RNA–Protein interactions for RNA: ENST00000390993.1

SNORD28B-201, Transcript of small nucleolar RNA, C/D box 28B, humanhuman

BASIC

Gene SNORD28B, Length 75 nt, Biotype snoRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORD28B-201ENST00000390993 CST3P01034 146 aaPredicted RBP2.37□□□□□ -2.03
SNORD28B-201ENST00000390993 PGRP06401 933 aa2.37□□□□□ -2.03
SNORD28B-201ENST00000390993 GRK4P32298 578 aa2.37□□□□□ -2.03
SNORD28B-201ENST00000390993 TNNI2P48788 182 aa2.37□□□□□ -2.03
SNORD28B-201ENST00000390993 ST13P50502 369 aaKnown RBP2.37□□□□□ -2.03
SNORD28B-201ENST00000390993 TAF1CQ15572 869 aaPredicted RBP2.37□□□□□ -2.03
SNORD28B-201ENST00000390993 LCE3BQ5TA77 95 aa2.37□□□□□ -2.03
SNORD28B-201ENST00000390993 SLC6A19Q695T7 634 aa2.37□□□□□ -2.03
SNORD28B-201ENST00000390993 LRFN4Q6PJG9 635 aa2.37□□□□□ -2.03
SNORD28B-201ENST00000390993 AGMOQ6ZNB7 445 aa2.37□□□□□ -2.03
SNORD28B-201ENST00000390993 C22orf34Q6ZV56 151 aa2.37□□□□□ -2.03
SNORD28B-201ENST00000390993 TMPRSS7Q7RTY8 843 aa2.37□□□□□ -2.03
SNORD28B-201ENST00000390993 CCDC84Q86UT8 332 aaPredicted RBP2.37□□□□□ -2.03
SNORD28B-201ENST00000390993 SPACA3Q8IXA5 215 aa2.37□□□□□ -2.03
SNORD28B-201ENST00000390993 LRRN4CLQ8ND94 238 aa2.37□□□□□ -2.03
SNORD28B-201ENST00000390993 FLAD1Q8NFF5 587 aa2.37□□□□□ -2.03
SNORD28B-201ENST00000390993 PIWIL2Q8TC59 973 aaKnown RBP2.37□□□□□ -2.03
SNORD28B-201ENST00000390993 DHX38Q92620 1227 aaKnown RBP2.37□□□□□ -2.03
SNORD28B-201ENST00000390993 JARID2Q92833 1246 aaPredicted RBP2.37□□□□□ -2.03
SNORD28B-201ENST00000390993 SETDB2Q96T68 719 aa2.37□□□□□ -2.03
SNORD28B-201ENST00000390993 KRTAP9-2Q9BYQ4 174 aa2.37□□□□□ -2.03
SNORD28B-201ENST00000390993 MBNL3Q9NUK0 354 aaKnown RBP2.37□□□□□ -2.03
SNORD28B-201ENST00000390993 GPATCH2Q9NW75 528 aa2.37□□□□□ -2.03
SNORD28B-201ENST00000390993 VTI1BQ9UEU0 232 aa2.37□□□□□ -2.03
SNORD28B-201ENST00000390993 ADAM30Q9UKF2 790 aa2.37□□□□□ -2.03
SNORD28B-201ENST00000390993 PITPNM2Q9BZ72 1349 aa2.37□□□□□ -2.03
SNORD28B-201ENST00000390993 KRTAP9-6A0A140TA67 174 aa2.36□□□□□ -2.03
SNORD28B-201ENST00000390993 KRTAP9-1A8MXZ3 250 aaPredicted RBP2.36□□□□□ -2.03
SNORD28B-201ENST00000390993 H3BS24 57 aa2.36□□□□□ -2.03
SNORD28B-201ENST00000390993 SORBS3O60504 671 aa2.36□□□□□ -2.03
SNORD28B-201ENST00000390993 SLITRK5O94991 958 aa2.36□□□□□ -2.03
SNORD28B-201ENST00000390993 GLI1P08151 1106 aa2.36□□□□□ -2.03
SNORD28B-201ENST00000390993 ZNF865P0CJ78 1059 aaPredicted RBP2.36□□□□□ -2.03
SNORD28B-201ENST00000390993 LTKP29376 864 aa2.36□□□□□ -2.03
SNORD28B-201ENST00000390993 RPL6Q02878 288 aaKnown RBP2.36□□□□□ -2.03
SNORD28B-201ENST00000390993 SEPT6Q14141 434 aa2.36□□□□□ -2.03
SNORD28B-201ENST00000390993 INPP5AQ14642 412 aa2.36□□□□□ -2.03
SNORD28B-201ENST00000390993 CCDC27Q2M243 656 aa2.36□□□□□ -2.03
SNORD28B-201ENST00000390993 ZNF326Q5BKZ1 582 aaKnown RBP2.36□□□□□ -2.03
SNORD28B-201ENST00000390993 PRAMEF13Q5VWM6 474 aa2.36□□□□□ -2.03
SNORD28B-201ENST00000390993 MRPL41Q8IXM3 137 aaKnown RBP2.36□□□□□ -2.03
SNORD28B-201ENST00000390993 OXR1Q8N573 874 aa2.36□□□□□ -2.03
SNORD28B-201ENST00000390993 BHLHE22Q8NFJ8 381 aaPredicted RBP2.36□□□□□ -2.03
SNORD28B-201ENST00000390993 XAGE3Q8WTP9 111 aa2.36□□□□□ -2.03
SNORD28B-201ENST00000390993 CRELD1Q96HD1 420 aa2.36□□□□□ -2.03
SNORD28B-201ENST00000390993 KIRREL1Q96J84 757 aa2.36□□□□□ -2.03
SNORD28B-201ENST00000390993 TMEM87BQ96K49 555 aa2.36□□□□□ -2.03
SNORD28B-201ENST00000390993 HEXIM2Q96MH2 286 aaKnown RBP2.36□□□□□ -2.03
SNORD28B-201ENST00000390993 HSPA12BQ96MM6 686 aa2.36□□□□□ -2.03
SNORD28B-201ENST00000390993 ALPK1Q96QP1 1244 aa2.36□□□□□ -2.03
SNORD28B-201ENST00000390993 CARS2Q9HA77 564 aaKnown RBP2.36□□□□□ -2.03
SNORD28B-201ENST00000390993 ZSWIM5Q9P217 1185 aa2.36□□□□□ -2.03
SNORD28B-201ENST00000390993 PARP2Q9UGN5 583 aa2.36□□□□□ -2.03
SNORD28B-201ENST00000390993 PLAGL2Q9UPG8 496 aa2.36□□□□□ -2.03
SNORD28B-201ENST00000390993 DBX1A6NMT0 343 aa2.35□□□□□ -2.03
SNORD28B-201ENST00000390993 NFIBO00712 420 aa2.35□□□□□ -2.03
SNORD28B-201ENST00000390993 C8AP07357 584 aa2.35□□□□□ -2.03
SNORD28B-201ENST00000390993 PLCG1P19174 1290 aa2.35□□□□□ -2.03
SNORD28B-201ENST00000390993 GBP1P32455 592 aa2.35□□□□□ -2.03
SNORD28B-201ENST00000390993 GBP2P32456 591 aaPredicted RBP2.35□□□□□ -2.03
SNORD28B-201ENST00000390993 NTF4P34130 210 aa2.35□□□□□ -2.03
SNORD28B-201ENST00000390993 GDNFP39905 211 aa2.35□□□□□ -2.03
SNORD28B-201ENST00000390993 CD96P40200 585 aa2.35□□□□□ -2.03
SNORD28B-201ENST00000390993 RAP1GAPP47736 663 aa2.35□□□□□ -2.03
SNORD28B-201ENST00000390993 DAB2P98082 770 aa2.35□□□□□ -2.03
SNORD28B-201ENST00000390993 SLBPQ14493 270 aaKnown RBP eCLIP2.35□□□□□ -2.03
SNORD28B-201ENST00000390993 MLANAQ16655 118 aa2.35□□□□□ -2.03
SNORD28B-201ENST00000390993 NKPD1Q17RQ9 610 aa2.35□□□□□ -2.03
SNORD28B-201ENST00000390993 CLEC16AQ2KHT3 1053 aa2.35□□□□□ -2.03
SNORD28B-201ENST00000390993 SNAP47Q5SQN1 464 aa2.35□□□□□ -2.03
SNORD28B-201ENST00000390993 MPRIPQ6WCQ1 1025 aa2.35□□□□□ -2.03
SNORD28B-201ENST00000390993 NFXL1Q6ZNB6 911 aa2.35□□□□□ -2.03
SNORD28B-201ENST00000390993 TMC4Q7Z404 712 aa2.35□□□□□ -2.03
SNORD28B-201ENST00000390993 TTC6Q86TZ1 520 aa2.35□□□□□ -2.03
SNORD28B-201ENST00000390993 CDH24Q86UP0 819 aa2.35□□□□□ -2.03
SNORD28B-201ENST00000390993 KRTAP1-3Q8IUG1 177 aa2.35□□□□□ -2.03
SNORD28B-201ENST00000390993 MCATQ8IVS2 390 aaKnown RBP2.35□□□□□ -2.03
SNORD28B-201ENST00000390993 FAM13CQ8NE31 585 aa2.35□□□□□ -2.03
SNORD28B-201ENST00000390993 ZSCAN18Q8TBC5 510 aaPredicted RBP2.35□□□□□ -2.03
SNORD28B-201ENST00000390993 UBE2FQ969M7 185 aa2.35□□□□□ -2.03
SNORD28B-201ENST00000390993 GAL3ST3Q96A11 431 aa2.35□□□□□ -2.03
SNORD28B-201ENST00000390993 TOX2Q96NM4 488 aa2.35□□□□□ -2.03
SNORD28B-201ENST00000390993 KRTAP4-12Q9BQ66 201 aa2.35□□□□□ -2.03
SNORD28B-201ENST00000390993 FBRSQ9HAH7 460 aa2.35□□□□□ -2.03
SNORD28B-201ENST00000390993 ATP13A1Q9HD20 1204 aa2.35□□□□□ -2.03
SNORD28B-201ENST00000390993 SLAMF8Q9P0V8 285 aa2.35□□□□□ -2.03
SNORD28B-201ENST00000390993 DUSP13Q9UII6 198 aa2.35□□□□□ -2.03
SNORD28B-201ENST00000390993 CTNND2Q9UQB3 1225 aa2.35□□□□□ -2.03
SNORD28B-201ENST00000390993 CAPN6Q9Y6Q1 641 aa2.35□□□□□ -2.03
SNORD28B-201ENST00000390993 SSU72P8A0A1W2PR75 194 aa2.34□□□□□ -2.03
SNORD28B-201ENST00000390993 TMEM253P0C7T8 217 aa2.34□□□□□ -2.03
SNORD28B-201ENST00000390993 TPP2P29144 1249 aaPredicted RBP2.34□□□□□ -2.03
SNORD28B-201ENST00000390993 RNF4P78317 190 aa2.34□□□□□ -2.03
SNORD28B-201ENST00000390993 LMNB2Q03252 620 aa2.34□□□□□ -2.03
SNORD28B-201ENST00000390993 CHRNEQ04844 493 aa2.34□□□□□ -2.03
SNORD28B-201ENST00000390993 DUSP4Q13115 394 aa2.34□□□□□ -2.03
SNORD28B-201ENST00000390993 NKG7Q16617 165 aa2.34□□□□□ -2.03
SNORD28B-201ENST00000390993 CWF19L2Q2TBE0 894 aaKnown RBP2.34□□□□□ -2.03
SNORD28B-201ENST00000390993 KRTAP19-4Q3LI73 84 aa2.34□□□□□ -2.03
SNORD28B-201ENST00000390993 ZNF648Q5T619 568 aaPredicted RBP2.34□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 11.9 ms