RNA–Protein interactions for RNA: ENST00000381018.7

TRIM23-203, Transcript of tripartite motif containing 23, humanhuman

TSL 1 (best) BASIC

Gene TRIM23, Length 1,855 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM23-203ENST00000381018 CCDC88AQ3V6T2 1871 aa13.67□□□□□ -0.22
TRIM23-203ENST00000381018 COL1A1P02452 1464 aaPredicted RBP13.67□□□□□ -0.22
TRIM23-203ENST00000381018 POLR2DO15514 142 aaKnown RBP13.67□□□□□ -0.22
TRIM23-203ENST00000381018 CCP110O43303 1012 aa13.67□□□□□ -0.22
TRIM23-203ENST00000381018 TUBB4AP04350 444 aa13.67□□□□□ -0.22
TRIM23-203ENST00000381018 GYG1P46976 350 aa13.67□□□□□ -0.22
TRIM23-203ENST00000381018 KANK3Q6NY19 840 aa13.67□□□□□ -0.22
TRIM23-203ENST00000381018 MARCH10Q8NA82 808 aaPredicted RBP13.67□□□□□ -0.22
TRIM23-203ENST00000381018 DPF2Q92785 391 aa13.67□□□□□ -0.22
TRIM23-203ENST00000381018 FANCLQ9NW38 375 aa13.67□□□□□ -0.22
TRIM23-203ENST00000381018 DACH1Q9UI36 760 aa13.67□□□□□ -0.22
TRIM23-203ENST00000381018 KDM4FA0A1W2PPD8 638 aa13.66□□□□□ -0.22
TRIM23-203ENST00000381018 FOXN1O15353 648 aa13.66□□□□□ -0.22
TRIM23-203ENST00000381018 GRIN1Q05586 938 aa13.66□□□□□ -0.22
TRIM23-203ENST00000381018 CAVIN4Q5BKX8 364 aa13.66□□□□□ -0.22
TRIM23-203ENST00000381018 NT5DC1Q5TFE4 455 aa13.66□□□□□ -0.22
TRIM23-203ENST00000381018 CLEC4GQ6UXB4 293 aa13.66□□□□□ -0.22
TRIM23-203ENST00000381018 VSTM4Q8IW00 320 aa13.66□□□□□ -0.22
TRIM23-203ENST00000381018 OXER1Q8TDS5 423 aa13.66□□□□□ -0.22
TRIM23-203ENST00000381018 SMARCC1Q92922 1105 aaPredicted RBP13.66□□□□□ -0.22
TRIM23-203ENST00000381018 SMARCE1Q969G3 411 aa13.66□□□□□ -0.22
TRIM23-203ENST00000381018 ZSCAN10Q96SZ4 725 aaPredicted RBP13.66□□□□□ -0.22
TRIM23-203ENST00000381018 RIOK1Q9BRS2 568 aaKnown RBP13.66□□□□□ -0.22
TRIM23-203ENST00000381018 BRIP1Q9BX63 1249 aa13.66□□□□□ -0.22
TRIM23-203ENST00000381018 ZMYND15Q9H091 742 aa13.66□□□□□ -0.22
TRIM23-203ENST00000381018 MAN1B1Q9UKM7 699 aa13.66□□□□□ -0.22
TRIM23-203ENST00000381018 MAST2Q6P0Q8 1798 aa13.66□□□□□ -0.22
TRIM23-203ENST00000381018 TOP1P11387 765 aaKnown RBP13.65□□□□□ -0.22
TRIM23-203ENST00000381018 PCP11498 1178 aaKnown RBP13.65□□□□□ -0.22
TRIM23-203ENST00000381018 BMP6P22004 513 aa13.65□□□□□ -0.22
TRIM23-203ENST00000381018 PDE4BQ07343 736 aa13.65□□□□□ -0.22
TRIM23-203ENST00000381018 SF3B3Q15393 1217 aaKnown RBP13.65□□□□□ -0.22
TRIM23-203ENST00000381018 ERFEQ4G0M1 354 aa13.65□□□□□ -0.22
TRIM23-203ENST00000381018 CATIPQ7Z7H3 387 aa13.65□□□□□ -0.22
TRIM23-203ENST00000381018 ENAHQ8N8S7 591 aaPredicted RBP13.65□□□□□ -0.22
TRIM23-203ENST00000381018 TRIML1Q8N9V2 468 aa13.65□□□□□ -0.22
TRIM23-203ENST00000381018 MLKLQ8NB16 471 aa13.65□□□□□ -0.22
TRIM23-203ENST00000381018 ERO1AQ96HE7 468 aa13.65□□□□□ -0.22
TRIM23-203ENST00000381018 FEZ1Q99689 392 aa13.65□□□□□ -0.22
TRIM23-203ENST00000381018 CABP5Q9NP86 173 aa13.65□□□□□ -0.22
TRIM23-203ENST00000381018 RBM28Q9NW13 759 aaKnown RBP13.65□□□□□ -0.22
TRIM23-203ENST00000381018 BSDC1Q9NW68 430 aaPredicted RBP13.65□□□□□ -0.22
TRIM23-203ENST00000381018 SERTAD1Q9UHV2 236 aa13.65□□□□□ -0.22
TRIM23-203ENST00000381018 ZNF215Q9UL58 517 aaPredicted RBP13.65□□□□□ -0.22
TRIM23-203ENST00000381018 MORC2Q9Y6X9 1032 aaPredicted RBP13.65□□□□□ -0.22
TRIM23-203ENST00000381018 NAA30Q147X3 362 aaPredicted RBP13.65□□□□□ -0.22
TRIM23-203ENST00000381018 IFIT1BQ5T764 474 aaKnown RBP13.65□□□□□ -0.22
TRIM23-203ENST00000381018 TRIM75PA6NK02 468 aa13.64□□□□□ -0.23
TRIM23-203ENST00000381018 SLU7O95391 586 aaKnown RBP13.64□□□□□ -0.23
TRIM23-203ENST00000381018 ADAMTS2O95450 1211 aa13.64□□□□□ -0.23
TRIM23-203ENST00000381018 PRR29P0C7W0 189 aa13.64□□□□□ -0.23
TRIM23-203ENST00000381018 CALM1P0DP23 149 aa13.64□□□□□ -0.23
TRIM23-203ENST00000381018 CALM2P0DP24 149 aa13.64□□□□□ -0.23
TRIM23-203ENST00000381018 CALM3P0DP25 149 aa13.64□□□□□ -0.23
TRIM23-203ENST00000381018 KRT2P35908 639 aa13.64□□□□□ -0.23
TRIM23-203ENST00000381018 SARSP49591 514 aaKnown RBP13.64□□□□□ -0.23
TRIM23-203ENST00000381018 CBX1P83916 185 aa13.64□□□□□ -0.23
TRIM23-203ENST00000381018 MORC3Q14149 939 aa13.64□□□□□ -0.23
TRIM23-203ENST00000381018 IQCA1Q86XH1 822 aa13.64□□□□□ -0.23
TRIM23-203ENST00000381018 CCDC34Q96HJ3 373 aa13.64□□□□□ -0.23
TRIM23-203ENST00000381018 PHF20Q9BVI0 1012 aa13.64□□□□□ -0.23
TRIM23-203ENST00000381018 CSRNP2Q9H175 543 aa13.64□□□□□ -0.23
TRIM23-203ENST00000381018 TMEM232C9JQI7 657 aa13.63□□□□□ -0.23
TRIM23-203ENST00000381018 PRPF3O43395 683 aaKnown RBP13.63□□□□□ -0.23
TRIM23-203ENST00000381018 ACTN4O43707 911 aaKnown RBP13.63□□□□□ -0.23
TRIM23-203ENST00000381018 ATP2B1P20020 1258 aa13.63□□□□□ -0.23
TRIM23-203ENST00000381018 DYNLL1P63167 89 aaKnown RBP13.63□□□□□ -0.23
TRIM23-203ENST00000381018 PKN1Q16512 942 aa13.63□□□□□ -0.23
TRIM23-203ENST00000381018 SYT10Q6XYQ8 523 aa13.63□□□□□ -0.23
TRIM23-203ENST00000381018 ENOX1Q8TC92 643 aaKnown RBP13.63□□□□□ -0.23
TRIM23-203ENST00000381018 TMX1Q9H3N1 280 aa13.63□□□□□ -0.23
TRIM23-203ENST00000381018 AATFQ9NY61 560 aaKnown RBP eCLIP13.63□□□□□ -0.23
TRIM23-203ENST00000381018 VPS54Q9P1Q0 977 aa13.63□□□□□ -0.23
TRIM23-203ENST00000381018 MINPP1Q9UNW1 487 aa13.63□□□□□ -0.23
TRIM23-203ENST00000381018 SPATA31A5Q5VU36 1347 aa13.63□□□□□ -0.23
TRIM23-203ENST00000381018 SPATA31A7Q8IWB4 1347 aa13.63□□□□□ -0.23
TRIM23-203ENST00000381018 SMIM22K7EJ46 135 aa13.63□□□□□ -0.23
TRIM23-203ENST00000381018 SEMA3EO15041 775 aa13.63□□□□□ -0.23
TRIM23-203ENST00000381018 DDAH1O94760 285 aa13.63□□□□□ -0.23
TRIM23-203ENST00000381018 BMP15O95972 392 aa13.63□□□□□ -0.23
TRIM23-203ENST00000381018 FGRP09769 529 aa13.63□□□□□ -0.23
TRIM23-203ENST00000381018 FUT2Q10981 343 aa13.63□□□□□ -0.23
TRIM23-203ENST00000381018 C3orf67Q6ZVT6 689 aa13.63□□□□□ -0.23
TRIM23-203ENST00000381018 FCHSD1Q86WN1 690 aa13.63□□□□□ -0.23
TRIM23-203ENST00000381018 HOMER1Q86YM7 354 aa13.63□□□□□ -0.23
TRIM23-203ENST00000381018 PDILTQ8N807 584 aa13.63□□□□□ -0.23
TRIM23-203ENST00000381018 L2HGDHQ9H9P8 463 aa13.63□□□□□ -0.23
TRIM23-203ENST00000381018 BRMS1Q9HCU9 246 aa13.63□□□□□ -0.23
TRIM23-203ENST00000381018 NFE2L3Q9Y4A8 694 aa13.63□□□□□ -0.23
TRIM23-203ENST00000381018 KIAA1551Q9HCM1 1747 aa13.63□□□□□ -0.23
TRIM23-203ENST00000381018 CYP2D7A0A087X1C5 515 aa13.62□□□□□ -0.23
TRIM23-203ENST00000381018 SPDYE4A6NLX3 237 aa13.62□□□□□ -0.23
TRIM23-203ENST00000381018 NUTM2AQ8IVF1 878 aaPredicted RBP13.62□□□□□ -0.23
TRIM23-203ENST00000381018 ZNF397Q8NF99 534 aaPredicted RBP13.62□□□□□ -0.23
TRIM23-203ENST00000381018 SPATA20Q8TB22 786 aa13.62□□□□□ -0.23
TRIM23-203ENST00000381018 SHISA4Q96DD7 197 aa13.62□□□□□ -0.23
TRIM23-203ENST00000381018 FAM84BQ96KN1 310 aaPredicted RBP13.62□□□□□ -0.23
TRIM23-203ENST00000381018 INTS13Q9NVM9 706 aa13.62□□□□□ -0.23
TRIM23-203ENST00000381018 PHLPP2Q6ZVD8 1323 aa13.62□□□□□ -0.23
TRIM23-203ENST00000381018 COL24A1Q17RW2 1714 aa13.62□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms