RNA–Protein interactions for RNA: ENST00000381124.9

H2AFV-205, Transcript of H2A histone family member V, human

TSL 3 BASIC

Gene H2AFV, Length 628 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
H2AFV-205	ENST00000381124	PTCH2	Q9Y6C5	1203 aa		32.5	■■■□□ 2.79
H2AFV-205	ENST00000381124	FMNL1	O95466	1100 aa	Predicted RBP	32.49	■■■□□ 2.79
H2AFV-205	ENST00000381124	CHGB	P05060	677 aa		32.49	■■■□□ 2.79
H2AFV-205	ENST00000381124	PLCD1	P51178	756 aa		32.49	■■■□□ 2.79
H2AFV-205	ENST00000381124	MTMR2	Q13614	643 aa		32.49	■■■□□ 2.79
H2AFV-205	ENST00000381124	PNMA3	Q9UL41	463 aa		32.49	■■■□□ 2.79
H2AFV-205	ENST00000381124	GH2	P01242	217 aa		32.48	■■■□□ 2.79
H2AFV-205	ENST00000381124	BCR	P11274	1271 aa		32.48	■■■□□ 2.79
H2AFV-205	ENST00000381124	HDAC1	Q13547	482 aa	Predicted RBP	32.48	■■■□□ 2.79
H2AFV-205	ENST00000381124	UBE3C	Q15386	1083 aa		32.48	■■■□□ 2.79
H2AFV-205	ENST00000381124	PTPRF	P10586	1907 aa		32.47	■■■□□ 2.79
H2AFV-205	ENST00000381124	GNRH1	P01148	92 aa		32.47	■■■□□ 2.79
H2AFV-205	ENST00000381124	PABPC4	Q13310	644 aa	Known RBP eCLIP	32.47	■■■□□ 2.79	7e-27	■□□□□ 8.2
H2AFV-205	ENST00000381124	SH3D19	Q5HYK7	790 aa		32.47	■■■□□ 2.79
H2AFV-205	ENST00000381124	TATDN1	Q6P1N9	297 aa		32.47	■■■□□ 2.79
H2AFV-205	ENST00000381124	OTUD7A	Q8TE49	926 aa	Predicted RBP	32.47	■■■□□ 2.79
H2AFV-205	ENST00000381124	DCP1A	Q9NPI6	582 aa	Predicted RBP	32.47	■■■□□ 2.79
H2AFV-205	ENST00000381124	TMOD4	Q9NZQ9	345 aa		32.47	■■■□□ 2.79
H2AFV-205	ENST00000381124	PRKAB2	O43741	272 aa		32.46	■■■□□ 2.79
H2AFV-205	ENST00000381124	CTGF	P29279	349 aa		32.46	■■■□□ 2.79
H2AFV-205	ENST00000381124	BACE1	P56817	501 aa		32.46	■■■□□ 2.79
H2AFV-205	ENST00000381124	AAMP	Q13685	434 aa		32.46	■■■□□ 2.79
H2AFV-205	ENST00000381124	CERKL	Q49MI3	558 aa	Predicted RBP	32.46	■■■□□ 2.79
H2AFV-205	ENST00000381124	ANKRD45	Q5TZF3	282 aa		32.46	■■■□□ 2.79
H2AFV-205	ENST00000381124	TRIM47	Q96LD4	638 aa		32.46	■■■□□ 2.79
H2AFV-205	ENST00000381124	ZBTB47	Q9UFB7	747 aa	Predicted RBP	32.46	■■■□□ 2.79
H2AFV-205	ENST00000381124	SLC9C1	Q4G0N8	1177 aa		32.45	■■■□□ 2.79
H2AFV-205	ENST00000381124	ZSWIM8	A7E2V4	1837 aa		32.44	■■■□□ 2.78
H2AFV-205	ENST00000381124	USP17L10	C9JJH3	530 aa		32.44	■■■□□ 2.78
H2AFV-205	ENST00000381124	OSBP	P22059	807 aa		32.44	■■■□□ 2.78
H2AFV-205	ENST00000381124	HOXD10	P28358	340 aa		32.44	■■■□□ 2.78
H2AFV-205	ENST00000381124	ARMC5	Q96C12	935 aa		32.44	■■■□□ 2.78
H2AFV-205	ENST00000381124	SHMT1	P34896	483 aa		32.43	■■■□□ 2.78
H2AFV-205	ENST00000381124	PRMT2	P55345	433 aa		32.43	■■■□□ 2.78
H2AFV-205	ENST00000381124	FCGRT	P55899	365 aa		32.43	■■■□□ 2.78
H2AFV-205	ENST00000381124	IRX6	P78412	446 aa	Predicted RBP	32.43	■■■□□ 2.78
H2AFV-205	ENST00000381124	RAB3GAP1	Q15042	981 aa		32.43	■■■□□ 2.78
H2AFV-205	ENST00000381124	ABCB5	Q2M3G0	1257 aa		32.43	■■■□□ 2.78
H2AFV-205	ENST00000381124	KBTBD3	Q8NAB2	608 aa		32.43	■■■□□ 2.78
H2AFV-205	ENST00000381124	CABP5	Q9NP86	173 aa		32.43	■■■□□ 2.78
H2AFV-205	ENST00000381124	NAV1	Q8NEY1	1877 aa		32.43	■■■□□ 2.78
H2AFV-205	ENST00000381124	C19orf81	C9J6K1	198 aa		32.42	■■■□□ 2.78
H2AFV-205	ENST00000381124	CYP2D6	P10635	497 aa		32.42	■■■□□ 2.78
H2AFV-205	ENST00000381124	EVX2	Q03828	476 aa		32.42	■■■□□ 2.78
H2AFV-205	ENST00000381124	NBPF11	Q86T75	865 aa		32.42	■■■□□ 2.78
H2AFV-205	ENST00000381124	ANKRD13C	Q8N6S4	541 aa		32.42	■■■□□ 2.78
H2AFV-205	ENST00000381124	GCC1	Q96CN9	775 aa		32.42	■■■□□ 2.78
H2AFV-205	ENST00000381124	DDRGK1	Q96HY6	314 aa		32.42	■■■□□ 2.78
H2AFV-205	ENST00000381124	ATP8A2	Q9NTI2	1148 aa		32.42	■■■□□ 2.78
H2AFV-205	ENST00000381124	SRRD	Q9UH36	339 aa		32.42	■■■□□ 2.78
H2AFV-205	ENST00000381124	ERC2	O15083	957 aa		32.41	■■■□□ 2.78
H2AFV-205	ENST00000381124	FEZ1	Q99689	392 aa		32.41	■■■□□ 2.78
H2AFV-205	ENST00000381124	PUS7L	Q9H0K6	701 aa	Known RBP	32.41	■■■□□ 2.78
H2AFV-205	ENST00000381124	SLC4A4	Q9Y6R1	1079 aa		32.41	■■■□□ 2.78
H2AFV-205	ENST00000381124	TTC41P	Q6P2S7	1318 aa		32.41	■■■□□ 2.78
H2AFV-205	ENST00000381124	GABPA	Q06546	454 aa		32.4	■■■□□ 2.78
H2AFV-205	ENST00000381124	AMOTL1	Q8IY63	956 aa		32.4	■■■□□ 2.78
H2AFV-205	ENST00000381124	ASCC2	Q9H1I8	757 aa	Predicted RBP	32.4	■■■□□ 2.78
H2AFV-205	ENST00000381124	MYPN	Q86TC9	1320 aa		32.4	■■■□□ 2.78
H2AFV-205	ENST00000381124	DDX60L	Q5H9U9	1706 aa	Known RBP	32.4	■■■□□ 2.78
H2AFV-205	ENST00000381124	MYH7	P12883	1935 aa		32.39	■■■□□ 2.78
H2AFV-205	ENST00000381124	IRX3	P78415	501 aa	Predicted RBP	32.39	■■■□□ 2.78
H2AFV-205	ENST00000381124	RAET1E	Q8TD07	263 aa		32.39	■■■□□ 2.78
H2AFV-205	ENST00000381124	RWDD1	Q9H446	243 aa	Predicted RBP	32.39	■■■□□ 2.78
H2AFV-205	ENST00000381124	LOC285556	D6RIA3	1793 aa		32.39	■■■□□ 2.78
H2AFV-205	ENST00000381124	MPHOSPH10	O00566	681 aa	Known RBP	32.38	■■■□□ 2.77
H2AFV-205	ENST00000381124	IGHD	P01880	384 aa		32.38	■■■□□ 2.77
H2AFV-205	ENST00000381124	ZYX	Q15942	572 aa	Known RBP	32.38	■■■□□ 2.77
H2AFV-205	ENST00000381124	USP17L2	Q6R6M4	530 aa		32.38	■■■□□ 2.77
H2AFV-205	ENST00000381124	SH3TC2	Q8TF17	1288 aa		32.38	■■■□□ 2.77
H2AFV-205	ENST00000381124	GLRX3	O76003	335 aa	Known RBP	32.37	■■■□□ 2.77
H2AFV-205	ENST00000381124	MYC	P01106	439 aa	Predicted RBP	32.37	■■■□□ 2.77
H2AFV-205	ENST00000381124	GCLC	P48506	637 aa	Predicted RBP	32.37	■■■□□ 2.77
H2AFV-205	ENST00000381124	SLC44A5	Q8NCS7	719 aa		32.37	■■■□□ 2.77
H2AFV-205	ENST00000381124	DYNLL2	Q96FJ2	89 aa		32.37	■■■□□ 2.77
H2AFV-205	ENST00000381124	ZNF333	Q96JL9	665 aa		32.37	■■■□□ 2.77
H2AFV-205	ENST00000381124	TNPO2	O14787	897 aa	Known RBP	32.36	■■■□□ 2.77
H2AFV-205	ENST00000381124	RNF113A	O15541	343 aa	Known RBP	32.36	■■■□□ 2.77
H2AFV-205	ENST00000381124	MX1	P20591	662 aa		32.36	■■■□□ 2.77
H2AFV-205	ENST00000381124	FAM110C	Q1W6H9	321 aa		32.36	■■■□□ 2.77
H2AFV-205	ENST00000381124	PI4K2B	Q8TCG2	481 aa		32.36	■■■□□ 2.77
H2AFV-205	ENST00000381124	EMILIN3	Q9NT22	766 aa		32.36	■■■□□ 2.77
H2AFV-205	ENST00000381124	SWAP70	Q9UH65	585 aa		32.36	■■■□□ 2.77
H2AFV-205	ENST00000381124	CYP2D7	A0A087X1C5	515 aa		32.35	■■■□□ 2.77
H2AFV-205	ENST00000381124	POTEF	A5A3E0	1075 aa		32.35	■■■□□ 2.77
H2AFV-205	ENST00000381124	USP17L12	C9JPN9	530 aa		32.35	■■■□□ 2.77
H2AFV-205	ENST00000381124	USP17L21	D6R901	530 aa		32.35	■■■□□ 2.77
H2AFV-205	ENST00000381124	PRKCZ	Q05513	592 aa		32.35	■■■□□ 2.77
H2AFV-205	ENST00000381124	APPBP2	Q92624	585 aa		32.35	■■■□□ 2.77
H2AFV-205	ENST00000381124	TMEM106C	Q9BVX2	250 aa		32.35	■■■□□ 2.77
H2AFV-205	ENST00000381124	ZFY	P08048	801 aa	Predicted RBP	32.34	■■■□□ 2.77
H2AFV-205	ENST00000381124	HOXA7	P31268	230 aa	Predicted RBP	32.34	■■■□□ 2.77
H2AFV-205	ENST00000381124	SEPT2	Q15019	361 aa		32.34	■■■□□ 2.77
H2AFV-205	ENST00000381124	LRRFIP1	Q32MZ4	808 aa	Known RBP	32.34	■■■□□ 2.77
H2AFV-205	ENST00000381124	B4GALNT3	Q6L9W6	998 aa		32.34	■■■□□ 2.77
H2AFV-205	ENST00000381124	SALL3	Q9BXA9	1300 aa		32.33	■■■□□ 2.77
H2AFV-205	ENST00000381124	C12orf60	Q5U649	245 aa		32.33	■■■□□ 2.77
H2AFV-205	ENST00000381124	ACER1	Q8TDN7	264 aa		32.33	■■■□□ 2.77
H2AFV-205	ENST00000381124	OSBP2	Q969R2	916 aa		32.33	■■■□□ 2.77
H2AFV-205	ENST00000381124	STRBP	Q96SI9	672 aa	Known RBP	32.33	■■■□□ 2.77

Retrieved 100 of 20,778 RNA–protein pairs in 10 ms