC5-201ENST00000392542 BMP6P22004 513 aa14.11□□□□□ -0.15
RFC5-201ENST00000392542 NT5DC1Q5TFE4 455 aa14.11□□□□□ -0.15
RFC5-201ENST00000392542 SHISA4Q96DD7 197 aa14.11□□□□□ -0.15
RFC5-201ENST00000392542 CABP5Q9NP86 173 aa14.11□□□□□ -0.15
RFC5-201ENST00000392542 SERTAD1Q9UHV2 236 aa14.11□□□□□ -0.15
RFC5-201ENST00000392542 MAN1B1Q9UKM7 699 aa14.11□□□□□ -0.15
RFC5-201ENST00000392542 CYP2D7A0A087X1C5 515 aa14.11□□□□□ -0.15
RFC5-201ENST00000392542 SEMA3EO15041 775 aa14.11□□□□□ -0.15
RFC5-201ENST00000392542 RGL2O15211 777 aa14.11□□□□□ -0.15
RFC5-201ENST00000392542 PRPF3O43395 683 aaKnown RBP14.11□□□□□ -0.15
RFC5-201ENST00000392542 PDE4BQ07343 736 aa14.11□□□□□ -0.15
RFC5-201ENST00000392542 FUT2Q10981 343 aa14.11□□□□□ -0.15
RFC5-201ENST00000392542 PKN1Q16512 942 aa14.11□□□□□ -0.15
RFC5-201ENST00000392542 SLC10A5Q5PT55 438 aa14.11□□□□□ -0.15
RFC5-201ENST00000392542 IFIT1BQ5T764 474 aaKnown RBP14.11□□□□□ -0.15
RFC5-201ENST00000392542 CATIPQ7Z7H3 387 aa14.11□□□□□ -0.15
RFC5-201ENST00000392542 ZNF384Q8TF68 577 aa14.11□□□□□ -0.15
RFC5-201ENST00000392542 CELF1Q92879 486 aaKnown RBP14.11□□□□□ -0.15
RFC5-201ENST00000392542 RBM28Q9NW13 759 aaKnown RBP14.11□□□□□ -0.15
RFC5-201ENST00000392542 CFAP100Q494V2 611 aa14.1□□□□□ -0.15
RFC5-201ENST00000392542 PPP4R3BQ5MIZ7 849 aa14.1□□□□□ -0.15
RFC5-201ENST00000392542 FBXO33Q7Z6M2 555 aa14.1□□□□□ -0.15
RFC5-201ENST00000392542 KIF18AQ8NI77 898 aa14.1□□□□□ -0.15
RFC5-201ENST00000392542 PPP1R13BQ96KQ4 1090 aa14.1□□□□□ -0.15
RFC5-201ENST00000392542 FANCLQ9NW38 375 aa14.1□□□□□ -0.15
RFC5-201ENST00000392542 VPS54Q9P1Q0 977 aa14.1□□□□□ -0.15
RFC5-201ENST00000392542 LAMB1P07942 1786 aa14.1□□□□□ -0.15
RFC5-201ENST00000392542 PRR29P0C7W0 189 aa14.1□□□□□ -0.15
RFC5-201ENST00000392542 CALM1P0DP23 149 aa14.1□□□□□ -0.15
RFC5-201ENST00000392542 CALM2P0DP24 149 aa14.1□□□□□ -0.15
RFC5-201ENST00000392542 CALM3P0DP25 149 aa14.1□□□□□ -0.15
RFC5-201ENST00000392542 ATP2B1P20020 1258 aa14.1□□□□□ -0.15
RFC5-201ENST00000392542 KRT2P35908 639 aa14.1□□□□□ -0.15
RFC5-201ENST00000392542 SARSP49591 514 aaKnown RBP14.1□□□□□ -0.15
RFC5-201ENST00000392542 KANK3Q6NY19 840 aa14.1□□□□□ -0.15
RFC5-201ENST00000392542 CTR9Q6PD62 1173 aa14.1□□□□□ -0.15
RFC5-201ENST00000392542 IQCA1Q86XH1 822 aa14.1□□□□□ -0.15
RFC5-201ENST00000392542 VSTM4Q8IW00 320 aa14.1□□□□□ -0.15
RFC5-201ENST00000392542 SMARCE1Q969G3 411 aa14.1□□□□□ -0.15
RFC5-201ENST00000392542 PHF20Q9BVI0 1012 aa14.1□□□□□ -0.15
RFC5-201ENST00000392542 TRIM75PA6NK02 468 aa14.09□□□□□ -0.15
RFC5-201ENST00000392542 ACTN4O43707 911 aaKnown RBP14.09□□□□□ -0.15
RFC5-201ENST00000392542 GTF2E1P29083 439 aaPredicted RBP14.09□□□□□ -0.15
RFC5-201ENST00000392542 MORC3Q14149 939 aa14.09□□□□□ -0.15
RFC5-201ENST00000392542 TRIML1Q8N9V2 468 aa14.09□□□□□ -0.15
RFC5-201ENST00000392542 MLKLQ8NB16 471 aa14.09□□□□□ -0.15
RFC5-201ENST00000392542 NSUN4Q96CB9 384 aaKnown RBP14.09□□□□□ -0.15
RFC5-201ENST00000392542 CSRNP2Q9H175 543 aa14.09□□□□□ -0.15
RFC5-201ENST00000392542 DACH1Q9UI36 760 aa14.09□□□□□ -0.15
RFC5-201ENST00000392542 PDS5AQ29RF7 1337 aaKnown RBP14.09□□□□□ -0.15
RFC5-201ENST00000392542 CNTNAP4Q9C0A0 1308 aa14.09□□□□□ -0.15
RFC5-201ENST00000392542 MAST2Q6P0Q8 1798 aa14.09□□□□□ -0.15
RFC5-201ENST00000392542 PRDM1O75626 825 aa14.09□□□□□ -0.15
RFC5-201ENST00000392542 DDAH1O94760 285 aa14.09□□□□□ -0.15
RFC5-201ENST00000392542 PLEKHA8P1O95397 391 aa14.09□□□□□ -0.15
RFC5-201ENST00000392542 TROAPQ12815 778 aa14.09□□□□□ -0.15
RFC5-201ENST00000392542 TBC1D9BQ66K14 1250 aa14.09□□□□□ -0.15
RFC5-201ENST00000392542 BICDL1Q6ZP65 573 aa14.09□□□□□ -0.15
RFC5-201ENST00000392542 AATFQ9NY61 560 aaKnown RBP eCLIP14.09□□□□□ -0.15
RFC5-201ENST00000392542 DDX52Q9Y2R4 599 aaKnown RBP eCLIP14.09□□□□□ -0.15
RFC5-201ENST00000392542 FAM205CA6NFA0 338 aa14.08□□□□□ -0.16
RFC5-201ENST00000392542 NUTM2BA6NNL0 878 aaPredicted RBP14.08□□□□□ -0.16
RFC5-201ENST00000392542 NUTM2EB1AL46 878 aaPredicted RBP14.08□□□□□ -0.16
RFC5-201ENST00000392542 NUTM2AQ8IVF1 878 aaPredicted RBP14.08□□□□□ -0.16
RFC5-201ENST00000392542 COL24A1Q17RW2 1714 aa14.08□□□□□ -0.16
RFC5-201ENST00000392542 USP17L12C9JPN9 530 aa14.07□□□□□ -0.16
RFC5-201ENST00000392542 USP17L21D6R901 530 aa14.07□□□□□ -0.16
RFC5-201ENST00000392542 ORC4O43929 436 aa14.07□□□□□ -0.16
RFC5-201ENST00000392542 TOP1P11387 765 aaKnown RBP14.07□□□□□ -0.16
RFC5-201ENST00000392542 TMTC3Q6ZXV5 915 aa14.07□□□□□ -0.16
RFC5-201ENST00000392542 V9GY48 417 aaPredicted RBP14.07□□□□□ -0.16
RFC5-201ENST00000392542 TMEM232C9JQI7 657 aa14.07□□□□□ -0.16
RFC5-201ENST00000392542 CCP110O43303 1012 aa14.07□□□□□ -0.16
RFC5-201ENST00000392542 TUBB4AP04350 444 aa14.07□□□□□ -0.16
RFC5-201ENST00000392542 KLRK1P26718 216 aa14.07□□□□□ -0.16
RFC5-201ENST00000392542 RPS8P62241 208 aaKnown RBP14.07□□□□□ -0.16
RFC5-201ENST00000392542 MECOMQ03112 1051 aa14.07□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 205.9 ms