RNA–Protein interactions for RNA: ENST00000391081.1

SNORA48.3-201, Transcript of small nucleolar RNA, H/ACA box 48, humanhuman

BASIC

Gene SNORA48, Length 134 nt, Biotype snoRNA, Subcellular localisation Exosome, Nucleolus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORA48.3-201ENST00000391081 PABPC4Q13310 644 aaKnown RBP eCLIP2.53□□□□□ -2
SNORA48.3-201ENST00000391081 SCARF1Q14162 830 aa2.53□□□□□ -2
SNORA48.3-201ENST00000391081 WTAPQ15007 396 aa2.53□□□□□ -2
SNORA48.3-201ENST00000391081 R3HDM1Q15032 1099 aaKnown RBP2.53□□□□□ -2
SNORA48.3-201ENST00000391081 RAB3GAP1Q15042 981 aa2.53□□□□□ -2
SNORA48.3-201ENST00000391081 SAFBQ15424 915 aaKnown RBP eCLIP2.53□□□□□ -2
SNORA48.3-201ENST00000391081 SEC23AQ15436 765 aa2.53□□□□□ -2
SNORA48.3-201ENST00000391081 RILPL1Q5EBL4 403 aa2.53□□□□□ -2
SNORA48.3-201ENST00000391081 NOL9Q5SY16 702 aaKnown RBP2.53□□□□□ -2
SNORA48.3-201ENST00000391081 IFIT1BQ5T764 474 aaKnown RBP2.53□□□□□ -2
SNORA48.3-201ENST00000391081 ARL6IP4Q66PJ3 421 aaKnown RBP2.53□□□□□ -2
SNORA48.3-201ENST00000391081 MOXD1Q6UVY6 613 aa2.53□□□□□ -2
SNORA48.3-201ENST00000391081 BTNL9Q6UXG8 535 aa2.53□□□□□ -2
SNORA48.3-201ENST00000391081 LBX2Q6XYB7 198 aa2.53□□□□□ -2
SNORA48.3-201ENST00000391081 PPP4R3CPQ6ZMV5 832 aa2.53□□□□□ -2
SNORA48.3-201ENST00000391081 CDC37L1Q7L3B6 337 aa2.53□□□□□ -2
SNORA48.3-201ENST00000391081 CATIPQ7Z7H3 387 aa2.53□□□□□ -2
SNORA48.3-201ENST00000391081 ZNF589Q86UQ0 364 aaPredicted RBP2.53□□□□□ -2
SNORA48.3-201ENST00000391081 FAM160B2Q86V87 743 aa2.53□□□□□ -2
SNORA48.3-201ENST00000391081 TXNRD3Q86VQ6 643 aa2.53□□□□□ -2
SNORA48.3-201ENST00000391081 TEX11Q8IYF3 940 aa2.53□□□□□ -2
SNORA48.3-201ENST00000391081 JMYQ8N9B5 988 aa2.53□□□□□ -2
SNORA48.3-201ENST00000391081 FANCBQ8NB91 859 aa2.53□□□□□ -2
SNORA48.3-201ENST00000391081 TMEM87AQ8NBN3 555 aa2.53□□□□□ -2
SNORA48.3-201ENST00000391081 DAGLBQ8NCG7 672 aa2.53□□□□□ -2
SNORA48.3-201ENST00000391081 GMCL1P1Q8NEA9 526 aa2.53□□□□□ -2
SNORA48.3-201ENST00000391081 FBXO18Q8NFZ0 1043 aa2.53□□□□□ -2
SNORA48.3-201ENST00000391081 HELBQ8NG08 1087 aaPredicted RBP2.53□□□□□ -2
SNORA48.3-201ENST00000391081 CTCFLQ8NI51 663 aaPredicted RBP2.53□□□□□ -2
SNORA48.3-201ENST00000391081 CHURC1Q8WUH1 139 aa2.53□□□□□ -2
SNORA48.3-201ENST00000391081 GTF3C6Q969F1 213 aa2.53□□□□□ -2
SNORA48.3-201ENST00000391081 SYAP1Q96A49 352 aaPredicted RBP2.53□□□□□ -2
SNORA48.3-201ENST00000391081 GMCL1Q96IK5 515 aa2.53□□□□□ -2
SNORA48.3-201ENST00000391081 TMX3Q96JJ7 454 aa2.53□□□□□ -2
SNORA48.3-201ENST00000391081 C12orf42Q96LP6 360 aa2.53□□□□□ -2
SNORA48.3-201ENST00000391081 FAM227BQ96M60 508 aa2.53□□□□□ -2
SNORA48.3-201ENST00000391081 JAKMIP1Q96N16 626 aaKnown RBP2.53□□□□□ -2
SNORA48.3-201ENST00000391081 ZSCAN10Q96SZ4 725 aaPredicted RBP2.53□□□□□ -2
SNORA48.3-201ENST00000391081 WDR18Q9BV38 432 aa2.53□□□□□ -2
SNORA48.3-201ENST00000391081 FOXP1Q9H334 677 aaPredicted RBP2.53□□□□□ -2
SNORA48.3-201ENST00000391081 RIOX1Q9H6W3 641 aa2.53□□□□□ -2
SNORA48.3-201ENST00000391081 ANTXR1Q9H6X2 564 aa2.53□□□□□ -2
SNORA48.3-201ENST00000391081 MKNK2Q9HBH9 465 aa2.53□□□□□ -2
SNORA48.3-201ENST00000391081 ARHGEF10LQ9HCE6 1279 aa2.53□□□□□ -2
SNORA48.3-201ENST00000391081 BRMS1Q9HCU9 246 aa2.53□□□□□ -2
SNORA48.3-201ENST00000391081 MYOZ2Q9NPC6 264 aa2.53□□□□□ -2
SNORA48.3-201ENST00000391081 PIH1D3Q9NQM4 214 aaKnown RBP2.53□□□□□ -2
SNORA48.3-201ENST00000391081 EIF4ENIF1Q9NRA8 985 aaKnown RBP2.53□□□□□ -2
SNORA48.3-201ENST00000391081 ADARB2Q9NS39 739 aaKnown RBP2.53□□□□□ -2
SNORA48.3-201ENST00000391081 MCM9Q9NXL9 1143 aa2.53□□□□□ -2
SNORA48.3-201ENST00000391081 AATFQ9NY61 560 aaKnown RBP eCLIP2.53□□□□□ -2
SNORA48.3-201ENST00000391081 GPRC5DQ9NZD1 345 aa2.53□□□□□ -2
SNORA48.3-201ENST00000391081 ZSWIM5Q9P217 1185 aa2.53□□□□□ -2
SNORA48.3-201ENST00000391081 PPP1R1BQ9UD71 204 aaPredicted RBP2.53□□□□□ -2
SNORA48.3-201ENST00000391081 KCNG1Q9UIX4 513 aa2.53□□□□□ -2
SNORA48.3-201ENST00000391081 ZNF112Q9UJU3 913 aa2.53□□□□□ -2
SNORA48.3-201ENST00000391081 WWC3Q9ULE0 1092 aa2.53□□□□□ -2
SNORA48.3-201ENST00000391081 CEP131Q9UPN4 1083 aa2.53□□□□□ -2
SNORA48.3-201ENST00000391081 IQSEC3Q9UPP2 1182 aaPredicted RBP2.53□□□□□ -2
SNORA48.3-201ENST00000391081 DAGLAQ9Y4D2 1042 aa2.53□□□□□ -2
SNORA48.3-201ENST00000391081 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP2.53□□□□□ -2
SNORA48.3-201ENST00000391081 LOXHD1Q8IVV2 1947 aa2.52□□□□□ -2.01
SNORA48.3-201ENST00000391081 MYH4Q9Y623 1939 aa2.52□□□□□ -2.01
SNORA48.3-201ENST00000391081 IGKV6D-41A0A0C4DH26 115 aa2.52□□□□□ -2.01
SNORA48.3-201ENST00000391081 A0A0G2JLW4 131 aa2.52□□□□□ -2.01
SNORA48.3-201ENST00000391081 PALM3A6NDB9 673 aaPredicted RBP2.52□□□□□ -2.01
SNORA48.3-201ENST00000391081 M0R2C6 588 aa2.52□□□□□ -2.01
SNORA48.3-201ENST00000391081 PIK3CDO00329 1044 aa2.52□□□□□ -2.01
SNORA48.3-201ENST00000391081 PSMD14O00487 310 aa2.52□□□□□ -2.01
SNORA48.3-201ENST00000391081 WNT10BO00744 389 aa2.52□□□□□ -2.01
SNORA48.3-201ENST00000391081 CXCL11O14625 94 aa2.52□□□□□ -2.01
SNORA48.3-201ENST00000391081 IFIT3O14879 490 aaKnown RBP2.52□□□□□ -2.01
SNORA48.3-201ENST00000391081 ATP2A1O14983 1001 aa2.52□□□□□ -2.01
SNORA48.3-201ENST00000391081 TBX3O15119 743 aa2.52□□□□□ -2.01
SNORA48.3-201ENST00000391081 WDR46O15213 610 aaKnown RBP2.52□□□□□ -2.01
SNORA48.3-201ENST00000391081 FOXP2O15409 715 aa2.52□□□□□ -2.01
SNORA48.3-201ENST00000391081 ZBTB43O43298 467 aa2.52□□□□□ -2.01
SNORA48.3-201ENST00000391081 PRC1O43663 620 aa2.52□□□□□ -2.01
SNORA48.3-201ENST00000391081 STX6O43752 255 aa2.52□□□□□ -2.01
SNORA48.3-201ENST00000391081 PPP6R2O75170 966 aa2.52□□□□□ -2.01
SNORA48.3-201ENST00000391081 SEC24BO95487 1268 aa2.52□□□□□ -2.01
SNORA48.3-201ENST00000391081 YEATS4O95619 227 aa2.52□□□□□ -2.01
SNORA48.3-201ENST00000391081 NCLP19338 710 aaKnown RBP2.52□□□□□ -2.01
SNORA48.3-201ENST00000391081 U2AF2P26368 475 aaKnown RBP eCLIP2.52□□□□□ -2.01
SNORA48.3-201ENST00000391081 PDIA3P30101 505 aaKnown RBP2.52□□□□□ -2.01
SNORA48.3-201ENST00000391081 ABCD1P33897 745 aa2.52□□□□□ -2.01
SNORA48.3-201ENST00000391081 PRPHP41219 470 aa2.52□□□□□ -2.01
SNORA48.3-201ENST00000391081 IREB2P48200 963 aaKnown RBP2.52□□□□□ -2.01
SNORA48.3-201ENST00000391081 CDK8P49336 464 aa2.52□□□□□ -2.01
SNORA48.3-201ENST00000391081 METAP2P50579 478 aaKnown RBP eCLIP2.52□□□□□ -2.01
SNORA48.3-201ENST00000391081 AK2P54819 239 aa2.52□□□□□ -2.01
SNORA48.3-201ENST00000391081 PPATQ06203 517 aa2.52□□□□□ -2.01
SNORA48.3-201ENST00000391081 SSRP1Q08945 709 aaKnown RBP2.52□□□□□ -2.01
SNORA48.3-201ENST00000391081 AP3B2Q13367 1082 aa2.52□□□□□ -2.01
SNORA48.3-201ENST00000391081 TOB2Q14106 344 aaPredicted RBP2.52□□□□□ -2.01
SNORA48.3-201ENST00000391081 TRIM29Q14134 588 aa2.52□□□□□ -2.01
SNORA48.3-201ENST00000391081 DHX8Q14562 1220 aaKnown RBP2.52□□□□□ -2.01
SNORA48.3-201ENST00000391081 NTRK3Q16288 839 aa2.52□□□□□ -2.01
SNORA48.3-201ENST00000391081 CCDC96Q2M329 555 aa2.52□□□□□ -2.01
SNORA48.3-201ENST00000391081 TKFCQ3LXA3 575 aa2.52□□□□□ -2.01
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms