RNA–Protein interactions for RNA: ENST00000392246.6

SUMO1-203, Transcript of small ubiquitin-like modifier 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SUMO1, Length 1,536 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUMO1-203ENST00000392246 RBM8AQ9Y5S9 174 aaKnown RBP17.72■□□□□ 0.43
SUMO1-203ENST00000392246 GDF11O95390 407 aa17.71■□□□□ 0.43
SUMO1-203ENST00000392246 ASNSP08243 561 aa17.71■□□□□ 0.43
SUMO1-203ENST00000392246 ABCB5Q2M3G0 1257 aa17.71■□□□□ 0.43
SUMO1-203ENST00000392246 PAXIP1Q6ZW49 1069 aaPredicted RBP17.71■□□□□ 0.43
SUMO1-203ENST00000392246 CABP5Q9NP86 173 aa17.71■□□□□ 0.43
SUMO1-203ENST00000392246 EIF5BO60841 1220 aaKnown RBP17.7■□□□□ 0.42
SUMO1-203ENST00000392246 FGRP09769 529 aa17.7■□□□□ 0.42
SUMO1-203ENST00000392246 PCP11498 1178 aaKnown RBP17.7■□□□□ 0.42
SUMO1-203ENST00000392246 ECE1P42892 770 aa17.7■□□□□ 0.42
SUMO1-203ENST00000392246 AKNAD1Q5T1N1 836 aa17.7■□□□□ 0.42
SUMO1-203ENST00000392246 ERO1BQ86YB8 467 aa17.7■□□□□ 0.42
SUMO1-203ENST00000392246 ZNF444Q8N0Y2 327 aaPredicted RBP17.7■□□□□ 0.42
SUMO1-203ENST00000392246 RNF41Q9H4P4 317 aaPredicted RBP17.7■□□□□ 0.42
SUMO1-203ENST00000392246 SPDYE5A6NIY4 337 aa17.69■□□□□ 0.42
SUMO1-203ENST00000392246 PRDM1O75626 825 aa17.69■□□□□ 0.42
SUMO1-203ENST00000392246 GH2P01242 217 aa17.69■□□□□ 0.42
SUMO1-203ENST00000392246 PTPRAP18433 802 aa17.69■□□□□ 0.42
SUMO1-203ENST00000392246 RASA1P20936 1047 aa17.69■□□□□ 0.42
SUMO1-203ENST00000392246 PPATQ06203 517 aa17.69■□□□□ 0.42
SUMO1-203ENST00000392246 CYP4F22Q6NT55 531 aa17.69■□□□□ 0.42
SUMO1-203ENST00000392246 MFSD6Q6ZSS7 791 aa17.69■□□□□ 0.42
SUMO1-203ENST00000392246 RASAL3Q86YV0 1011 aa17.69■□□□□ 0.42
SUMO1-203ENST00000392246 STAG1Q8WVM7 1258 aa17.69■□□□□ 0.42
SUMO1-203ENST00000392246 OPTNQ96CV9 577 aa17.69■□□□□ 0.42
SUMO1-203ENST00000392246 NBPF3Q9H094 633 aa17.69■□□□□ 0.42
SUMO1-203ENST00000392246 ZBTB21Q9ULJ3 1066 aa17.69■□□□□ 0.42
SUMO1-203ENST00000392246 DDX52Q9Y2R4 599 aaKnown RBP eCLIP17.69■□□□□ 0.42
SUMO1-203ENST00000392246 MPHOSPH10O00566 681 aaKnown RBP17.68■□□□□ 0.42
SUMO1-203ENST00000392246 EPB41L2O43491 1005 aaKnown RBP17.68■□□□□ 0.42
SUMO1-203ENST00000392246 ORC4O43929 436 aa17.68■□□□□ 0.42
SUMO1-203ENST00000392246 CYP21A2P08686 494 aa17.68■□□□□ 0.42
SUMO1-203ENST00000392246 SLC10A3P09131 477 aa17.68■□□□□ 0.42
SUMO1-203ENST00000392246 JAG1P78504 1218 aa17.68■□□□□ 0.42
SUMO1-203ENST00000392246 TBC1D10CQ8IV04 446 aa17.68■□□□□ 0.42
SUMO1-203ENST00000392246 WNK4Q96J92 1243 aa17.68■□□□□ 0.42
SUMO1-203ENST00000392246 CAPNS2Q96L46 248 aa17.68■□□□□ 0.42
SUMO1-203ENST00000392246 INCENPQ9NQS7 918 aa17.68■□□□□ 0.42
SUMO1-203ENST00000392246 USP17L5A8MUK1 530 aa17.67■□□□□ 0.42
SUMO1-203ENST00000392246 FAM155AB1AL88 458 aaPredicted RBP17.67■□□□□ 0.42
SUMO1-203ENST00000392246 ZBTB48P10074 688 aaPredicted RBP17.67■□□□□ 0.42
SUMO1-203ENST00000392246 AKR1B1P15121 316 aa17.67■□□□□ 0.42
SUMO1-203ENST00000392246 NECTIN1Q15223 517 aa17.67■□□□□ 0.42
SUMO1-203ENST00000392246 SHROOM1Q2M3G4 852 aaPredicted RBP17.67■□□□□ 0.42
SUMO1-203ENST00000392246 SPRYD7Q5W111 196 aa17.67■□□□□ 0.42
SUMO1-203ENST00000392246 TMEM179Q6ZVK1 233 aa17.67■□□□□ 0.42
SUMO1-203ENST00000392246 CNKSR2Q8WXI2 1034 aa17.67■□□□□ 0.42
SUMO1-203ENST00000392246 OTUD5Q96G74 571 aa17.67■□□□□ 0.42
SUMO1-203ENST00000392246 TBC1D2Q9BYX2 928 aa17.67■□□□□ 0.42
SUMO1-203ENST00000392246 TOMM22Q9NS69 142 aa17.67■□□□□ 0.42
SUMO1-203ENST00000392246 TACC3Q9Y6A5 838 aa17.67■□□□□ 0.42
SUMO1-203ENST00000392246 ZHX2Q9Y6X8 837 aa17.67■□□□□ 0.42
SUMO1-203ENST00000392246 GRM1Q13255 1194 aa17.67■□□□□ 0.42
SUMO1-203ENST00000392246 PPIL2Q13356 520 aa17.67■□□□□ 0.42
SUMO1-203ENST00000392246 RAB3GAP1Q15042 981 aa17.67■□□□□ 0.42
SUMO1-203ENST00000392246 RNF20Q5VTR2 975 aa17.67■□□□□ 0.42
SUMO1-203ENST00000392246 AS3MTQ9HBK9 375 aa17.67■□□□□ 0.42
SUMO1-203ENST00000392246 FRMD4AQ9P2Q2 1039 aaPredicted RBP17.67■□□□□ 0.42
SUMO1-203ENST00000392246 PHIPQ8WWQ0 1821 aa17.66■□□□□ 0.42
SUMO1-203ENST00000392246 WDR33Q9C0J8 1336 aaKnown RBP17.66■□□□□ 0.42
SUMO1-203ENST00000392246 RANBP6O60518 1105 aaKnown RBP17.66■□□□□ 0.42
SUMO1-203ENST00000392246 TSPY3P0CV98 308 aa17.66■□□□□ 0.42
SUMO1-203ENST00000392246 TSPY8P0CW00 308 aa17.66■□□□□ 0.42
SUMO1-203ENST00000392246 GUCY1A2P33402 732 aa17.66■□□□□ 0.42
SUMO1-203ENST00000392246 GJA5P36382 358 aa17.66■□□□□ 0.42
SUMO1-203ENST00000392246 VEGFBP49765 207 aa17.66■□□□□ 0.42
SUMO1-203ENST00000392246 NT5C2P49902 561 aa17.66■□□□□ 0.42
SUMO1-203ENST00000392246 NOGQ13253 232 aa17.66■□□□□ 0.42
SUMO1-203ENST00000392246 C8orf34Q49A92 452 aa17.66■□□□□ 0.42
SUMO1-203ENST00000392246 RRP12Q5JTH9 1297 aaKnown RBP17.66■□□□□ 0.42
SUMO1-203ENST00000392246 CREB3L3Q68CJ9 461 aa17.66■□□□□ 0.42
SUMO1-203ENST00000392246 TSPY2A6NKD2 308 aa17.65■□□□□ 0.42
SUMO1-203ENST00000392246 IRF6O14896 467 aa17.65■□□□□ 0.42
SUMO1-203ENST00000392246 SLC27A2O14975 620 aa17.65■□□□□ 0.42
SUMO1-203ENST00000392246 TFAP4Q01664 338 aa17.65■□□□□ 0.42
SUMO1-203ENST00000392246 MKRN3Q13064 507 aaKnown RBP17.65■□□□□ 0.42
SUMO1-203ENST00000392246 SEPT2Q15019 361 aa17.65■□□□□ 0.42
SUMO1-203ENST00000392246 NEDD1Q8NHV4 660 aa17.65■□□□□ 0.42
SUMO1-203ENST00000392246 KRT23Q9C075 422 aa17.65■□□□□ 0.42
SUMO1-203ENST00000392246 CNNM2Q9H8M5 875 aa17.65■□□□□ 0.42
SUMO1-203ENST00000392246 AFG3L2Q9Y4W6 797 aa17.65■□□□□ 0.42
SUMO1-203ENST00000392246 TRDNQ13061 729 aa17.64■□□□□ 0.41
SUMO1-203ENST00000392246 FAM47AQ5JRC9 791 aa17.64■□□□□ 0.41
SUMO1-203ENST00000392246 CCDC84Q86UT8 332 aaPredicted RBP17.64■□□□□ 0.41
SUMO1-203ENST00000392246 ZNF280CQ8ND82 737 aa17.64■□□□□ 0.41
SUMO1-203ENST00000392246 ESR2Q92731 530 aa17.64■□□□□ 0.41
SUMO1-203ENST00000392246 WDR18Q9BV38 432 aa17.64■□□□□ 0.41
SUMO1-203ENST00000392246 USP26Q9BXU7 913 aa17.64■□□□□ 0.41
SUMO1-203ENST00000392246 KANSL2Q9H9L4 492 aa17.64■□□□□ 0.41
SUMO1-203ENST00000392246 GREB1LQ9C091 1923 aaPredicted RBP17.64■□□□□ 0.41
SUMO1-203ENST00000392246 NEDD4P46934 1319 aa17.64■□□□□ 0.41
SUMO1-203ENST00000392246 E7EWF7 191 aa17.63■□□□□ 0.41
SUMO1-203ENST00000392246 CXCL11O14625 94 aa17.63■□□□□ 0.41
SUMO1-203ENST00000392246 HSPA4P34932 840 aa17.63■□□□□ 0.41
SUMO1-203ENST00000392246 SPP2Q13103 211 aa17.63■□□□□ 0.41
SUMO1-203ENST00000392246 GNL3Q9BVP2 549 aaKnown RBP eCLIP17.63■□□□□ 0.41
SUMO1-203ENST00000392246 KCNH4Q9UQ05 1017 aa17.63■□□□□ 0.41
SUMO1-203ENST00000392246 PLIN4Q96Q06 1357 aa17.63■□□□□ 0.41
SUMO1-203ENST00000392246 ZKSCAN1P17029 563 aaPredicted RBP17.62■□□□□ 0.41
SUMO1-203ENST00000392246 MAP2K2P36507 400 aa17.62■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms