RNA–Protein interactions for RNA: ENST00000390462.1

TRAV35-201, Transcript of T cell receptor alpha variable 35, humanhuman

BASIC

Gene TRAV35, Length 330 nt, Biotype TR V pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV35-201ENST00000390462 RASSF10A6NK89 507 aa8.01□□□□□ -1.13
TRAV35-201ENST00000390462 GRIA4P48058 902 aa8.01□□□□□ -1.13
TRAV35-201ENST00000390462 PPM1FP49593 454 aaPredicted RBP8.01□□□□□ -1.13
TRAV35-201ENST00000390462 LRRFIP1Q32MZ4 808 aaKnown RBP8.01□□□□□ -1.13
TRAV35-201ENST00000390462 C4orf17Q53FE4 359 aa8.01□□□□□ -1.13
TRAV35-201ENST00000390462 SYDE2Q5VT97 1194 aa8.01□□□□□ -1.13
TRAV35-201ENST00000390462 SPRYD7Q5W111 196 aa8.01□□□□□ -1.13
TRAV35-201ENST00000390462 CCDC174Q6PII3 467 aa8.01□□□□□ -1.13
TRAV35-201ENST00000390462 BICDL1Q6ZP65 573 aa8.01□□□□□ -1.13
TRAV35-201ENST00000390462 CNTD1Q8N815 330 aa8.01□□□□□ -1.13
TRAV35-201ENST00000390462 NEUROD6Q96NK8 337 aa8.01□□□□□ -1.13
TRAV35-201ENST00000390462 NAP1L5Q96NT1 182 aaPredicted RBP8.01□□□□□ -1.13
TRAV35-201ENST00000390462 ELAC2Q9BQ52 826 aaKnown RBP8.01□□□□□ -1.13
TRAV35-201ENST00000390462 ANTXR1Q9H6X2 564 aa8.01□□□□□ -1.13
TRAV35-201ENST00000390462 NGRNQ9NPE2 291 aaKnown RBP8.01□□□□□ -1.13
TRAV35-201ENST00000390462 OSGEPQ9NPF4 335 aa8.01□□□□□ -1.13
TRAV35-201ENST00000390462 C11orf16Q9NQ32 467 aa8.01□□□□□ -1.13
TRAV35-201ENST00000390462 IP6K2Q9UHH9 426 aa8.01□□□□□ -1.13
TRAV35-201ENST00000390462 PHF20L1A8MW92 1017 aa8□□□□□ -1.13
TRAV35-201ENST00000390462 SLC26A4O43511 780 aa8□□□□□ -1.13
TRAV35-201ENST00000390462 TIMM44O43615 452 aa8□□□□□ -1.13
TRAV35-201ENST00000390462 NNTQ13423 1086 aa8□□□□□ -1.13
TRAV35-201ENST00000390462 SIM2Q14190 667 aaPredicted RBP8□□□□□ -1.13
TRAV35-201ENST00000390462 PCBP1Q15365 356 aaKnown RBP eCLIP8□□□□□ -1.13
TRAV35-201ENST00000390462 SPRED3Q2MJR0 410 aa8□□□□□ -1.13
TRAV35-201ENST00000390462 RPS26P11Q5JNZ5 115 aaPredicted RBP8□□□□□ -1.13
TRAV35-201ENST00000390462 RASIP1Q5U651 963 aa8□□□□□ -1.13
TRAV35-201ENST00000390462 LRRC69Q6ZNQ3 347 aa8□□□□□ -1.13
TRAV35-201ENST00000390462 ZKSCAN3Q9BRR0 538 aa8□□□□□ -1.13
TRAV35-201ENST00000390462 HERPUD2Q9BSE4 406 aa8□□□□□ -1.13
TRAV35-201ENST00000390462 GPN3Q9UHW5 284 aaPredicted RBP8□□□□□ -1.13
TRAV35-201ENST00000390462 GTF2A1LQ9UNN4 478 aa8□□□□□ -1.13
TRAV35-201ENST00000390462 CYP8B1Q9UNU6 501 aa8□□□□□ -1.13
TRAV35-201ENST00000390462 POLR3KQ9Y2Y1 108 aaPredicted RBP8□□□□□ -1.13
TRAV35-201ENST00000390462 SAMM50Q9Y512 469 aa8□□□□□ -1.13
TRAV35-201ENST00000390462 CEP164Q9UPV0 1460 aa8□□□□□ -1.13
TRAV35-201ENST00000390462 MEIS3P2A8K0S8 358 aa7.99□□□□□ -1.13
TRAV35-201ENST00000390462 FBXO21O94952 628 aa7.99□□□□□ -1.13
TRAV35-201ENST00000390462 ALDH1A1P00352 501 aa7.99□□□□□ -1.13
TRAV35-201ENST00000390462 CT47B1P0C2W7 299 aaPredicted RBP7.99□□□□□ -1.13
TRAV35-201ENST00000390462 PHKG2P15735 406 aa7.99□□□□□ -1.13
TRAV35-201ENST00000390462 POU3F2P20265 443 aaPredicted RBP7.99□□□□□ -1.13
TRAV35-201ENST00000390462 SERPINB3P29508 390 aa7.99□□□□□ -1.13
TRAV35-201ENST00000390462 HALP42357 657 aa7.99□□□□□ -1.13
TRAV35-201ENST00000390462 RASSF7Q02833 373 aa7.99□□□□□ -1.13
TRAV35-201ENST00000390462 KCTD2Q14681 263 aa7.99□□□□□ -1.13
TRAV35-201ENST00000390462 MINDY4Q4G0A6 757 aa7.99□□□□□ -1.13
TRAV35-201ENST00000390462 PKN3Q6P5Z2 889 aa7.99□□□□□ -1.13
TRAV35-201ENST00000390462 TPH2Q8IWU9 490 aa7.99□□□□□ -1.13
TRAV35-201ENST00000390462 TAB3Q8N5C8 712 aaPredicted RBP7.99□□□□□ -1.13
TRAV35-201ENST00000390462 C1orf131Q8NDD1 294 aaKnown RBP7.99□□□□□ -1.13
TRAV35-201ENST00000390462 USP33Q8TEY7 942 aa7.99□□□□□ -1.13
TRAV35-201ENST00000390462 CNTNAP3BQ96NU0 1288 aa7.99□□□□□ -1.13
TRAV35-201ENST00000390462 OSMRQ99650 979 aa7.99□□□□□ -1.13
TRAV35-201ENST00000390462 CNTNAP3Q9BZ76 1288 aa7.99□□□□□ -1.13
TRAV35-201ENST00000390462 GRIP2Q9C0E4 1043 aa7.99□□□□□ -1.13
TRAV35-201ENST00000390462 DACH1Q9UI36 760 aa7.99□□□□□ -1.13
TRAV35-201ENST00000390462 TRBV23-1A0A0A0MS06 115 aa7.98□□□□□ -1.13
TRAV35-201ENST00000390462 KLRG2A4D1S0 409 aaPredicted RBP7.98□□□□□ -1.13
TRAV35-201ENST00000390462 AGRPO00253 132 aa7.98□□□□□ -1.13
TRAV35-201ENST00000390462 GRIN3BO60391 1043 aa7.98□□□□□ -1.13
TRAV35-201ENST00000390462 DNAJC8O75937 253 aaPredicted RBP7.98□□□□□ -1.13
TRAV35-201ENST00000390462 PGRP06401 933 aa7.98□□□□□ -1.13
TRAV35-201ENST00000390462 BMP6P22004 513 aa7.98□□□□□ -1.13
TRAV35-201ENST00000390462 TMPRSS15P98073 1019 aa7.98□□□□□ -1.13
TRAV35-201ENST00000390462 TYRO3Q06418 890 aa7.98□□□□□ -1.13
TRAV35-201ENST00000390462 FAAP100Q0VG06 881 aa7.98□□□□□ -1.13
TRAV35-201ENST00000390462 COBLL1Q53SF7 1204 aa7.98□□□□□ -1.13
TRAV35-201ENST00000390462 ZNF697Q5TEC3 545 aa7.98□□□□□ -1.13
TRAV35-201ENST00000390462 KIAA1211LQ6NV74 962 aa7.98□□□□□ -1.13
TRAV35-201ENST00000390462 TOGARAM2Q6ZUX3 1019 aa7.98□□□□□ -1.13
TRAV35-201ENST00000390462 SCUBE1Q8IWY4 988 aa7.98□□□□□ -1.13
TRAV35-201ENST00000390462 CNPY4Q8N129 248 aa7.98□□□□□ -1.13
TRAV35-201ENST00000390462 CDC5LQ99459 802 aaKnown RBP7.98□□□□□ -1.13
TRAV35-201ENST00000390462 PHAXQ9H814 394 aaKnown RBP7.98□□□□□ -1.13
TRAV35-201ENST00000390462 STRN4Q9NRL3 753 aa7.98□□□□□ -1.13
TRAV35-201ENST00000390462 TMEM39AQ9NV64 488 aa7.98□□□□□ -1.13
TRAV35-201ENST00000390462 WASF2Q9Y6W5 498 aa7.98□□□□□ -1.13
TRAV35-201ENST00000390462 ARAP1Q96P48 1450 aa7.98□□□□□ -1.13
TRAV35-201ENST00000390462 LTBP3Q9NS15 1303 aa7.98□□□□□ -1.13
TRAV35-201ENST00000390462 TRAV20A0A0B4J274 112 aa7.97□□□□□ -1.13
TRAV35-201ENST00000390462 APAF1O14727 1248 aa7.97□□□□□ -1.13
TRAV35-201ENST00000390462 COPB2P35606 906 aa7.97□□□□□ -1.13
TRAV35-201ENST00000390462 CASP2P42575 452 aa7.97□□□□□ -1.13
TRAV35-201ENST00000390462 NEK4P51957 841 aa7.97□□□□□ -1.13
TRAV35-201ENST00000390462 ZNF280AP59817 542 aaPredicted RBP7.97□□□□□ -1.13
TRAV35-201ENST00000390462 POU5F1Q01860 360 aaKnown RBP7.97□□□□□ -1.13
TRAV35-201ENST00000390462 RPL6Q02878 288 aaKnown RBP7.97□□□□□ -1.13
TRAV35-201ENST00000390462 SAFBQ15424 915 aaKnown RBP eCLIP7.97□□□□□ -1.13
TRAV35-201ENST00000390462 UNC5AQ6ZN44 842 aa7.97□□□□□ -1.13
TRAV35-201ENST00000390462 ZNF598Q86UK7 904 aaKnown RBP7.97□□□□□ -1.13
TRAV35-201ENST00000390462 ZNF354CQ86Y25 554 aa7.97□□□□□ -1.13
TRAV35-201ENST00000390462 VPS37AQ8NEZ2 397 aa7.97□□□□□ -1.13
TRAV35-201ENST00000390462 OR13H1Q8NG92 308 aa7.97□□□□□ -1.13
TRAV35-201ENST00000390462 COG1Q8WTW3 980 aa7.97□□□□□ -1.13
TRAV35-201ENST00000390462 TMEM40Q8WWA1 233 aa7.97□□□□□ -1.13
TRAV35-201ENST00000390462 TTC1Q99614 292 aa7.97□□□□□ -1.13
TRAV35-201ENST00000390462 ARHGEF4Q9NR80 690 aa7.97□□□□□ -1.13
TRAV35-201ENST00000390462 PCDHB10Q9UN67 800 aa7.97□□□□□ -1.13
TRAV35-201ENST00000390462 LUC7L2Q9Y383 392 aaKnown RBP7.97□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms