RNA–Protein interactions for RNA: ENST00000390353.2

TRBV6-1-201, Transcript of T cell receptor beta variable 6-1, humanhuman

APPRIS P1 BASIC

Gene TRBV6-1, Length 401 nt, Biotype TR V gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV6-1-201ENST00000390353 HNRNPUQ00839 825 aaKnown RBP eCLIP10.13□□□□□ -0.79
TRBV6-1-201ENST00000390353 TTF1Q15361 905 aaPredicted RBP10.13□□□□□ -0.79
TRBV6-1-201ENST00000390353 CCDC84Q86UT8 332 aaPredicted RBP10.13□□□□□ -0.79
TRBV6-1-201ENST00000390353 FEZ1Q99689 392 aa10.13□□□□□ -0.79
TRBV6-1-201ENST00000390353 NUDT12Q9BQG2 462 aa10.13□□□□□ -0.79
TRBV6-1-201ENST00000390353 XRN2Q9H0D6 950 aaKnown RBP eCLIP10.13□□□□□ -0.79
TRBV6-1-201ENST00000390353 EHD4Q9H223 541 aa10.13□□□□□ -0.79
TRBV6-1-201ENST00000390353 CHMP4BQ9H444 224 aaKnown RBP10.13□□□□□ -0.79
TRBV6-1-201ENST00000390353 PALD1Q9ULE6 856 aa10.13□□□□□ -0.79
TRBV6-1-201ENST00000390353 ZBTB21Q9ULJ3 1066 aa10.13□□□□□ -0.79
TRBV6-1-201ENST00000390353 MKI67P46013 3256 aaKnown RBP10.13□□□□□ -0.79
TRBV6-1-201ENST00000390353 XRCC5P13010 732 aaKnown RBP10.12□□□□□ -0.79
TRBV6-1-201ENST00000390353 ZAP70P43403 619 aa10.12□□□□□ -0.79
TRBV6-1-201ENST00000390353 HERVK_113P62684 666 aa10.12□□□□□ -0.79
TRBV6-1-201ENST00000390353 USP17L2Q6R6M4 530 aa10.12□□□□□ -0.79
TRBV6-1-201ENST00000390353 CRISPLD2Q9H0B8 497 aa10.12□□□□□ -0.79
TRBV6-1-201ENST00000390353 CABP5Q9NP86 173 aa10.12□□□□□ -0.79
TRBV6-1-201ENST00000390353 FRMD4AQ9P2Q2 1039 aaPredicted RBP10.12□□□□□ -0.79
TRBV6-1-201ENST00000390353 SERPINB13Q9UIV8 391 aa10.12□□□□□ -0.79
TRBV6-1-201ENST00000390353 DBNLQ9UJU6 430 aaKnown RBP10.12□□□□□ -0.79
TRBV6-1-201ENST00000390353 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP10.12□□□□□ -0.79
TRBV6-1-201ENST00000390353 DOCK2Q92608 1830 aa10.12□□□□□ -0.79
TRBV6-1-201ENST00000390353 ZBTB7BO15156 539 aaPredicted RBP10.11□□□□□ -0.79
TRBV6-1-201ENST00000390353 HMMRO75330 724 aa10.11□□□□□ -0.79
TRBV6-1-201ENST00000390353 ZKSCAN1P17029 563 aaPredicted RBP10.11□□□□□ -0.79
TRBV6-1-201ENST00000390353 RGS2P41220 211 aa10.11□□□□□ -0.79
TRBV6-1-201ENST00000390353 NBPF3Q9H094 633 aa10.11□□□□□ -0.79
TRBV6-1-201ENST00000390353 SAP30BPQ9UHR5 308 aaKnown RBP10.11□□□□□ -0.79
TRBV6-1-201ENST00000390353 AK9Q5TCS8 1911 aa10.11□□□□□ -0.79
TRBV6-1-201ENST00000390353 MYH2Q9UKX2 1941 aa10.11□□□□□ -0.79
TRBV6-1-201ENST00000390353 USP17L15C9J2P7 530 aa10.1□□□□□ -0.79
TRBV6-1-201ENST00000390353 USP17L13C9JLJ4 530 aa10.1□□□□□ -0.79
TRBV6-1-201ENST00000390353 USP17L11C9JVI0 530 aa10.1□□□□□ -0.79
TRBV6-1-201ENST00000390353 USP17L18D6R9N7 530 aa10.1□□□□□ -0.79
TRBV6-1-201ENST00000390353 USP17L22D6RA61 530 aa10.1□□□□□ -0.79
TRBV6-1-201ENST00000390353 USP17L17D6RBQ6 530 aa10.1□□□□□ -0.79
TRBV6-1-201ENST00000390353 USP17L19D6RCP7 530 aa10.1□□□□□ -0.79
TRBV6-1-201ENST00000390353 USP17L20D6RJB6 530 aa10.1□□□□□ -0.79
TRBV6-1-201ENST00000390353 GDF11O95390 407 aa10.1□□□□□ -0.79
TRBV6-1-201ENST00000390353 SLURP2P0DP57 97 aa10.1□□□□□ -0.79
TRBV6-1-201ENST00000390353 USP17L24Q0WX57 530 aa10.1□□□□□ -0.79
TRBV6-1-201ENST00000390353 TATDN1Q6P1N9 297 aa10.1□□□□□ -0.79
TRBV6-1-201ENST00000390353 ADGRA1Q86SQ6 560 aa10.1□□□□□ -0.79
TRBV6-1-201ENST00000390353 AACSQ86V21 672 aa10.1□□□□□ -0.79
TRBV6-1-201ENST00000390353 CLASRPQ8N2M8 674 aaKnown RBP10.1□□□□□ -0.79
TRBV6-1-201ENST00000390353 MAGEB6Q8N7X4 407 aa10.1□□□□□ -0.79
TRBV6-1-201ENST00000390353 PAWRQ96IZ0 340 aaKnown RBP10.1□□□□□ -0.79
TRBV6-1-201ENST00000390353 P2RX7Q99572 595 aaKnown RBP10.1□□□□□ -0.79
TRBV6-1-201ENST00000390353 CRNKL1Q9BZJ0 848 aaKnown RBP10.1□□□□□ -0.79
TRBV6-1-201ENST00000390353 CCDC8Q9H0W5 538 aaPredicted RBP10.1□□□□□ -0.79
TRBV6-1-201ENST00000390353 C1orf115Q9H7X2 142 aa10.1□□□□□ -0.79
TRBV6-1-201ENST00000390353 PIH1D3Q9NQM4 214 aaKnown RBP10.1□□□□□ -0.79
TRBV6-1-201ENST00000390353 RBM27Q9P2N5 1060 aaKnown RBP10.1□□□□□ -0.79
TRBV6-1-201ENST00000390353 GJD2Q9UKL4 321 aa10.1□□□□□ -0.79
TRBV6-1-201ENST00000390353 TNNQ9UQP3 1299 aa10.1□□□□□ -0.79
TRBV6-1-201ENST00000390353 RABGAP1Q9Y3P9 1069 aa10.1□□□□□ -0.79
TRBV6-1-201ENST00000390353 BRCA2P51587 3418 aa10.1□□□□□ -0.79
TRBV6-1-201ENST00000390353 DOCK1Q14185 1865 aa10.1□□□□□ -0.79
TRBV6-1-201ENST00000390353 GH2P01242 217 aa10.09□□□□□ -0.79
TRBV6-1-201ENST00000390353 PRKAR2AP13861 404 aaKnown RBP10.09□□□□□ -0.79
TRBV6-1-201ENST00000390353 ERVK-9P63128 1117 aa10.09□□□□□ -0.79
TRBV6-1-201ENST00000390353 ERVK-24P63145 666 aa10.09□□□□□ -0.79
TRBV6-1-201ENST00000390353 RRP1BQ14684 758 aaKnown RBP10.09□□□□□ -0.79
TRBV6-1-201ENST00000390353 ABCB5Q2M3G0 1257 aa10.09□□□□□ -0.79
TRBV6-1-201ENST00000390353 CERKLQ49MI3 558 aaPredicted RBP10.09□□□□□ -0.79
TRBV6-1-201ENST00000390353 CEP85Q6P2H3 762 aa10.09□□□□□ -0.79
TRBV6-1-201ENST00000390353 PLEKHH3Q7Z736 793 aa10.09□□□□□ -0.79
TRBV6-1-201ENST00000390353 AMOTL1Q8IY63 956 aa10.09□□□□□ -0.79
TRBV6-1-201ENST00000390353 MIGA1Q8NAN2 632 aa10.09□□□□□ -0.79
TRBV6-1-201ENST00000390353 EAF2Q96CJ1 260 aaPredicted RBP10.09□□□□□ -0.79
TRBV6-1-201ENST00000390353 DDRGK1Q96HY6 314 aa10.09□□□□□ -0.79
TRBV6-1-201ENST00000390353 C12orf42Q96LP6 360 aa10.09□□□□□ -0.79
TRBV6-1-201ENST00000390353 APBA2Q99767 749 aa10.09□□□□□ -0.79
TRBV6-1-201ENST00000390353 KIAA1683Q9H0B3 1180 aa10.09□□□□□ -0.79
TRBV6-1-201ENST00000390353 DNAJC18Q9H819 358 aa10.09□□□□□ -0.79
TRBV6-1-201ENST00000390353 IVNS1ABPQ9Y6Y0 642 aa10.09□□□□□ -0.79
TRBV6-1-201ENST00000390353 MAGEB6P1A0A0J9YX57 407 aa10.08□□□□□ -0.8
TRBV6-1-201ENST00000390353 MSCO60682 206 aa10.08□□□□□ -0.8
TRBV6-1-201ENST00000390353 POLR3DP05423 398 aaPredicted RBP10.08□□□□□ -0.8
TRBV6-1-201ENST00000390353 IFIT2P09913 472 aaKnown RBP10.08□□□□□ -0.8
TRBV6-1-201ENST00000390353 CYP2B6P20813 491 aa10.08□□□□□ -0.8
TRBV6-1-201ENST00000390353 RAB3GAP1Q15042 981 aa10.08□□□□□ -0.8
TRBV6-1-201ENST00000390353 MAP3K21Q5TCX8 1036 aa10.08□□□□□ -0.8
TRBV6-1-201ENST00000390353 MFSD14CQ5VZR4 134 aa10.08□□□□□ -0.8
TRBV6-1-201ENST00000390353 GPR142Q7Z601 462 aa10.08□□□□□ -0.8
TRBV6-1-201ENST00000390353 RPAP2Q8IXW5 612 aaPredicted RBP10.08□□□□□ -0.8
TRBV6-1-201ENST00000390353 PPIL4Q8WUA2 492 aaKnown RBP eCLIP10.08□□□□□ -0.8
TRBV6-1-201ENST00000390353 KIF1BPQ96EK5 621 aa10.08□□□□□ -0.8
TRBV6-1-201ENST00000390353 PAGR1Q9BTK6 254 aa10.08□□□□□ -0.8
TRBV6-1-201ENST00000390353 C11orf49Q9H6J7 331 aa10.08□□□□□ -0.8
TRBV6-1-201ENST00000390353 SH2D4AQ9H788 454 aa10.08□□□□□ -0.8
TRBV6-1-201ENST00000390353 EMILIN3Q9NT22 766 aa10.08□□□□□ -0.8
TRBV6-1-201ENST00000390353 TLR7Q9NYK1 1049 aaKnown RBP10.08□□□□□ -0.8
TRBV6-1-201ENST00000390353 RBPJLQ9UBG7 517 aa10.08□□□□□ -0.8
TRBV6-1-201ENST00000390353 OGDHLQ9ULD0 1010 aa10.08□□□□□ -0.8
TRBV6-1-201ENST00000390353 ZBED9Q6R2W3 1325 aa10.07□□□□□ -0.8
TRBV6-1-201ENST00000390353 DYNLL1P63167 89 aaKnown RBP10.07□□□□□ -0.8
TRBV6-1-201ENST00000390353 SLC9C2Q5TAH2 1124 aa10.07□□□□□ -0.8
TRBV6-1-201ENST00000390353 LBX2Q6XYB7 198 aa10.07□□□□□ -0.8
TRBV6-1-201ENST00000390353 RHPN1Q8TCX5 695 aa10.07□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms