RNA–Protein interactions for RNA: ENST00000392000.4

LRRFIP1-204, Transcript of LRR binding FLII interacting protein 1, humanhuman

TSL 1 (best) BASIC

Gene LRRFIP1, Length 3,365 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRFIP1-204ENST00000392000 PDE4CQ08493 712 aa16.54■□□□□ 0.24
LRRFIP1-204ENST00000392000 GPR108Q9NPR9 543 aa16.54■□□□□ 0.24
LRRFIP1-204ENST00000392000 CTNND2Q9UQB3 1225 aa16.54■□□□□ 0.24
LRRFIP1-204ENST00000392000 SRCAPQ6ZRS2 3230 aa16.54■□□□□ 0.24
LRRFIP1-204ENST00000392000 SRGAP2O75044 1071 aa16.54■□□□□ 0.24
LRRFIP1-204ENST00000392000 TPM1P09493 284 aa16.54■□□□□ 0.24
LRRFIP1-204ENST00000392000 SMIM5Q71RC9 77 aa16.54■□□□□ 0.24
LRRFIP1-204ENST00000392000 DHX37Q8IY37 1157 aaKnown RBP16.54■□□□□ 0.24
LRRFIP1-204ENST00000392000 GOLGA6L1Q8N7Z2 621 aa16.54■□□□□ 0.24
LRRFIP1-204ENST00000392000 PIGBQ92521 554 aa16.54■□□□□ 0.24
LRRFIP1-204ENST00000392000 LRP2BPQ9P2M1 347 aa16.54■□□□□ 0.24
LRRFIP1-204ENST00000392000 FEZ2Q9UHY8 353 aaPredicted RBP16.54■□□□□ 0.24
LRRFIP1-204ENST00000392000 ZBTB1Q9Y2K1 713 aa16.54■□□□□ 0.24
LRRFIP1-204ENST00000392000 SLC4A4Q9Y6R1 1079 aa16.54■□□□□ 0.24
LRRFIP1-204ENST00000392000 IL2RBP14784 551 aa16.53■□□□□ 0.24
LRRFIP1-204ENST00000392000 NOM1Q5C9Z4 860 aaKnown RBP16.53■□□□□ 0.24
LRRFIP1-204ENST00000392000 TTC19Q6DKK2 380 aaPredicted RBP16.53■□□□□ 0.24
LRRFIP1-204ENST00000392000 NUTM2AQ8IVF1 878 aaPredicted RBP16.53■□□□□ 0.24
LRRFIP1-204ENST00000392000 NOSTRINQ8IVI9 506 aa16.53■□□□□ 0.24
LRRFIP1-204ENST00000392000 CAGE1Q8TC20 777 aa16.53■□□□□ 0.24
LRRFIP1-204ENST00000392000 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP16.53■□□□□ 0.248e-8■■■■□ 21.6
LRRFIP1-204ENST00000392000 MRFAP1Q9Y605 127 aa16.53■□□□□ 0.24
LRRFIP1-204ENST00000392000 ZMYM6O95789 1325 aa16.53■□□□□ 0.24
LRRFIP1-204ENST00000392000 MYO1CO00159 1063 aa16.53■□□□□ 0.24
LRRFIP1-204ENST00000392000 FILIP1LQ4L180 1135 aa16.53■□□□□ 0.24
LRRFIP1-204ENST00000392000 TEX13AQ9BXU3 409 aaPredicted RBP16.53■□□□□ 0.24
LRRFIP1-204ENST00000392000 FUT8Q9BYC5 575 aa16.53■□□□□ 0.24
LRRFIP1-204ENST00000392000 HDAC6Q9UBN7 1215 aa16.53■□□□□ 0.24
LRRFIP1-204ENST00000392000 C5P01031 1676 aa16.53■□□□□ 0.24
LRRFIP1-204ENST00000392000 TULP1O00294 542 aaPredicted RBP16.52■□□□□ 0.24
LRRFIP1-204ENST00000392000 CUTAO60888 179 aa16.52■□□□□ 0.24
LRRFIP1-204ENST00000392000 MAP3K9P80192 1104 aa16.52■□□□□ 0.24
LRRFIP1-204ENST00000392000 PTPAQ15257 358 aa16.52■□□□□ 0.24
LRRFIP1-204ENST00000392000 RTN1Q16799 776 aa16.52■□□□□ 0.24
LRRFIP1-204ENST00000392000 RRAGBQ5VZM2 374 aa16.52■□□□□ 0.24
LRRFIP1-204ENST00000392000 MFSD6Q6ZSS7 791 aa16.52■□□□□ 0.24
LRRFIP1-204ENST00000392000 IFNL3Q8IZI9 196 aa16.52■□□□□ 0.24
LRRFIP1-204ENST00000392000 TXLNAP40222 546 aa16.52■□□□□ 0.24
LRRFIP1-204ENST00000392000 ISCA1Q9BUE6 129 aa16.52■□□□□ 0.24
LRRFIP1-204ENST00000392000 EPB41L4AQ9HCS5 686 aaPredicted RBP16.52■□□□□ 0.24
LRRFIP1-204ENST00000392000 TUBE1Q9UJT0 475 aa16.52■□□□□ 0.24
LRRFIP1-204ENST00000392000 RIPOR2Q9Y4F9 1068 aa16.52■□□□□ 0.24
LRRFIP1-204ENST00000392000 FAM170AA1A519 330 aa16.52■□□□□ 0.23
LRRFIP1-204ENST00000392000 CIAO1O76071 339 aa16.52■□□□□ 0.23
LRRFIP1-204ENST00000392000 RESP18Q5W5W9 173 aa16.52■□□□□ 0.23
LRRFIP1-204ENST00000392000 LCORLQ8N3X6 602 aa16.52■□□□□ 0.23
LRRFIP1-204ENST00000392000 CCDC24Q8N4L8 307 aa16.52■□□□□ 0.23
LRRFIP1-204ENST00000392000 RASSF4Q9H2L5 321 aa16.52■□□□□ 0.23
LRRFIP1-204ENST00000392000 LY9Q9HBG7 655 aa16.52■□□□□ 0.23
LRRFIP1-204ENST00000392000 FAM217BQ9NTX9 383 aaPredicted RBP16.52■□□□□ 0.23
LRRFIP1-204ENST00000392000 LMO7Q8WWI1 1683 aa16.51■□□□□ 0.23
LRRFIP1-204ENST00000392000 CTAGE9A4FU28 777 aa16.51■□□□□ 0.23
LRRFIP1-204ENST00000392000 STX10O60499 249 aa16.51■□□□□ 0.23
LRRFIP1-204ENST00000392000 VSNL1P62760 191 aa16.51■□□□□ 0.23
LRRFIP1-204ENST00000392000 IGDCC4Q8TDY8 1250 aa16.51■□□□□ 0.23
LRRFIP1-204ENST00000392000 UBAC1Q9BSL1 405 aa16.51■□□□□ 0.23
LRRFIP1-204ENST00000392000 CWC15Q9P013 229 aaKnown RBP16.51■□□□□ 0.23
LRRFIP1-204ENST00000392000 PCDH11XQ9BZA7 1347 aa16.51■□□□□ 0.23
LRRFIP1-204ENST00000392000 PCDH11YQ9BZA8 1340 aa16.51■□□□□ 0.23
LRRFIP1-204ENST00000392000 CTAGE15A4D2H0 777 aa16.51■□□□□ 0.23
LRRFIP1-204ENST00000392000 CTAGE8P0CG41 777 aa16.51■□□□□ 0.23
LRRFIP1-204ENST00000392000 WTAPQ15007 396 aa16.51■□□□□ 0.23
LRRFIP1-204ENST00000392000 CTAGE6Q86UF2 777 aa16.51■□□□□ 0.23
LRRFIP1-204ENST00000392000 CTAGE4Q8IX94 777 aa16.51■□□□□ 0.23
LRRFIP1-204ENST00000392000 ZBTB38Q8NAP3 1195 aaPredicted RBP16.51■□□□□ 0.23
LRRFIP1-204ENST00000392000 NOA1Q8NC60 698 aaKnown RBP16.51■□□□□ 0.23
LRRFIP1-204ENST00000392000 STRBPQ96SI9 672 aaKnown RBP16.51■□□□□ 0.23
LRRFIP1-204ENST00000392000 TOB1P50616 345 aaPredicted RBP16.51■□□□□ 0.23
LRRFIP1-204ENST00000392000 RASGRF1Q13972 1273 aa16.51■□□□□ 0.23
LRRFIP1-204ENST00000392000 KCTD19Q17RG1 926 aaPredicted RBP16.51■□□□□ 0.23
LRRFIP1-204ENST00000392000 NLRP10Q86W26 655 aa16.51■□□□□ 0.23
LRRFIP1-204ENST00000392000 BPIFA3Q9BQP9 254 aa16.51■□□□□ 0.23
LRRFIP1-204ENST00000392000 FXR1P51114 621 aaKnown RBP eCLIP16.5■□□□□ 0.23
LRRFIP1-204ENST00000392000 EVX2Q03828 476 aa16.5■□□□□ 0.23
LRRFIP1-204ENST00000392000 TMEM139Q8IV31 216 aa16.5■□□□□ 0.23
LRRFIP1-204ENST00000392000 PDE8BO95263 885 aa16.5■□□□□ 0.23
LRRFIP1-204ENST00000392000 STARD3NLO95772 234 aa16.5■□□□□ 0.23
LRRFIP1-204ENST00000392000 KCNQ4P56696 695 aa16.5■□□□□ 0.23
LRRFIP1-204ENST00000392000 ACSBG1Q96GR2 724 aa16.5■□□□□ 0.23
LRRFIP1-204ENST00000392000 ERLIN1O75477 346 aa16.49■□□□□ 0.23
LRRFIP1-204ENST00000392000 KRT9P35527 623 aa16.49■□□□□ 0.23
LRRFIP1-204ENST00000392000 CTSWP56202 376 aa16.49■□□□□ 0.23
LRRFIP1-204ENST00000392000 BICDL1Q6ZP65 573 aa16.49■□□□□ 0.23
LRRFIP1-204ENST00000392000 RABGGTAQ92696 567 aa16.49■□□□□ 0.23
LRRFIP1-204ENST00000392000 MAP3K14Q99558 947 aa16.49■□□□□ 0.23
LRRFIP1-204ENST00000392000 V9GY48 417 aaPredicted RBP16.49■□□□□ 0.23
LRRFIP1-204ENST00000392000 PCCAP05165 728 aaPredicted RBP16.49■□□□□ 0.23
LRRFIP1-204ENST00000392000 CD44P16070 742 aaKnown RBP16.49■□□□□ 0.23
LRRFIP1-204ENST00000392000 SPATA5Q8NB90 893 aa16.49■□□□□ 0.23
LRRFIP1-204ENST00000392000 DACH1Q9UI36 760 aa16.49■□□□□ 0.23
LRRFIP1-204ENST00000392000 SYNRGQ9UMZ2 1314 aa16.49■□□□□ 0.23
LRRFIP1-204ENST00000392000 MCM7P33993 719 aa16.49■□□□□ 0.23
LRRFIP1-204ENST00000392000 SART3Q15020 963 aaKnown RBP16.49■□□□□ 0.23
LRRFIP1-204ENST00000392000 SRGAP1Q7Z6B7 1085 aa16.49■□□□□ 0.23
LRRFIP1-204ENST00000392000 RRP15Q9Y3B9 282 aaKnown RBP16.49■□□□□ 0.23
LRRFIP1-204ENST00000392000 ADGRG1Q9Y653 693 aa16.49■□□□□ 0.23
LRRFIP1-204ENST00000392000 NTRK3Q16288 839 aa16.48■□□□□ 0.23
LRRFIP1-204ENST00000392000 EARS2Q5JPH6 523 aaKnown RBP16.48■□□□□ 0.23
LRRFIP1-204ENST00000392000 MED15Q96RN5 788 aa16.48■□□□□ 0.23
LRRFIP1-204ENST00000392000 MACROD2A1Z1Q3 448 aa16.48■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms