RNA–Protein interactions for RNA: ENST00000383282.3

NPHP3-202, Transcript of nephrocystin 3, humanhuman

TSL 1 (best) BASIC

Gene NPHP3, Length 782 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP3-202ENST00000383282 EXOC6BQ9Y2D4 811 aa32.2■■■□□ 2.75
NPHP3-202ENST00000383282 USP17L10C9JJH3 530 aa32.19■■■□□ 2.74
NPHP3-202ENST00000383282 FARP2O94887 1054 aaPredicted RBP32.19■■■□□ 2.74
NPHP3-202ENST00000383282 GDF11O95390 407 aa32.19■■■□□ 2.74
NPHP3-202ENST00000383282 USP5P45974 858 aa32.19■■■□□ 2.74
NPHP3-202ENST00000383282 MAP3K12Q12852 859 aa32.19■■■□□ 2.74
NPHP3-202ENST00000383282 HSP90AB4PQ58FF6 505 aa32.19■■■□□ 2.74
NPHP3-202ENST00000383282 TMED8Q6PL24 325 aaPredicted RBP32.19■■■□□ 2.74
NPHP3-202ENST00000383282 AACSQ86V21 672 aa32.19■■■□□ 2.74
NPHP3-202ENST00000383282 MAGEB6Q8N7X4 407 aa32.19■■■□□ 2.74
NPHP3-202ENST00000383282 COLQQ9Y215 455 aaPredicted RBP32.19■■■□□ 2.74
NPHP3-202ENST00000383282 UBE2Q1Q7Z7E8 422 aa32.18■■■□□ 2.74
NPHP3-202ENST00000383282 MIGA1Q8NAN2 632 aa32.18■■■□□ 2.74
NPHP3-202ENST00000383282 ZBTB21Q9ULJ3 1066 aa32.18■■■□□ 2.74
NPHP3-202ENST00000383282 MS4A1P11836 297 aa32.17■■■□□ 2.74
NPHP3-202ENST00000383282 PANK1Q8TE04 598 aa32.17■■■□□ 2.74
NPHP3-202ENST00000383282 SIPA1L1O43166 1804 aa32.16■■■□□ 2.74
NPHP3-202ENST00000383282 TFRCP02786 760 aaKnown RBP32.16■■■□□ 2.74
NPHP3-202ENST00000383282 HOXA7P31268 230 aaPredicted RBP32.16■■■□□ 2.74
NPHP3-202ENST00000383282 DEFB118Q96PH6 123 aa32.16■■■□□ 2.74
NPHP3-202ENST00000383282 MORF4L1Q9UBU8 362 aa32.16■■■□□ 2.74
NPHP3-202ENST00000383282 JAG1P78504 1218 aa32.15■■■□□ 2.74
NPHP3-202ENST00000383282 NDUFB9Q9Y6M9 179 aa32.15■■■□□ 2.74
NPHP3-202ENST00000383282 ANTXR1Q9H6X2 564 aa32.14■■■□□ 2.74
NPHP3-202ENST00000383282 PAK6Q9NQU5 681 aaPredicted RBP32.14■■■□□ 2.74
NPHP3-202ENST00000383282 FOCADQ5VW36 1801 aa32.14■■■□□ 2.74
NPHP3-202ENST00000383282 HMGCRP04035 888 aa32.13■■■□□ 2.73
NPHP3-202ENST00000383282 NR2E3Q9Y5X4 410 aa32.13■■■□□ 2.73
NPHP3-202ENST00000383282 FXR1P51114 621 aaKnown RBP eCLIP32.12■■■□□ 2.73
NPHP3-202ENST00000383282 HERVK_113P62684 666 aa32.12■■■□□ 2.73
NPHP3-202ENST00000383282 TTF1Q15361 905 aaPredicted RBP32.12■■■□□ 2.73
NPHP3-202ENST00000383282 SHROOM1Q2M3G4 852 aaPredicted RBP32.12■■■□□ 2.73
NPHP3-202ENST00000383282 TTC6Q86TZ1 520 aa32.12■■■□□ 2.73
NPHP3-202ENST00000383282 P2RX7Q99572 595 aaKnown RBP32.12■■■□□ 2.73
NPHP3-202ENST00000383282 IL1RAPL2Q9NP60 686 aa32.12■■■□□ 2.73
NPHP3-202ENST00000383282 SERPINB13Q9UIV8 391 aa32.12■■■□□ 2.73
NPHP3-202ENST00000383282 MYO5AQ9Y4I1 1855 aaKnown RBP32.12■■■□□ 2.73
NPHP3-202ENST00000383282 USP17L2Q6R6M4 530 aa32.11■■■□□ 2.73
NPHP3-202ENST00000383282 GPRC5AQ8NFJ5 357 aa32.11■■■□□ 2.73
NPHP3-202ENST00000383282 RHPN1Q8TCX5 695 aa32.11■■■□□ 2.73
NPHP3-202ENST00000383282 GTF3C2Q8WUA4 911 aaPredicted RBP32.11■■■□□ 2.73
NPHP3-202ENST00000383282 EHD4Q9H223 541 aa32.11■■■□□ 2.73
NPHP3-202ENST00000383282 CDK5RAP2Q96SN8 1893 aa32.11■■■□□ 2.73
NPHP3-202ENST00000383282 GH2P01242 217 aa32.1■■■□□ 2.73
NPHP3-202ENST00000383282 CHRDL2Q6WN34 429 aa32.1■■■□□ 2.73
NPHP3-202ENST00000383282 CLASRPQ8N2M8 674 aaKnown RBP32.1■■■□□ 2.73
NPHP3-202ENST00000383282 XRN2Q9H0D6 950 aaKnown RBP eCLIP32.1■■■□□ 2.73
NPHP3-202ENST00000383282 GJD2Q9UKL4 321 aa32.1■■■□□ 2.73
NPHP3-202ENST00000383282 TATDN1Q6P1N9 297 aa32.09■■■□□ 2.73
NPHP3-202ENST00000383282 FEZ1Q99689 392 aa32.09■■■□□ 2.73
NPHP3-202ENST00000383282 HMMRO75330 724 aa32.08■■■□□ 2.73
NPHP3-202ENST00000383282 CCAR1Q8IX12 1150 aaKnown RBP32.08■■■□□ 2.73
NPHP3-202ENST00000383282 RPAP2Q8IXW5 612 aaPredicted RBP32.08■■■□□ 2.73
NPHP3-202ENST00000383282 KIF1BPQ96EK5 621 aa32.08■■■□□ 2.73
NPHP3-202ENST00000383282 CRISPLD2Q9H0B8 497 aa32.08■■■□□ 2.73
NPHP3-202ENST00000383282 DOCK3Q8IZD9 2030 aa32.07■■■□□ 2.72
NPHP3-202ENST00000383282 SOCS4Q8WXH5 440 aa32.07■■■□□ 2.72
NPHP3-202ENST00000383282 NUDT12Q9BQG2 462 aa32.07■■■□□ 2.72
NPHP3-202ENST00000383282 HMX1Q9NP08 348 aaPredicted RBP32.07■■■□□ 2.72
NPHP3-202ENST00000383282 EMILIN3Q9NT22 766 aa32.07■■■□□ 2.72
NPHP3-202ENST00000383282 DDX19BQ9UMR2 479 aa32.07■■■□□ 2.72
NPHP3-202ENST00000383282 RPTORQ8N122 1335 aa32.06■■■□□ 2.72
NPHP3-202ENST00000383282 MAGEB6P1A0A0J9YX57 407 aa32.06■■■□□ 2.72
NPHP3-202ENST00000383282 MAPK4P31152 587 aa32.06■■■□□ 2.72
NPHP3-202ENST00000383282 PDE3AQ14432 1141 aa32.06■■■□□ 2.72
NPHP3-202ENST00000383282 CERKLQ49MI3 558 aaPredicted RBP32.06■■■□□ 2.72
NPHP3-202ENST00000383282 TXNRD2Q9NNW7 524 aa32.06■■■□□ 2.72
NPHP3-202ENST00000383282 CABP5Q9NP86 173 aa32.06■■■□□ 2.72
NPHP3-202ENST00000383282 IFIT2P09913 472 aaKnown RBP32.05■■■□□ 2.72
NPHP3-202ENST00000383282 CYP2B6P20813 491 aa32.05■■■□□ 2.72
NPHP3-202ENST00000383282 USP14P54578 494 aa32.05■■■□□ 2.72
NPHP3-202ENST00000383282 RAB3GAP1Q15042 981 aa32.05■■■□□ 2.72
NPHP3-202ENST00000383282 RIOK1Q9BRS2 568 aaKnown RBP32.05■■■□□ 2.72
NPHP3-202ENST00000383282 CEP290O15078 2479 aa32.04■■■□□ 2.72
NPHP3-202ENST00000383282 APBB1O00213 710 aa32.04■■■□□ 2.72
NPHP3-202ENST00000383282 EVI5O60447 810 aa32.04■■■□□ 2.72
NPHP3-202ENST00000383282 POLR3DP05423 398 aaPredicted RBP32.04■■■□□ 2.72
NPHP3-202ENST00000383282 ERVK-9P63128 1117 aa32.04■■■□□ 2.72
NPHP3-202ENST00000383282 ERVK-24P63145 666 aa32.04■■■□□ 2.72
NPHP3-202ENST00000383282 ZYXQ15942 572 aaKnown RBP32.04■■■□□ 2.72
NPHP3-202ENST00000383282 ABCB5Q2M3G0 1257 aa32.04■■■□□ 2.72
NPHP3-202ENST00000383282 SLC9C2Q5TAH2 1124 aa32.04■■■□□ 2.72
NPHP3-202ENST00000383282 PPIL4Q8WUA2 492 aaKnown RBP eCLIP32.04■■■□□ 2.72
NPHP3-202ENST00000383282 C12orf42Q96LP6 360 aa32.04■■■□□ 2.72
NPHP3-202ENST00000383282 PAGR1Q9BTK6 254 aa32.04■■■□□ 2.72
NPHP3-202ENST00000383282 RBPJLQ9UBG7 517 aa32.04■■■□□ 2.72
NPHP3-202ENST00000383282 MYH1P12882 1939 aa32.03■■■□□ 2.72
NPHP3-202ENST00000383282 NECAB2Q7Z6G3 386 aa32.03■■■□□ 2.72
NPHP3-202ENST00000383282 CRNKL1Q9BZJ0 848 aaKnown RBP32.03■■■□□ 2.72
NPHP3-202ENST00000383282 CHMP4BQ9H444 224 aaKnown RBP32.03■■■□□ 2.72
NPHP3-202ENST00000383282 USP17L15C9J2P7 530 aa32.02■■■□□ 2.72
NPHP3-202ENST00000383282 USP17L13C9JLJ4 530 aa32.02■■■□□ 2.72
NPHP3-202ENST00000383282 USP17L11C9JVI0 530 aa32.02■■■□□ 2.72
NPHP3-202ENST00000383282 USP17L18D6R9N7 530 aa32.02■■■□□ 2.72
NPHP3-202ENST00000383282 USP17L22D6RA61 530 aa32.02■■■□□ 2.72
NPHP3-202ENST00000383282 USP17L17D6RBQ6 530 aa32.02■■■□□ 2.72
NPHP3-202ENST00000383282 USP17L19D6RCP7 530 aa32.02■■■□□ 2.72
NPHP3-202ENST00000383282 USP17L20D6RJB6 530 aa32.02■■■□□ 2.72
NPHP3-202ENST00000383282 PEX10O60683 326 aa32.02■■■□□ 2.72
NPHP3-202ENST00000383282 USP17L24Q0WX57 530 aa32.02■■■□□ 2.72
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms