RNA–Protein interactions for RNA: ENST00000390627.3

IGHV3-53-201, Transcript of immunoglobulin heavy variable 3-53, humanhuman

APPRIS P1 BASIC

Gene IGHV3-53, Length 571 nt, Biotype IG V gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IGHV3-53-201ENST00000390627 TESPA1A2RU30 521 aaPredicted RBP17.96■□□□□ 0.47
IGHV3-53-201ENST00000390627 USP17L5A8MUK1 530 aa17.96■□□□□ 0.47
IGHV3-53-201ENST00000390627 CXCL11O14625 94 aa17.96■□□□□ 0.47
IGHV3-53-201ENST00000390627 GDF11O95390 407 aa17.96■□□□□ 0.47
IGHV3-53-201ENST00000390627 ALDH1A1P00352 501 aa17.96■□□□□ 0.47
IGHV3-53-201ENST00000390627 CETPP11597 493 aa17.96■□□□□ 0.47
IGHV3-53-201ENST00000390627 SHMT1P34896 483 aa17.96■□□□□ 0.47
IGHV3-53-201ENST00000390627 CCL15Q16663 113 aa17.96■□□□□ 0.47
IGHV3-53-201ENST00000390627 OTUD7BQ6GQQ9 843 aa17.96■□□□□ 0.47
IGHV3-53-201ENST00000390627 CWC27Q6UX04 472 aaKnown RBP17.96■□□□□ 0.47
IGHV3-53-201ENST00000390627 MS4A4AQ96JQ5 239 aa17.96■□□□□ 0.47
IGHV3-53-201ENST00000390627 AS3MTQ9HBK9 375 aa17.96■□□□□ 0.47
IGHV3-53-201ENST00000390627 ZBTB21Q9ULJ3 1066 aa17.96■□□□□ 0.47
IGHV3-53-201ENST00000390627 PCNTO95613 3336 aa17.96■□□□□ 0.47
IGHV3-53-201ENST00000390627 ROBO3Q96MS0 1386 aa17.95■□□□□ 0.46
IGHV3-53-201ENST00000390627 MINDY4BA8MYZ0 360 aa17.95■□□□□ 0.46
IGHV3-53-201ENST00000390627 EVX2Q03828 476 aa17.95■□□□□ 0.46
IGHV3-53-201ENST00000390627 C16orf86Q6ZW13 317 aa17.95■□□□□ 0.46
IGHV3-53-201ENST00000390627 ZNF589Q86UQ0 364 aaPredicted RBP17.95■□□□□ 0.46
IGHV3-53-201ENST00000390627 IFNL1Q8IU54 200 aa17.95■□□□□ 0.46
IGHV3-53-201ENST00000390627 CABP5Q9NP86 173 aa17.95■□□□□ 0.46
IGHV3-53-201ENST00000390627 AFG3L2Q9Y4W6 797 aa17.95■□□□□ 0.46
IGHV3-53-201ENST00000390627 FOXN1O15353 648 aa17.94■□□□□ 0.46
IGHV3-53-201ENST00000390627 GH2P01242 217 aa17.94■□□□□ 0.46
IGHV3-53-201ENST00000390627 CTCFP49711 727 aaPredicted RBP17.94■□□□□ 0.46
IGHV3-53-201ENST00000390627 ABCB5Q2M3G0 1257 aa17.94■□□□□ 0.46
IGHV3-53-201ENST00000390627 BMP2KLQ5H9B9 411 aa17.94■□□□□ 0.46
IGHV3-53-201ENST00000390627 VPS53Q5VIR6 699 aa17.94■□□□□ 0.46
IGHV3-53-201ENST00000390627 SLC44A5Q8NCS7 719 aa17.94■□□□□ 0.46
IGHV3-53-201ENST00000390627 ZNF280CQ8ND82 737 aa17.94■□□□□ 0.46
IGHV3-53-201ENST00000390627 RUFY2Q8WXA3 655 aa17.94■□□□□ 0.46
IGHV3-53-201ENST00000390627 BRI3BPQ8WY22 251 aa17.94■□□□□ 0.46
IGHV3-53-201ENST00000390627 DYNLL2Q96FJ2 89 aa17.94■□□□□ 0.46
IGHV3-53-201ENST00000390627 ZNF287Q9HBT7 754 aa17.94■□□□□ 0.46
IGHV3-53-201ENST00000390627 RNF186Q9NXI6 227 aa17.94■□□□□ 0.46
IGHV3-53-201ENST00000390627 FRMD4AQ9P2Q2 1039 aaPredicted RBP17.94■□□□□ 0.46
IGHV3-53-201ENST00000390627 RAD50Q92878 1312 aa17.94■□□□□ 0.46
IGHV3-53-201ENST00000390627 TRPA1O75762 1119 aa17.93■□□□□ 0.46
IGHV3-53-201ENST00000390627 SLC3A2P08195 630 aaKnown RBP17.93■□□□□ 0.46
IGHV3-53-201ENST00000390627 HSPD1P10809 573 aaKnown RBP17.93■□□□□ 0.46
IGHV3-53-201ENST00000390627 CDK8P49336 464 aa17.93■□□□□ 0.46
IGHV3-53-201ENST00000390627 ALX1Q15699 326 aa17.93■□□□□ 0.46
IGHV3-53-201ENST00000390627 CCDC84Q86UT8 332 aaPredicted RBP17.93■□□□□ 0.46
IGHV3-53-201ENST00000390627 SKAP1Q86WV1 359 aa17.93■□□□□ 0.46
IGHV3-53-201ENST00000390627 CCDC17Q96LX7 622 aa17.93■□□□□ 0.46
IGHV3-53-201ENST00000390627 ZMYM6O95789 1325 aa17.93■□□□□ 0.46
IGHV3-53-201ENST00000390627 MYH8P13535 1937 aa17.92■□□□□ 0.46
IGHV3-53-201ENST00000390627 A0A0G2JLL6 359 aaPredicted RBP17.92■□□□□ 0.46
IGHV3-53-201ENST00000390627 TRIM75PA6NK02 468 aa17.92■□□□□ 0.46
IGHV3-53-201ENST00000390627 IGF2BP3O00425 579 aaKnown RBP eCLIP17.92■□□□□ 0.46
IGHV3-53-201ENST00000390627 MPHOSPH10O00566 681 aaKnown RBP17.92■□□□□ 0.46
IGHV3-53-201ENST00000390627 FOXP2O15409 715 aa17.92■□□□□ 0.46
IGHV3-53-201ENST00000390627 CHMLP26374 656 aa17.92■□□□□ 0.46
IGHV3-53-201ENST00000390627 FASTKD5Q7L8L6 764 aaKnown RBP17.92■□□□□ 0.46
IGHV3-53-201ENST00000390627 PRRT2Q7Z6L0 340 aaPredicted RBP17.92■□□□□ 0.46
IGHV3-53-201ENST00000390627 WDR18Q9BV38 432 aa17.92■□□□□ 0.46
IGHV3-53-201ENST00000390627 ZCCHC17Q9NP64 241 aaKnown RBP17.92■□□□□ 0.46
IGHV3-53-201ENST00000390627 PHIPQ8WWQ0 1821 aa17.92■□□□□ 0.46
IGHV3-53-201ENST00000390627 SMIM22K7EJ46 135 aa17.91■□□□□ 0.46
IGHV3-53-201ENST00000390627 HSPA8P11142 646 aaKnown RBP17.91■□□□□ 0.46
IGHV3-53-201ENST00000390627 JAG1P78504 1218 aa17.91■□□□□ 0.46
IGHV3-53-201ENST00000390627 PPARAQ07869 468 aa17.91■□□□□ 0.46
IGHV3-53-201ENST00000390627 SPP2Q13103 211 aa17.91■□□□□ 0.46
IGHV3-53-201ENST00000390627 RAB3GAP1Q15042 981 aa17.91■□□□□ 0.46
IGHV3-53-201ENST00000390627 SHROOM1Q2M3G4 852 aaPredicted RBP17.91■□□□□ 0.46
IGHV3-53-201ENST00000390627 TMEM179Q6ZVK1 233 aa17.91■□□□□ 0.46
IGHV3-53-201ENST00000390627 PTPN18Q99952 460 aa17.91■□□□□ 0.46
IGHV3-53-201ENST00000390627 MKNK2Q9HBH9 465 aa17.91■□□□□ 0.46
IGHV3-53-201ENST00000390627 BTBD19C9JJ37 291 aa17.9■□□□□ 0.46
IGHV3-53-201ENST00000390627 PDE4BQ07343 736 aa17.9■□□□□ 0.46
IGHV3-53-201ENST00000390627 STK11IPQ8N1F8 1099 aa17.9■□□□□ 0.46
IGHV3-53-201ENST00000390627 CFHR5Q9BXR6 569 aa17.9■□□□□ 0.46
IGHV3-53-201ENST00000390627 TSKSQ9UJT2 592 aa17.9■□□□□ 0.46
IGHV3-53-201ENST00000390627 USP17L10C9JJH3 530 aa17.89■□□□□ 0.45
IGHV3-53-201ENST00000390627 FGAP02671 866 aa17.89■□□□□ 0.45
IGHV3-53-201ENST00000390627 AKR1B1P15121 316 aa17.89■□□□□ 0.45
IGHV3-53-201ENST00000390627 GADL1Q6ZQY3 521 aa17.89■□□□□ 0.45
IGHV3-53-201ENST00000390627 ANKRD23Q86SG2 305 aa17.89■□□□□ 0.45
IGHV3-53-201ENST00000390627 DSCC1Q9BVC3 393 aa17.89■□□□□ 0.45
IGHV3-53-201ENST00000390627 PTPRFP10586 1907 aa17.89■□□□□ 0.45
IGHV3-53-201ENST00000390627 C19orf81C9J6K1 198 aa17.88■□□□□ 0.45
IGHV3-53-201ENST00000390627 LBX1P52954 281 aa17.88■□□□□ 0.45
IGHV3-53-201ENST00000390627 BACE1P56817 501 aa17.88■□□□□ 0.45
IGHV3-53-201ENST00000390627 MTMR2Q13614 643 aa17.88■□□□□ 0.45
IGHV3-53-201ENST00000390627 MOGSQ13724 837 aa17.88■□□□□ 0.45
IGHV3-53-201ENST00000390627 SEPT2Q15019 361 aa17.88■□□□□ 0.45
IGHV3-53-201ENST00000390627 TAF1CQ15572 869 aaPredicted RBP17.88■□□□□ 0.45
IGHV3-53-201ENST00000390627 SH3D19Q5HYK7 790 aa17.88■□□□□ 0.45
IGHV3-53-201ENST00000390627 FAM43AQ8N2R8 423 aa17.88■□□□□ 0.45
IGHV3-53-201ENST00000390627 PROCA1Q8NCQ7 364 aaPredicted RBP17.88■□□□□ 0.45
IGHV3-53-201ENST00000390627 FEZ1Q99689 392 aa17.88■□□□□ 0.45
IGHV3-53-201ENST00000390627 TMOD4Q9NZQ9 345 aa17.88■□□□□ 0.45
IGHV3-53-201ENST00000390627 ANAPC4Q9UJX5 808 aa17.88■□□□□ 0.45
IGHV3-53-201ENST00000390627 TBC1D8O95759 1140 aa17.87■□□□□ 0.45
IGHV3-53-201ENST00000390627 RASA1P20936 1047 aa17.87■□□□□ 0.45
IGHV3-53-201ENST00000390627 GUCY1A2P33402 732 aa17.87■□□□□ 0.45
IGHV3-53-201ENST00000390627 HMGCS2P54868 508 aa17.87■□□□□ 0.45
IGHV3-53-201ENST00000390627 ZNF444Q8N0Y2 327 aaPredicted RBP17.87■□□□□ 0.45
IGHV3-53-201ENST00000390627 ZFYVE28Q9HCC9 887 aa17.87■□□□□ 0.45
IGHV3-53-201ENST00000390627 PRDM10Q9NQV6 1147 aa17.87■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms