RNA–Protein interactions for RNA: ENST00000390423.2

TRAV1-2-201, Transcript of T cell receptor alpha variable 1-2, humanhuman

APPRIS P1 BASIC

Gene TRAV1-2, Length 402 nt, Biotype TR V gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV1-2-201ENST00000390423 TRMT44Q8IYL2 757 aaKnown RBP7.87□□□□□ -1.15
TRAV1-2-201ENST00000390423 GPRC5AQ8NFJ5 357 aa7.87□□□□□ -1.15
TRAV1-2-201ENST00000390423 LPAR1Q92633 364 aa7.87□□□□□ -1.15
TRAV1-2-201ENST00000390423 TIFAQ96CG3 184 aa7.87□□□□□ -1.15
TRAV1-2-201ENST00000390423 IDI2Q9BXS1 227 aa7.87□□□□□ -1.15
TRAV1-2-201ENST00000390423 HCN4Q9Y3Q4 1203 aa7.87□□□□□ -1.15
TRAV1-2-201ENST00000390423 MYH2Q9UKX2 1941 aa7.86□□□□□ -1.15
TRAV1-2-201ENST00000390423 PLXNA1Q9UIW2 1896 aa7.86□□□□□ -1.15
TRAV1-2-201ENST00000390423 FAM86C2PA6NEL3 165 aa7.86□□□□□ -1.15
TRAV1-2-201ENST00000390423 MYCNP04198 464 aaPredicted RBP7.86□□□□□ -1.15
TRAV1-2-201ENST00000390423 BMP1P13497 986 aa7.86□□□□□ -1.15
TRAV1-2-201ENST00000390423 MAPK4P31152 587 aa7.86□□□□□ -1.15
TRAV1-2-201ENST00000390423 CYP2C19P33261 490 aa7.86□□□□□ -1.15
TRAV1-2-201ENST00000390423 KCNQ1P51787 676 aa7.86□□□□□ -1.15
TRAV1-2-201ENST00000390423 IRX3P78415 501 aaPredicted RBP7.86□□□□□ -1.15
TRAV1-2-201ENST00000390423 JAG1P78504 1218 aa7.86□□□□□ -1.15
TRAV1-2-201ENST00000390423 PABPC4Q13310 644 aaKnown RBP eCLIP7.86□□□□□ -1.15
TRAV1-2-201ENST00000390423 SH3D19Q5HYK7 790 aa7.86□□□□□ -1.15
TRAV1-2-201ENST00000390423 AKNAD1Q5T1N1 836 aa7.86□□□□□ -1.15
TRAV1-2-201ENST00000390423 PLEKHH3Q7Z736 793 aa7.86□□□□□ -1.15
TRAV1-2-201ENST00000390423 WDR66Q8TBY9 1149 aa7.86□□□□□ -1.15
TRAV1-2-201ENST00000390423 KHSRPQ92945 711 aaKnown RBP eCLIP7.86□□□□□ -1.15
TRAV1-2-201ENST00000390423 FERMT2Q96AC1 680 aa7.86□□□□□ -1.15
TRAV1-2-201ENST00000390423 PAGR1Q9BTK6 254 aa7.86□□□□□ -1.15
TRAV1-2-201ENST00000390423 C11orf16Q9NQ32 467 aa7.86□□□□□ -1.15
TRAV1-2-201ENST00000390423 ARIH1Q9Y4X5 557 aaPredicted RBP7.86□□□□□ -1.15
TRAV1-2-201ENST00000390423 PIEZO1Q92508 2521 aa7.86□□□□□ -1.15
TRAV1-2-201ENST00000390423 CHD9Q3L8U1 2897 aa7.85□□□□□ -1.15
TRAV1-2-201ENST00000390423 UTYO14607 1347 aa7.85□□□□□ -1.15
TRAV1-2-201ENST00000390423 GAKO14976 1311 aa7.85□□□□□ -1.15
TRAV1-2-201ENST00000390423 LDHBP07195 334 aaKnown RBP7.85□□□□□ -1.15
TRAV1-2-201ENST00000390423 NBPF7P0C2Y1 421 aaPredicted RBP7.85□□□□□ -1.15
TRAV1-2-201ENST00000390423 ADCYAP1R1P41586 468 aa7.85□□□□□ -1.15
TRAV1-2-201ENST00000390423 ERVK-9P63128 1117 aa7.85□□□□□ -1.15
TRAV1-2-201ENST00000390423 ERVK-24P63145 666 aa7.85□□□□□ -1.15
TRAV1-2-201ENST00000390423 TLE2Q04725 743 aa7.85□□□□□ -1.15
TRAV1-2-201ENST00000390423 MAP2K5Q13163 448 aa7.85□□□□□ -1.15
TRAV1-2-201ENST00000390423 PUM3Q15397 648 aaKnown RBP7.85□□□□□ -1.15
TRAV1-2-201ENST00000390423 MFSD14CQ5VZR4 134 aa7.85□□□□□ -1.15
TRAV1-2-201ENST00000390423 DIEXFQ68CQ4 756 aaKnown RBP7.85□□□□□ -1.15
TRAV1-2-201ENST00000390423 ANKRD44Q8N8A2 993 aa7.85□□□□□ -1.15
TRAV1-2-201ENST00000390423 IL27Q8NEV9 243 aa7.85□□□□□ -1.15
TRAV1-2-201ENST00000390423 NPLOC4Q8TAT6 608 aa7.85□□□□□ -1.15
TRAV1-2-201ENST00000390423 GAS2L1Q99501 681 aaPredicted RBP7.85□□□□□ -1.15
TRAV1-2-201ENST00000390423 BICC1Q9H694 974 aaKnown RBP7.85□□□□□ -1.15
TRAV1-2-201ENST00000390423 XPO5Q9HAV4 1204 aaKnown RBP eCLIP7.85□□□□□ -1.15
TRAV1-2-201ENST00000390423 C9orf78Q9NZ63 289 aaPredicted RBP7.85□□□□□ -1.15
TRAV1-2-201ENST00000390423 MUC6Q6W4X9 2439 aa7.85□□□□□ -1.15
TRAV1-2-201ENST00000390423 KIF16BQ96L93 1317 aa7.84□□□□□ -1.15
TRAV1-2-201ENST00000390423 HSFX4A0A1B0GTS1 333 aaPredicted RBP7.84□□□□□ -1.15
TRAV1-2-201ENST00000390423 HSFX3A0A1B0GWH4 333 aaPredicted RBP7.84□□□□□ -1.15
TRAV1-2-201ENST00000390423 USP17L5A8MUK1 530 aa7.84□□□□□ -1.15
TRAV1-2-201ENST00000390423 VAMP4O75379 141 aa7.84□□□□□ -1.15
TRAV1-2-201ENST00000390423 CNMDO75829 334 aa7.84□□□□□ -1.15
TRAV1-2-201ENST00000390423 IGHA2P01877 340 aa7.84□□□□□ -1.15
TRAV1-2-201ENST00000390423 IFIT1P09914 478 aaKnown RBP7.84□□□□□ -1.15
TRAV1-2-201ENST00000390423 CYBAP13498 195 aa7.84□□□□□ -1.15
TRAV1-2-201ENST00000390423 IGFBP4P22692 258 aa7.84□□□□□ -1.15
TRAV1-2-201ENST00000390423 HOXA7P31268 230 aaPredicted RBP7.84□□□□□ -1.15
TRAV1-2-201ENST00000390423 CAP2P40123 477 aa7.84□□□□□ -1.15
TRAV1-2-201ENST00000390423 BTDP43251 543 aa7.84□□□□□ -1.15
TRAV1-2-201ENST00000390423 EDC3Q96F86 508 aaKnown RBP7.84□□□□□ -1.15
TRAV1-2-201ENST00000390423 PBX4Q9BYU1 374 aa7.84□□□□□ -1.15
TRAV1-2-201ENST00000390423 SIPA1L1O43166 1804 aa7.84□□□□□ -1.15
TRAV1-2-201ENST00000390423 CHD7Q9P2D1 2997 aa7.83□□□□□ -1.16
TRAV1-2-201ENST00000390423 KBTBD13C9JR72 458 aa7.83□□□□□ -1.16
TRAV1-2-201ENST00000390423 E9PSI1 815 aa7.83□□□□□ -1.16
TRAV1-2-201ENST00000390423 KIAA0355O15063 1070 aa7.83□□□□□ -1.16
TRAV1-2-201ENST00000390423 TBC1D12O60347 775 aa7.83□□□□□ -1.16
TRAV1-2-201ENST00000390423 MSCO60682 206 aa7.83□□□□□ -1.16
TRAV1-2-201ENST00000390423 CLTBP09497 229 aa7.83□□□□□ -1.16
TRAV1-2-201ENST00000390423 BACE1P56817 501 aa7.83□□□□□ -1.16
TRAV1-2-201ENST00000390423 RHBDL3P58872 404 aa7.83□□□□□ -1.16
TRAV1-2-201ENST00000390423 FPGSQ05932 587 aa7.83□□□□□ -1.16
TRAV1-2-201ENST00000390423 RABL6Q3YEC7 729 aaPredicted RBP7.83□□□□□ -1.16
TRAV1-2-201ENST00000390423 TMEM31Q5JXX7 168 aa7.83□□□□□ -1.16
TRAV1-2-201ENST00000390423 CCAR1Q8IX12 1150 aaKnown RBP7.83□□□□□ -1.16
TRAV1-2-201ENST00000390423 ZNF384Q8TF68 577 aa7.83□□□□□ -1.16
TRAV1-2-201ENST00000390423 BUD13Q9BRD0 619 aaKnown RBP eCLIP7.83□□□□□ -1.16
TRAV1-2-201ENST00000390423 OSBPL5Q9H0X9 879 aaPredicted RBP7.83□□□□□ -1.16
TRAV1-2-201ENST00000390423 CXXC1Q9P0U4 656 aaPredicted RBP7.83□□□□□ -1.16
TRAV1-2-201ENST00000390423 SALL1Q9NSC2 1324 aa7.82□□□□□ -1.16
TRAV1-2-201ENST00000390423 PQBP1O60828 265 aaKnown RBP7.82□□□□□ -1.16
TRAV1-2-201ENST00000390423 SLC5A1P13866 664 aa7.82□□□□□ -1.16
TRAV1-2-201ENST00000390423 RAG1P15918 1043 aa7.82□□□□□ -1.16
TRAV1-2-201ENST00000390423 PTPREP23469 700 aa7.82□□□□□ -1.16
TRAV1-2-201ENST00000390423 PHKA1P46020 1223 aa7.82□□□□□ -1.16
TRAV1-2-201ENST00000390423 MRE11P49959 708 aa7.82□□□□□ -1.16
TRAV1-2-201ENST00000390423 ATP2B2Q01814 1243 aa7.82□□□□□ -1.16
TRAV1-2-201ENST00000390423 MYO9BQ13459 2157 aa7.82□□□□□ -1.16
TRAV1-2-201ENST00000390423 LRRC41Q15345 812 aa7.82□□□□□ -1.16
TRAV1-2-201ENST00000390423 FAM47AQ5JRC9 791 aa7.82□□□□□ -1.16
TRAV1-2-201ENST00000390423 PRAMEF19Q5SWL8 479 aa7.82□□□□□ -1.16
TRAV1-2-201ENST00000390423 WDR78Q5VTH9 848 aa7.82□□□□□ -1.16
TRAV1-2-201ENST00000390423 SLC4A10Q6U841 1118 aa7.82□□□□□ -1.16
TRAV1-2-201ENST00000390423 C16orf59Q7L2K0 433 aa7.82□□□□□ -1.16
TRAV1-2-201ENST00000390423 MIER1Q8N108 512 aa7.82□□□□□ -1.16
TRAV1-2-201ENST00000390423 MICALL1Q8N3F8 863 aa7.82□□□□□ -1.16
TRAV1-2-201ENST00000390423 ARRDC4Q8NCT1 418 aa7.82□□□□□ -1.16
TRAV1-2-201ENST00000390423 GBF1Q92538 1859 aa7.82□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms