RNA–Protein interactions for RNA: ENST00000389195.6

LTN1-203, Transcript of listerin E3 ubiquitin protein ligase 1, humanhuman

TSL 1 (best) BASIC

Gene LTN1, Length 2,714 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTN1-203ENST00000389195 STK38Q15208 465 aa11.79□□□□□ -0.52
LTN1-203ENST00000389195 LUZP1Q86V48 1076 aa11.79□□□□□ -0.52
LTN1-203ENST00000389195 IQCA1Q86XH1 822 aa11.79□□□□□ -0.52
LTN1-203ENST00000389195 GPKOWQ92917 476 aaPredicted RBP eCLIP11.79□□□□□ -0.52
LTN1-203ENST00000389195 ZNF830Q96NB3 372 aaPredicted RBP11.79□□□□□ -0.52
LTN1-203ENST00000389195 TNMDQ9H2S6 317 aa11.79□□□□□ -0.52
LTN1-203ENST00000389195 ATF5Q9Y2D1 282 aaPredicted RBP11.79□□□□□ -0.52
LTN1-203ENST00000389195 NDUFA8P51970 172 aa11.79□□□□□ -0.52
LTN1-203ENST00000389195 SPTY2D1Q68D10 685 aaPredicted RBP11.79□□□□□ -0.52
LTN1-203ENST00000389195 FSIP1Q8NA03 581 aa11.79□□□□□ -0.52
LTN1-203ENST00000389195 NUP62CLQ9H1M0 184 aa11.79□□□□□ -0.52
LTN1-203ENST00000389195 VAT1LQ9HCJ6 419 aa11.79□□□□□ -0.52
LTN1-203ENST00000389195 H0YIN7 160 aa11.78□□□□□ -0.52
LTN1-203ENST00000389195 BIN1O00499 593 aa11.78□□□□□ -0.52
LTN1-203ENST00000389195 DIS3L2Q8IYB7 885 aaKnown RBP11.78□□□□□ -0.52
LTN1-203ENST00000389195 MASTLQ96GX5 879 aa11.78□□□□□ -0.52
LTN1-203ENST00000389195 ATP8A2Q9NTI2 1148 aa11.78□□□□□ -0.52
LTN1-203ENST00000389195 ANAPC4Q9UJX5 808 aa11.78□□□□□ -0.52
LTN1-203ENST00000389195 CFAP45Q9UL16 551 aa11.78□□□□□ -0.52
LTN1-203ENST00000389195 DDX52Q9Y2R4 599 aaKnown RBP eCLIP11.78□□□□□ -0.52
LTN1-203ENST00000389195 FLT1P17948 1338 aa11.78□□□□□ -0.52
LTN1-203ENST00000389195 TSPY3P0CV98 308 aa11.78□□□□□ -0.52
LTN1-203ENST00000389195 TSPY8P0CW00 308 aa11.78□□□□□ -0.52
LTN1-203ENST00000389195 PDE6BP35913 854 aa11.78□□□□□ -0.52
LTN1-203ENST00000389195 SNW1Q13573 536 aaKnown RBP11.78□□□□□ -0.52
LTN1-203ENST00000389195 PKN1Q16512 942 aa11.78□□□□□ -0.52
LTN1-203ENST00000389195 LINC00301Q8NCQ3 95 aa11.78□□□□□ -0.52
LTN1-203ENST00000389195 RASGRP4Q8TDF6 673 aa11.78□□□□□ -0.52
LTN1-203ENST00000389195 SYAP1Q96A49 352 aaPredicted RBP11.78□□□□□ -0.52
LTN1-203ENST00000389195 CABP5Q9NP86 173 aa11.78□□□□□ -0.52
LTN1-203ENST00000389195 PODXL2Q9NZ53 605 aa11.78□□□□□ -0.52
LTN1-203ENST00000389195 RCOR1Q9UKL0 485 aa11.78□□□□□ -0.52
LTN1-203ENST00000389195 FMNL1O95466 1100 aaPredicted RBP11.77□□□□□ -0.52
LTN1-203ENST00000389195 BAG3O95817 575 aa11.77□□□□□ -0.52
LTN1-203ENST00000389195 TOB1P50616 345 aaPredicted RBP11.77□□□□□ -0.52
LTN1-203ENST00000389195 CATIPQ7Z7H3 387 aa11.77□□□□□ -0.52
LTN1-203ENST00000389195 NOL10Q9BSC4 688 aaKnown RBP11.77□□□□□ -0.52
LTN1-203ENST00000389195 SLX4Q8IY92 1834 aa11.77□□□□□ -0.53
LTN1-203ENST00000389195 IFNAR1P17181 557 aa11.77□□□□□ -0.53
LTN1-203ENST00000389195 ATP2B2Q01814 1243 aa11.77□□□□□ -0.53
LTN1-203ENST00000389195 PDE4BQ07343 736 aa11.77□□□□□ -0.53
LTN1-203ENST00000389195 SLC35G1Q2M3R5 365 aa11.77□□□□□ -0.53
LTN1-203ENST00000389195 CPLX2Q6PUV4 134 aaKnown RBP11.77□□□□□ -0.53
LTN1-203ENST00000389195 USP17L2Q6R6M4 530 aa11.77□□□□□ -0.53
LTN1-203ENST00000389195 GNL3Q9BVP2 549 aaKnown RBP eCLIP11.77□□□□□ -0.53
LTN1-203ENST00000389195 DNAJC25Q9H1X3 360 aa11.77□□□□□ -0.53
LTN1-203ENST00000389195 USP40Q9NVE5 1235 aa11.77□□□□□ -0.53
LTN1-203ENST00000389195 ZBTB12Q9Y330 459 aaPredicted RBP11.77□□□□□ -0.53
LTN1-203ENST00000389195 KIF3AQ9Y496 699 aa11.77□□□□□ -0.53
LTN1-203ENST00000389195 PCDHB6Q9Y5E3 794 aa11.77□□□□□ -0.53
LTN1-203ENST00000389195 ADAMTSL1Q8N6G6 1762 aa11.77□□□□□ -0.53
LTN1-203ENST00000389195 CDK8P49336 464 aa11.76□□□□□ -0.53
LTN1-203ENST00000389195 TRIM29Q14134 588 aa11.76□□□□□ -0.53
LTN1-203ENST00000389195 ANO6Q4KMQ2 910 aa11.76□□□□□ -0.53
LTN1-203ENST00000389195 USP49Q70CQ1 688 aa11.76□□□□□ -0.53
LTN1-203ENST00000389195 ZNF444Q8N0Y2 327 aaPredicted RBP11.76□□□□□ -0.53
LTN1-203ENST00000389195 WDR19Q8NEZ3 1342 aa11.76□□□□□ -0.53
LTN1-203ENST00000389195 GPR75-ASB3A0A0A6YYF3 556 aa11.76□□□□□ -0.53
LTN1-203ENST00000389195 SPTLC2O15270 562 aa11.76□□□□□ -0.53
LTN1-203ENST00000389195 RAD17O75943 681 aa11.76□□□□□ -0.53
LTN1-203ENST00000389195 ALDH1B1P30837 517 aa11.76□□□□□ -0.53
LTN1-203ENST00000389195 FUT2Q10981 343 aa11.76□□□□□ -0.53
LTN1-203ENST00000389195 ANO1Q5XXA6 986 aa11.76□□□□□ -0.53
LTN1-203ENST00000389195 HOMER1Q86YM7 354 aa11.76□□□□□ -0.53
LTN1-203ENST00000389195 UIMC1Q96RL1 719 aa11.76□□□□□ -0.53
LTN1-203ENST00000389195 FUCA2Q9BTY2 467 aa11.76□□□□□ -0.53
LTN1-203ENST00000389195 UBA5Q9GZZ9 404 aa11.76□□□□□ -0.53
LTN1-203ENST00000389195 STK32BQ9NY57 414 aa11.76□□□□□ -0.53
LTN1-203ENST00000389195 ARPP21Q9UBL0 812 aaPredicted RBP11.76□□□□□ -0.53
LTN1-203ENST00000389195 RASA1P20936 1047 aa11.75□□□□□ -0.53
LTN1-203ENST00000389195 MAP3K11Q16584 847 aa11.75□□□□□ -0.53
LTN1-203ENST00000389195 TRIM22Q8IYM9 498 aa11.75□□□□□ -0.53
LTN1-203ENST00000389195 LRRC47Q8N1G4 583 aaKnown RBP11.75□□□□□ -0.53
LTN1-203ENST00000389195 PDILTQ8N807 584 aa11.75□□□□□ -0.53
LTN1-203ENST00000389195 PNMA1Q8ND90 353 aa11.75□□□□□ -0.53
LTN1-203ENST00000389195 ZNF277Q9NRM2 450 aaPredicted RBP11.75□□□□□ -0.53
LTN1-203ENST00000389195 CCDC88AQ3V6T2 1871 aa11.75□□□□□ -0.53
LTN1-203ENST00000389195 ELP1O95163 1332 aa11.75□□□□□ -0.53
LTN1-203ENST00000389195 FRMPD2Q68DX3 1309 aaPredicted RBP11.75□□□□□ -0.53
LTN1-203ENST00000389195 DUOX1Q9NRD9 1551 aa11.75□□□□□ -0.53
LTN1-203ENST00000389195 FOXN1O15353 648 aa11.75□□□□□ -0.53
LTN1-203ENST00000389195 CDKL5O76039 1030 aa11.75□□□□□ -0.53
LTN1-203ENST00000389195 CSPP1Q1MSJ5 1256 aa11.75□□□□□ -0.53
LTN1-203ENST00000389195 TYW1BQ6NUM6 668 aa11.75□□□□□ -0.53
LTN1-203ENST00000389195 CEP95Q96GE4 821 aa11.75□□□□□ -0.53
LTN1-203ENST00000389195 ZNF396Q96N95 335 aaPredicted RBP11.75□□□□□ -0.53
LTN1-203ENST00000389195 ISY1Q9ULR0 285 aaKnown RBP11.75□□□□□ -0.53
LTN1-203ENST00000389195 COL11A2P13942 1736 aaPredicted RBP11.75□□□□□ -0.53
LTN1-203ENST00000389195 ECE2O60344 883 aa11.74□□□□□ -0.53
LTN1-203ENST00000389195 TYRO3Q06418 890 aa11.74□□□□□ -0.53
LTN1-203ENST00000389195 CDC42EP5Q6NZY7 148 aa11.74□□□□□ -0.53
LTN1-203ENST00000389195 SPC24Q8NBT2 197 aa11.74□□□□□ -0.53
LTN1-203ENST00000389195 EYA3Q99504 573 aa11.74□□□□□ -0.53
LTN1-203ENST00000389195 FRMD4AQ9P2Q2 1039 aaPredicted RBP11.74□□□□□ -0.53
LTN1-203ENST00000389195 CYTH3O43739 400 aa11.74□□□□□ -0.53
LTN1-203ENST00000389195 MMP1P03956 469 aa11.74□□□□□ -0.53
LTN1-203ENST00000389195 FGRP09769 529 aa11.74□□□□□ -0.53
LTN1-203ENST00000389195 CDC25AP30304 524 aa11.74□□□□□ -0.53
LTN1-203ENST00000389195 AKAP17AQ02040 695 aaKnown RBP11.74□□□□□ -0.53
LTN1-203ENST00000389195 APOBEC3HQ6NTF7 200 aaKnown RBP11.74□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms