RNA–Protein interactions for RNA: ENST00000392496.3

SPHK1-202, Transcript of sphingosine kinase 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SPHK1, Length 1,779 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPHK1-202ENST00000392496 DYNLL2Q96FJ2 89 aa24.83■■□□□ 1.57
SPHK1-202ENST00000392496 SLC26A6Q9BXS9 759 aa24.83■■□□□ 1.57
SPHK1-202ENST00000392496 CD2APQ9Y5K6 639 aa24.83■■□□□ 1.57
SPHK1-202ENST00000392496 ECE2O60344 883 aa24.82■■□□□ 1.56
SPHK1-202ENST00000392496 PLCD1P51178 756 aa24.82■■□□□ 1.56
SPHK1-202ENST00000392496 KIAA2012Q0VF49 1180 aa24.82■■□□□ 1.56
SPHK1-202ENST00000392496 OTUD7BQ6GQQ9 843 aa24.82■■□□□ 1.56
SPHK1-202ENST00000392496 BRAPQ7Z569 592 aa24.82■■□□□ 1.56
SPHK1-202ENST00000392496 GAS2L3Q86XJ1 694 aa24.82■■□□□ 1.56
SPHK1-202ENST00000392496 TRIM22Q8IYM9 498 aa24.82■■□□□ 1.56
SPHK1-202ENST00000392496 MKNK2Q9HBH9 465 aa24.82■■□□□ 1.56
SPHK1-202ENST00000392496 RBM28Q9NW13 759 aaKnown RBP24.82■■□□□ 1.56
SPHK1-202ENST00000392496 SAP30BPQ9UHR5 308 aaKnown RBP24.82■■□□□ 1.56
SPHK1-202ENST00000392496 ZNF646O15015 1829 aaPredicted RBP24.82■■□□□ 1.56
SPHK1-202ENST00000392496 F8W031 263 aaPredicted RBP24.82■■□□□ 1.56
SPHK1-202ENST00000392496 MRE11P49959 708 aa24.82■■□□□ 1.56
SPHK1-202ENST00000392496 SLC4A8Q2Y0W8 1093 aa24.82■■□□□ 1.56
SPHK1-202ENST00000392496 NBPF11Q86T75 865 aa24.82■■□□□ 1.56
SPHK1-202ENST00000392496 CRACR2BQ8N4Y2 399 aaPredicted RBP24.82■■□□□ 1.56
SPHK1-202ENST00000392496 TTLL6Q8N841 843 aa24.82■■□□□ 1.56
SPHK1-202ENST00000392496 MXD3Q9BW11 206 aa24.82■■□□□ 1.56
SPHK1-202ENST00000392496 MRIQ9BWK5 157 aa24.82■■□□□ 1.56
SPHK1-202ENST00000392496 KIF13BQ9NQT8 1826 aa24.82■■□□□ 1.56
SPHK1-202ENST00000392496 TGFB2P61812 414 aa24.81■■□□□ 1.56
SPHK1-202ENST00000392496 TFAP4Q01664 338 aa24.81■■□□□ 1.56
SPHK1-202ENST00000392496 TROAPQ12815 778 aa24.81■■□□□ 1.56
SPHK1-202ENST00000392496 ANKS1AQ92625 1134 aa24.81■■□□□ 1.56
SPHK1-202ENST00000392496 TEKT1Q969V4 418 aa24.81■■□□□ 1.56
SPHK1-202ENST00000392496 TCP11L1Q9NUJ3 509 aa24.81■■□□□ 1.56
SPHK1-202ENST00000392496 DACT2Q5SW24 774 aa24.8■■□□□ 1.56
SPHK1-202ENST00000392496 C16orf86Q6ZW13 317 aa24.8■■□□□ 1.56
SPHK1-202ENST00000392496 DGKHQ86XP1 1220 aa24.8■■□□□ 1.56
SPHK1-202ENST00000392496 AIFM3Q96NN9 605 aa24.8■■□□□ 1.56
SPHK1-202ENST00000392496 RCOR1Q9UKL0 485 aa24.8■■□□□ 1.56
SPHK1-202ENST00000392496 DEXIO95424 95 aa24.8■■□□□ 1.56
SPHK1-202ENST00000392496 KIF23Q02241 960 aaPredicted RBP24.8■■□□□ 1.56
SPHK1-202ENST00000392496 TRIM29Q14134 588 aa24.8■■□□□ 1.56
SPHK1-202ENST00000392496 KRT40Q6A162 431 aa24.8■■□□□ 1.56
SPHK1-202ENST00000392496 ZNF444Q8N0Y2 327 aaPredicted RBP24.8■■□□□ 1.56
SPHK1-202ENST00000392496 SCN9AQ15858 1988 aa24.8■■□□□ 1.56
SPHK1-202ENST00000392496 USP17L3A6NCW0 530 aa24.79■■□□□ 1.56
SPHK1-202ENST00000392496 USP17L4A6NCW7 530 aa24.79■■□□□ 1.56
SPHK1-202ENST00000392496 C21orf2O43822 256 aa24.79■■□□□ 1.56
SPHK1-202ENST00000392496 NMT2O60551 498 aa24.79■■□□□ 1.56
SPHK1-202ENST00000392496 HDLBPQ00341 1268 aaKnown RBP24.79■■□□□ 1.56
SPHK1-202ENST00000392496 CCDC183Q5T5S1 534 aa24.79■■□□□ 1.56
SPHK1-202ENST00000392496 RCSD1Q6JBY9 416 aa24.79■■□□□ 1.56
SPHK1-202ENST00000392496 USP17L1Q7RTZ2 530 aa24.79■■□□□ 1.56
SPHK1-202ENST00000392496 RNF26Q9BY78 433 aaPredicted RBP24.79■■□□□ 1.56
SPHK1-202ENST00000392496 GRPEL1Q9HAV7 217 aa24.79■■□□□ 1.56
SPHK1-202ENST00000392496 KCNQ5Q9NR82 932 aa24.79■■□□□ 1.56
SPHK1-202ENST00000392496 GJB4Q9NTQ9 266 aa24.79■■□□□ 1.56
SPHK1-202ENST00000392496 AOC3Q16853 763 aa24.78■■□□□ 1.56
SPHK1-202ENST00000392496 CCDC93Q567U6 631 aa24.78■■□□□ 1.56
SPHK1-202ENST00000392496 USP28Q96RU2 1077 aa24.78■■□□□ 1.56
SPHK1-202ENST00000392496 RASA1P20936 1047 aa24.77■■□□□ 1.56
SPHK1-202ENST00000392496 CDK8P49336 464 aa24.77■■□□□ 1.56
SPHK1-202ENST00000392496 SCNN1DP51172 638 aa24.77■■□□□ 1.56
SPHK1-202ENST00000392496 LRSAM1Q6UWE0 723 aa24.77■■□□□ 1.56
SPHK1-202ENST00000392496 RTKN2Q8IZC4 609 aa24.77■■□□□ 1.56
SPHK1-202ENST00000392496 GOLGA6L4A6NEF3 574 aa24.77■■□□□ 1.56
SPHK1-202ENST00000392496 TSPY3P0CV98 308 aa24.77■■□□□ 1.56
SPHK1-202ENST00000392496 TSPY8P0CW00 308 aa24.77■■□□□ 1.56
SPHK1-202ENST00000392496 KCNA3P22001 575 aa24.77■■□□□ 1.56
SPHK1-202ENST00000392496 CRKP46108 304 aa24.77■■□□□ 1.56
SPHK1-202ENST00000392496 IL17RBQ9NRM6 502 aa24.77■■□□□ 1.56
SPHK1-202ENST00000392496 USP40Q9NVE5 1235 aa24.77■■□□□ 1.56
SPHK1-202ENST00000392496 ADAMTSL1Q8N6G6 1762 aa24.76■■□□□ 1.55
SPHK1-202ENST00000392496 SYCE3A1L190 88 aa24.76■■□□□ 1.55
SPHK1-202ENST00000392496 WDHD1O75717 1129 aaPredicted RBP24.76■■□□□ 1.55
SPHK1-202ENST00000392496 LETM1O95202 739 aaPredicted RBP24.76■■□□□ 1.55
SPHK1-202ENST00000392496 DPEP1P16444 411 aa24.76■■□□□ 1.55
SPHK1-202ENST00000392496 APOBEC3HQ6NTF7 200 aaKnown RBP24.76■■□□□ 1.55
SPHK1-202ENST00000392496 SLC44A5Q8NCS7 719 aa24.76■■□□□ 1.55
SPHK1-202ENST00000392496 ZDHHC15Q96MV8 337 aa24.76■■□□□ 1.55
SPHK1-202ENST00000392496 MAP3K14Q99558 947 aa24.76■■□□□ 1.55
SPHK1-202ENST00000392496 RTEL1Q9NZ71 1219 aa24.76■■□□□ 1.55
SPHK1-202ENST00000392496 MYH6P13533 1939 aa24.76■■□□□ 1.55
SPHK1-202ENST00000392496 KIF28PB7ZC32 967 aa24.75■■□□□ 1.55
SPHK1-202ENST00000392496 PPIP5K2O43314 1243 aa24.75■■□□□ 1.55
SPHK1-202ENST00000392496 XRCC6P12956 609 aaKnown RBP eCLIP24.75■■□□□ 1.55
SPHK1-202ENST00000392496 FUT2Q10981 343 aa24.75■■□□□ 1.55
SPHK1-202ENST00000392496 MYSM1Q5VVJ2 828 aa24.75■■□□□ 1.55
SPHK1-202ENST00000392496 CDC42EP5Q6NZY7 148 aa24.75■■□□□ 1.55
SPHK1-202ENST00000392496 CTCFLQ8NI51 663 aaPredicted RBP24.75■■□□□ 1.55
SPHK1-202ENST00000392496 PSMD1Q99460 953 aa24.75■■□□□ 1.55
SPHK1-202ENST00000392496 KAT14Q9H8E8 782 aa24.75■■□□□ 1.55
SPHK1-202ENST00000392496 PRPF3O43395 683 aaKnown RBP24.75■■□□□ 1.55
SPHK1-202ENST00000392496 GUCY1A2P33402 732 aa24.75■■□□□ 1.55
SPHK1-202ENST00000392496 TMTC3Q6ZXV5 915 aa24.75■■□□□ 1.55
SPHK1-202ENST00000392496 PGBD1Q96JS3 809 aa24.75■■□□□ 1.55
SPHK1-202ENST00000392496 AKAP17AQ02040 695 aaKnown RBP24.74■■□□□ 1.55
SPHK1-202ENST00000392496 CMTR1Q8N1G2 835 aaKnown RBP24.74■■□□□ 1.55
SPHK1-202ENST00000392496 PSME4Q14997 1843 aa24.74■■□□□ 1.55
SPHK1-202ENST00000392496 UBE2Q2LH0YL09 131 aa24.73■■□□□ 1.55
SPHK1-202ENST00000392496 U2AF2P26368 475 aaKnown RBP eCLIP24.73■■□□□ 1.55
SPHK1-202ENST00000392496 CEBPZQ03701 1054 aaKnown RBP24.73■■□□□ 1.55
SPHK1-202ENST00000392496 PICALMQ13492 652 aa24.73■■□□□ 1.55
SPHK1-202ENST00000392496 TPRNQ4KMQ1 711 aa24.73■■□□□ 1.55
SPHK1-202ENST00000392496 CCDC82Q8N4S0 544 aa24.73■■□□□ 1.55
Retrieved 100 of 20,778 RNA–protein pairs in 54.1 ms