RNA–Protein interactions for RNA: ENST00000383861.1

RNU1-28P-201, Transcript of RNA, U1 small nuclear 28, pseudogene, humanhuman

BASIC

Gene RNU1-28P, Length 164 nt, Biotype snRNA, Subcellular localisation Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU1-28P-201ENST00000383861 ANKS1AQ92625 1134 aa10.37□□□□□ -0.75
RNU1-28P-201ENST00000383861 GTF3C6Q969F1 213 aa10.37□□□□□ -0.75
RNU1-28P-201ENST00000383861 DYNLL2Q96FJ2 89 aa10.37□□□□□ -0.75
RNU1-28P-201ENST00000383861 VEZTQ9HBM0 779 aa10.37□□□□□ -0.75
RNU1-28P-201ENST00000383861 NAP1L2Q9ULW6 460 aaPredicted RBP10.37□□□□□ -0.75
RNU1-28P-201ENST00000383861 PCDHAC2Q9Y5I4 1007 aa10.37□□□□□ -0.75
RNU1-28P-201ENST00000383861 TACC3Q9Y6A5 838 aa10.37□□□□□ -0.75
RNU1-28P-201ENST00000383861 FOCADQ5VW36 1801 aa10.37□□□□□ -0.75
RNU1-28P-201ENST00000383861 DICER1Q9UPY3 1922 aaKnown RBP10.37□□□□□ -0.75
RNU1-28P-201ENST00000383861 TNKSO95271 1327 aa10.36□□□□□ -0.75
RNU1-28P-201ENST00000383861 DDX60LQ5H9U9 1706 aaKnown RBP10.36□□□□□ -0.75
RNU1-28P-201ENST00000383861 CLRN2A0PK11 232 aa10.36□□□□□ -0.75
RNU1-28P-201ENST00000383861 GOLGA8BA8MQT2 603 aa10.36□□□□□ -0.75
RNU1-28P-201ENST00000383861 TCP10L2B9ZVM9 353 aa10.36□□□□□ -0.75
RNU1-28P-201ENST00000383861 CPLX1O14810 134 aa10.36□□□□□ -0.75
RNU1-28P-201ENST00000383861 ZBTB43O43298 467 aa10.36□□□□□ -0.75
RNU1-28P-201ENST00000383861 TBC1D12O60347 775 aa10.36□□□□□ -0.75
RNU1-28P-201ENST00000383861 RASA1P20936 1047 aa10.36□□□□□ -0.75
RNU1-28P-201ENST00000383861 PDCP20941 246 aa10.36□□□□□ -0.75
RNU1-28P-201ENST00000383861 CACNB3P54284 484 aa10.36□□□□□ -0.75
RNU1-28P-201ENST00000383861 COL9A3Q14050 684 aaPredicted RBP10.36□□□□□ -0.75
RNU1-28P-201ENST00000383861 SEC23AQ15436 765 aa10.36□□□□□ -0.75
RNU1-28P-201ENST00000383861 APOA5Q6Q788 366 aa10.36□□□□□ -0.75
RNU1-28P-201ENST00000383861 CCDC83Q8IWF9 413 aa10.36□□□□□ -0.75
RNU1-28P-201ENST00000383861 SPRYD3Q8NCJ5 442 aa10.36□□□□□ -0.75
RNU1-28P-201ENST00000383861 CSRNP1Q96S65 589 aa10.36□□□□□ -0.75
RNU1-28P-201ENST00000383861 MAP3K14Q99558 947 aa10.36□□□□□ -0.75
RNU1-28P-201ENST00000383861 LARP6Q9BRS8 491 aaKnown RBP10.36□□□□□ -0.75
RNU1-28P-201ENST00000383861 ADARB2Q9NS39 739 aaKnown RBP10.36□□□□□ -0.75
RNU1-28P-201ENST00000383861 PPP2R3BQ9Y5P8 575 aa10.36□□□□□ -0.75
RNU1-28P-201ENST00000383861 ECM29Q5VYK3 1845 aa10.35□□□□□ -0.75
RNU1-28P-201ENST00000383861 BAZ2AQ9UIF9 1905 aaKnown RBP10.35□□□□□ -0.75
RNU1-28P-201ENST00000383861 DDTLA6NHG4 134 aaPredicted RBP10.35□□□□□ -0.75
RNU1-28P-201ENST00000383861 DDAH1O94760 285 aa10.35□□□□□ -0.75
RNU1-28P-201ENST00000383861 DDIT3P35638 169 aa10.35□□□□□ -0.75
RNU1-28P-201ENST00000383861 METAP2P50579 478 aaKnown RBP eCLIP10.35□□□□□ -0.75
RNU1-28P-201ENST00000383861 STK3Q13188 491 aa10.35□□□□□ -0.75
RNU1-28P-201ENST00000383861 SLC4A8Q2Y0W8 1093 aa10.35□□□□□ -0.75
RNU1-28P-201ENST00000383861 NBPF9Q3BBW0 867 aa10.35□□□□□ -0.75
RNU1-28P-201ENST00000383861 TBC1D10BQ4KMP7 808 aaPredicted RBP10.35□□□□□ -0.75
RNU1-28P-201ENST00000383861 FAM47AQ5JRC9 791 aa10.35□□□□□ -0.75
RNU1-28P-201ENST00000383861 RBM26Q5T8P6 1007 aaKnown RBP10.35□□□□□ -0.75
RNU1-28P-201ENST00000383861 TATDN1Q6P1N9 297 aa10.35□□□□□ -0.75
RNU1-28P-201ENST00000383861 ZFPM1Q8IX07 1006 aa10.35□□□□□ -0.75
RNU1-28P-201ENST00000383861 ENAHQ8N8S7 591 aaPredicted RBP10.35□□□□□ -0.75
RNU1-28P-201ENST00000383861 NECAB1Q8N987 351 aa10.35□□□□□ -0.75
RNU1-28P-201ENST00000383861 RGS22Q8NE09 1264 aa10.35□□□□□ -0.75
RNU1-28P-201ENST00000383861 L3MBTL3Q96JM7 780 aaPredicted RBP10.35□□□□□ -0.75
RNU1-28P-201ENST00000383861 ZKSCAN3Q9BRR0 538 aa10.35□□□□□ -0.75
RNU1-28P-201ENST00000383861 KAT14Q9H8E8 782 aa10.35□□□□□ -0.75
RNU1-28P-201ENST00000383861 XPO5Q9HAV4 1204 aaKnown RBP eCLIP10.35□□□□□ -0.75
RNU1-28P-201ENST00000383861 RBM28Q9NW13 759 aaKnown RBP10.35□□□□□ -0.75
RNU1-28P-201ENST00000383861 BRPF3Q9ULD4 1205 aa10.35□□□□□ -0.75
RNU1-28P-201ENST00000383861 NID2Q14112 1375 aa10.35□□□□□ -0.75
RNU1-28P-201ENST00000383861 PLIN4Q96Q06 1357 aa10.35□□□□□ -0.75
RNU1-28P-201ENST00000383861 PITPNM2Q9BZ72 1349 aa10.34□□□□□ -0.75
RNU1-28P-201ENST00000383861 CDK5RAP2Q96SN8 1893 aa10.34□□□□□ -0.75
RNU1-28P-201ENST00000383861 GOLGA8AA7E2F4 631 aa10.34□□□□□ -0.75
RNU1-28P-201ENST00000383861 SMIM22K7EJ46 135 aa10.34□□□□□ -0.75
RNU1-28P-201ENST00000383861 DDNO94850 711 aaPredicted RBP10.34□□□□□ -0.75
RNU1-28P-201ENST00000383861 LARGE1O95461 756 aa10.34□□□□□ -0.75
RNU1-28P-201ENST00000383861 KIF5BP33176 963 aa10.34□□□□□ -0.75
RNU1-28P-201ENST00000383861 SHMT1P34896 483 aa10.34□□□□□ -0.75
RNU1-28P-201ENST00000383861 SCRN1Q12765 414 aa10.34□□□□□ -0.75
RNU1-28P-201ENST00000383861 CERKLQ49MI3 558 aaPredicted RBP10.34□□□□□ -0.75
RNU1-28P-201ENST00000383861 SH3BP5LQ7L8J4 393 aa10.34□□□□□ -0.75
RNU1-28P-201ENST00000383861 SAMD7Q7Z3H4 446 aa10.34□□□□□ -0.75
RNU1-28P-201ENST00000383861 ZNF654Q8IZM8 581 aa10.34□□□□□ -0.75
RNU1-28P-201ENST00000383861 SLC44A5Q8NCS7 719 aa10.34□□□□□ -0.75
RNU1-28P-201ENST00000383861 CABP5Q9NP86 173 aa10.34□□□□□ -0.75
RNU1-28P-201ENST00000383861 FOXD4L1Q9NU39 408 aa10.34□□□□□ -0.75
RNU1-28P-201ENST00000383861 GINM1Q9NU53 330 aa10.34□□□□□ -0.75
RNU1-28P-201ENST00000383861 MYH1P12882 1939 aa10.34□□□□□ -0.75
RNU1-28P-201ENST00000383861 CNTNAP1P78357 1384 aa10.34□□□□□ -0.75
RNU1-28P-201ENST00000383861 ADAMTSL1Q8N6G6 1762 aa10.34□□□□□ -0.75
RNU1-28P-201ENST00000383861 SBF1O95248 1867 aa10.34□□□□□ -0.75
RNU1-28P-201ENST00000383861 IQCA1LA6NCM1 817 aa10.33□□□□□ -0.76
RNU1-28P-201ENST00000383861 GLTPD2A6NH11 291 aa10.33□□□□□ -0.76
RNU1-28P-201ENST00000383861 TOP1P11387 765 aaKnown RBP10.33□□□□□ -0.76
RNU1-28P-201ENST00000383861 GJB2P29033 226 aa10.33□□□□□ -0.76
RNU1-28P-201ENST00000383861 NOVP48745 357 aa10.33□□□□□ -0.76
RNU1-28P-201ENST00000383861 GNAQP50148 359 aa10.33□□□□□ -0.76
RNU1-28P-201ENST00000383861 CCT2P78371 535 aaKnown RBP10.33□□□□□ -0.76
RNU1-28P-201ENST00000383861 MAP3K10Q02779 954 aa10.33□□□□□ -0.76
RNU1-28P-201ENST00000383861 EVX2Q03828 476 aa10.33□□□□□ -0.76
RNU1-28P-201ENST00000383861 RASA3Q14644 834 aa10.33□□□□□ -0.76
RNU1-28P-201ENST00000383861 RTN1Q16799 776 aa10.33□□□□□ -0.76
RNU1-28P-201ENST00000383861 DCAF15Q66K64 600 aa10.33□□□□□ -0.76
RNU1-28P-201ENST00000383861 TMEM179Q6ZVK1 233 aa10.33□□□□□ -0.76
RNU1-28P-201ENST00000383861 USP50Q70EL3 339 aaPredicted RBP10.33□□□□□ -0.76
RNU1-28P-201ENST00000383861 MICU3Q86XE3 530 aa10.33□□□□□ -0.76
RNU1-28P-201ENST00000383861 FAM184AQ8NB25 1140 aa10.33□□□□□ -0.76
RNU1-28P-201ENST00000383861 FANCBQ8NB91 859 aa10.33□□□□□ -0.76
RNU1-28P-201ENST00000383861 CTCFLQ8NI51 663 aaPredicted RBP10.33□□□□□ -0.76
RNU1-28P-201ENST00000383861 SMARCC2Q8TAQ2 1214 aa10.33□□□□□ -0.76
RNU1-28P-201ENST00000383861 KANSL2Q9H9L4 492 aa10.33□□□□□ -0.76
RNU1-28P-201ENST00000383861 GPHNQ9NQX3 736 aaPredicted RBP10.33□□□□□ -0.76
RNU1-28P-201ENST00000383861 IL17RBQ9NRM6 502 aa10.33□□□□□ -0.76
RNU1-28P-201ENST00000383861 HACL1Q9UJ83 578 aa10.33□□□□□ -0.76
RNU1-28P-201ENST00000383861 SYNPO2Q9UMS6 1093 aa10.33□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 8.2 ms