RNA–Protein interactions for RNA: ENST00000390399.3

TRBV27-201, Transcript of T cell receptor beta variable 27, humanhuman

APPRIS P1 BASIC

Gene TRBV27, Length 387 nt, Biotype TR V gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV27-201ENST00000390399 ARHGEF6Q15052 776 aa10.78□□□□□ -0.68
TRBV27-201ENST00000390399 SHROOM1Q2M3G4 852 aaPredicted RBP10.78□□□□□ -0.68
TRBV27-201ENST00000390399 TATDN1Q6P1N9 297 aa10.78□□□□□ -0.68
TRBV27-201ENST00000390399 PROCA1Q8NCQ7 364 aaPredicted RBP10.78□□□□□ -0.68
TRBV27-201ENST00000390399 DDRGK1Q96HY6 314 aa10.78□□□□□ -0.68
TRBV27-201ENST00000390399 WDR18Q9BV38 432 aa10.78□□□□□ -0.68
TRBV27-201ENST00000390399 RWDD1Q9H446 243 aaPredicted RBP10.78□□□□□ -0.68
TRBV27-201ENST00000390399 EFCC1Q9HA90 598 aa10.78□□□□□ -0.68
TRBV27-201ENST00000390399 ATP8A2Q9NTI2 1148 aa10.78□□□□□ -0.68
TRBV27-201ENST00000390399 CPA4Q9UI42 421 aa10.78□□□□□ -0.68
TRBV27-201ENST00000390399 AGTPBP1Q9UPW5 1226 aa10.78□□□□□ -0.68
TRBV27-201ENST00000390399 SLC45A1Q9Y2W3 748 aa10.78□□□□□ -0.68
TRBV27-201ENST00000390399 ADGRA2Q96PE1 1338 aa10.78□□□□□ -0.68
TRBV27-201ENST00000390399 SALL3Q9BXA9 1300 aa10.78□□□□□ -0.68
TRBV27-201ENST00000390399 RNF113AO15541 343 aaKnown RBP10.77□□□□□ -0.69
TRBV27-201ENST00000390399 GH2P01242 217 aa10.77□□□□□ -0.69
TRBV27-201ENST00000390399 ZFYP08048 801 aaPredicted RBP10.77□□□□□ -0.69
TRBV27-201ENST00000390399 CYP2C8P10632 490 aa10.77□□□□□ -0.69
TRBV27-201ENST00000390399 CYP2D6P10635 497 aa10.77□□□□□ -0.69
TRBV27-201ENST00000390399 LACTBP83111 547 aaPredicted RBP10.77□□□□□ -0.69
TRBV27-201ENST00000390399 CAP1Q01518 475 aa10.77□□□□□ -0.69
TRBV27-201ENST00000390399 MTMR2Q13614 643 aa10.77□□□□□ -0.69
TRBV27-201ENST00000390399 LRRFIP1Q32MZ4 808 aaKnown RBP10.77□□□□□ -0.69
TRBV27-201ENST00000390399 CERKLQ49MI3 558 aaPredicted RBP10.77□□□□□ -0.69
TRBV27-201ENST00000390399 TREML2Q5T2D2 321 aa10.77□□□□□ -0.69
TRBV27-201ENST00000390399 C17orf99Q6UX52 265 aa10.77□□□□□ -0.69
TRBV27-201ENST00000390399 AMOTL1Q8IY63 956 aa10.77□□□□□ -0.69
TRBV27-201ENST00000390399 APPBP2Q92624 585 aa10.77□□□□□ -0.69
TRBV27-201ENST00000390399 FSD1Q9BTV5 496 aa10.77□□□□□ -0.69
TRBV27-201ENST00000390399 PUS7LQ9H0K6 701 aaKnown RBP10.77□□□□□ -0.69
TRBV27-201ENST00000390399 PNMA3Q9UL41 463 aa10.77□□□□□ -0.69
TRBV27-201ENST00000390399 SLC4A4Q9Y6R1 1079 aa10.77□□□□□ -0.69
TRBV27-201ENST00000390399 ZSWIM8A7E2V4 1837 aa10.77□□□□□ -0.69
TRBV27-201ENST00000390399 SHMT1P34896 483 aa10.76□□□□□ -0.69
TRBV27-201ENST00000390399 BACE1P56817 501 aa10.76□□□□□ -0.69
TRBV27-201ENST00000390399 EVX2Q03828 476 aa10.76□□□□□ -0.69
TRBV27-201ENST00000390399 GABPAQ06546 454 aa10.76□□□□□ -0.69
TRBV27-201ENST00000390399 PABPC4Q13310 644 aaKnown RBP eCLIP10.76□□□□□ -0.69
TRBV27-201ENST00000390399 ABCB5Q2M3G0 1257 aa10.76□□□□□ -0.69
TRBV27-201ENST00000390399 SH3D19Q5HYK7 790 aa10.76□□□□□ -0.69
TRBV27-201ENST00000390399 SMCR8Q8TEV9 937 aaPredicted RBP10.76□□□□□ -0.69
TRBV27-201ENST00000390399 ARHGAP39Q9C0H5 1083 aa10.76□□□□□ -0.69
TRBV27-201ENST00000390399 CABP5Q9NP86 173 aa10.76□□□□□ -0.69
TRBV27-201ENST00000390399 TMOD4Q9NZQ9 345 aa10.76□□□□□ -0.69
TRBV27-201ENST00000390399 PTPN22Q9Y2R2 807 aa10.76□□□□□ -0.69
TRBV27-201ENST00000390399 BAZ2AQ9UIF9 1905 aaKnown RBP10.76□□□□□ -0.69
TRBV27-201ENST00000390399 C19orf81C9J6K1 198 aa10.75□□□□□ -0.69
TRBV27-201ENST00000390399 USP17L10C9JJH3 530 aa10.75□□□□□ -0.69
TRBV27-201ENST00000390399 ECM2O94769 699 aaPredicted RBP10.75□□□□□ -0.69
TRBV27-201ENST00000390399 IGHDP01880 384 aa10.75□□□□□ -0.69
TRBV27-201ENST00000390399 BCRP11274 1271 aa10.75□□□□□ -0.69
TRBV27-201ENST00000390399 OSBPP22059 807 aa10.75□□□□□ -0.69
TRBV27-201ENST00000390399 RAB3GAP1Q15042 981 aa10.75□□□□□ -0.69
TRBV27-201ENST00000390399 B4GALNT3Q6L9W6 998 aa10.75□□□□□ -0.69
TRBV27-201ENST00000390399 SMC5Q8IY18 1101 aa10.75□□□□□ -0.69
TRBV27-201ENST00000390399 OSBP2Q969R2 916 aa10.75□□□□□ -0.69
TRBV27-201ENST00000390399 STRBPQ96SI9 672 aaKnown RBP10.75□□□□□ -0.69
TRBV27-201ENST00000390399 FEZ1Q99689 392 aa10.75□□□□□ -0.69
TRBV27-201ENST00000390399 LNPKQ9C0E8 428 aa10.75□□□□□ -0.69
TRBV27-201ENST00000390399 STAP2Q9UGK3 403 aa10.75□□□□□ -0.69
TRBV27-201ENST00000390399 SWAP70Q9UH65 585 aa10.75□□□□□ -0.69
TRBV27-201ENST00000390399 TAOK2Q9UL54 1235 aa10.75□□□□□ -0.69
TRBV27-201ENST00000390399 CYP2D7A0A087X1C5 515 aa10.74□□□□□ -0.69
TRBV27-201ENST00000390399 USP17L12C9JPN9 530 aa10.74□□□□□ -0.69
TRBV27-201ENST00000390399 USP17L21D6R901 530 aa10.74□□□□□ -0.69
TRBV27-201ENST00000390399 M0R2C6 588 aa10.74□□□□□ -0.69
TRBV27-201ENST00000390399 MPHOSPH10O00566 681 aaKnown RBP10.74□□□□□ -0.69
TRBV27-201ENST00000390399 GPAA1O43292 621 aa10.74□□□□□ -0.69
TRBV27-201ENST00000390399 GNRH1P01148 92 aa10.74□□□□□ -0.69
TRBV27-201ENST00000390399 PSMC4P43686 418 aa10.74□□□□□ -0.69
TRBV27-201ENST00000390399 PDE1AP54750 535 aa10.74□□□□□ -0.69
TRBV27-201ENST00000390399 SOX10P56693 466 aa10.74□□□□□ -0.69
TRBV27-201ENST00000390399 IRX6P78412 446 aaPredicted RBP10.74□□□□□ -0.69
TRBV27-201ENST00000390399 C12orf60Q5U649 245 aa10.74□□□□□ -0.69
TRBV27-201ENST00000390399 USP17L2Q6R6M4 530 aa10.74□□□□□ -0.69
TRBV27-201ENST00000390399 SLC44A5Q8NCS7 719 aa10.74□□□□□ -0.69
TRBV27-201ENST00000390399 DYNLL2Q96FJ2 89 aa10.74□□□□□ -0.69
TRBV27-201ENST00000390399 ARPP21Q9UBL0 812 aaPredicted RBP10.74□□□□□ -0.69
TRBV27-201ENST00000390399 MYH8P13535 1937 aa10.74□□□□□ -0.69
TRBV27-201ENST00000390399 FMNL1O95466 1100 aaPredicted RBP10.73□□□□□ -0.69
TRBV27-201ENST00000390399 GNAT2P19087 354 aa10.73□□□□□ -0.69
TRBV27-201ENST00000390399 CTGFP29279 349 aa10.73□□□□□ -0.69
TRBV27-201ENST00000390399 GUCY1A2P33402 732 aa10.73□□□□□ -0.69
TRBV27-201ENST00000390399 FCGRTP55899 365 aa10.73□□□□□ -0.69
TRBV27-201ENST00000390399 IRX3P78415 501 aaPredicted RBP10.73□□□□□ -0.69
TRBV27-201ENST00000390399 NUCB1Q02818 461 aa10.73□□□□□ -0.69
TRBV27-201ENST00000390399 SEPT2Q15019 361 aa10.73□□□□□ -0.69
TRBV27-201ENST00000390399 ZYXQ15942 572 aaKnown RBP10.73□□□□□ -0.69
TRBV27-201ENST00000390399 GIMAP6Q6P9H5 292 aa10.73□□□□□ -0.69
TRBV27-201ENST00000390399 CTR9Q6PD62 1173 aa10.73□□□□□ -0.69
TRBV27-201ENST00000390399 C16orf86Q6ZW13 317 aa10.73□□□□□ -0.69
TRBV27-201ENST00000390399 CHD1LQ86WJ1 897 aa10.73□□□□□ -0.69
TRBV27-201ENST00000390399 ANKRD13CQ8N6S4 541 aa10.73□□□□□ -0.69
TRBV27-201ENST00000390399 EVI5LQ96CN4 794 aa10.73□□□□□ -0.69
TRBV27-201ENST00000390399 TRIM47Q96LD4 638 aa10.73□□□□□ -0.69
TRBV27-201ENST00000390399 ASCC2Q9H1I8 757 aaPredicted RBP10.73□□□□□ -0.69
TRBV27-201ENST00000390399 PTCH2Q9Y6C5 1203 aa10.73□□□□□ -0.69
TRBV27-201ENST00000390399 HTTP42858 3142 aa10.72□□□□□ -0.69
TRBV27-201ENST00000390399 GSG1L2A8MUP6 293 aa10.72□□□□□ -0.69
TRBV27-201ENST00000390399 SMIM22K7EJ46 135 aa10.72□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms