RNA–Protein interactions for RNA: ENST00000380833.8

CLCN4-202, Transcript of chloride voltage-gated channel 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLCN4, Length 6,750 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN4-202ENST00000380833 DAPK3O43293 454 aa11.95□□□□□ -0.5
CLCN4-202ENST00000380833 PHBP35232 272 aa11.95□□□□□ -0.5
CLCN4-202ENST00000380833 C17orf53Q8N3J3 647 aaPredicted RBP11.95□□□□□ -0.5
CLCN4-202ENST00000380833 PRPF38AQ8NAV1 312 aaKnown RBP11.95□□□□□ -0.5
CLCN4-202ENST00000380833 KIFC2Q96AC6 838 aa11.95□□□□□ -0.5
CLCN4-202ENST00000380833 TSGA10Q9BZW7 698 aa11.95□□□□□ -0.5
CLCN4-202ENST00000380833 MSH6P52701 1360 aa11.94□□□□□ -0.5
CLCN4-202ENST00000380833 NCKAP5LQ9HCH0 1330 aa11.94□□□□□ -0.5
CLCN4-202ENST00000380833 RASSF10A6NK89 507 aa11.94□□□□□ -0.5
CLCN4-202ENST00000380833 KDM1AO60341 852 aa11.94□□□□□ -0.5
CLCN4-202ENST00000380833 LPXNO60711 386 aa11.94□□□□□ -0.5
CLCN4-202ENST00000380833 SNRPA1P09661 255 aaKnown RBP11.94□□□□□ -0.5
CLCN4-202ENST00000380833 IVNS1ABPQ9Y6Y0 642 aa11.94□□□□□ -0.5
CLCN4-202ENST00000380833 ZBTB43O43298 467 aa11.94□□□□□ -0.5
CLCN4-202ENST00000380833 UFL1O94874 794 aa11.94□□□□□ -0.5
CLCN4-202ENST00000380833 NEK2P51955 445 aa11.94□□□□□ -0.5
CLCN4-202ENST00000380833 LMBR1LQ6UX01 489 aa11.94□□□□□ -0.5
CLCN4-202ENST00000380833 TTC30AQ86WT1 665 aa11.94□□□□□ -0.5
CLCN4-202ENST00000380833 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP11.94□□□□□ -0.5
CLCN4-202ENST00000380833 NAPGQ99747 312 aaPredicted RBP11.94□□□□□ -0.5
CLCN4-202ENST00000380833 TXNDC16Q9P2K2 825 aa11.94□□□□□ -0.5
CLCN4-202ENST00000380833 KRT19P08727 400 aa11.94□□□□□ -0.5
CLCN4-202ENST00000380833 FAM98CQ17RN3 349 aaKnown RBP11.94□□□□□ -0.5
CLCN4-202ENST00000380833 BATF3Q9NR55 127 aa11.94□□□□□ -0.5
CLCN4-202ENST00000380833 LMTK3Q96Q04 1460 aa11.94□□□□□ -0.5
CLCN4-202ENST00000380833 hCG_2014768A0A024R1R8 64 aa11.94□□□□□ -0.5
CLCN4-202ENST00000380833 LMNB2Q03252 620 aa11.94□□□□□ -0.5
CLCN4-202ENST00000380833 TSTA3Q13630 321 aaPredicted RBP11.94□□□□□ -0.5
CLCN4-202ENST00000380833 EVI5LQ96CN4 794 aa11.94□□□□□ -0.5
CLCN4-202ENST00000380833 FGD4Q96M96 766 aa11.94□□□□□ -0.5
CLCN4-202ENST00000380833 LZTFL1Q9NQ48 299 aa11.94□□□□□ -0.5
CLCN4-202ENST00000380833 STK32BQ9NY57 414 aa11.94□□□□□ -0.5
CLCN4-202ENST00000380833 CTTNBP2NLQ9P2B4 639 aa11.94□□□□□ -0.5
CLCN4-202ENST00000380833 IGF1RP08069 1367 aa11.94□□□□□ -0.5
CLCN4-202ENST00000380833 KRT10P13645 584 aa11.94□□□□□ -0.5
CLCN4-202ENST00000380833 ZNF445P59923 1031 aa11.94□□□□□ -0.5
CLCN4-202ENST00000380833 TYRO3Q06418 890 aa11.94□□□□□ -0.5
CLCN4-202ENST00000380833 USP48Q86UV5 1035 aa11.94□□□□□ -0.5
CLCN4-202ENST00000380833 DDX17Q92841 729 aaKnown RBP11.94□□□□□ -0.5
CLCN4-202ENST00000380833 SPZ1Q9BXG8 430 aa11.94□□□□□ -0.5
CLCN4-202ENST00000380833 STK25O00506 426 aa11.94□□□□□ -0.5
CLCN4-202ENST00000380833 NOP14P78316 857 aaKnown RBP11.94□□□□□ -0.5
CLCN4-202ENST00000380833 NFATC2IPQ8NCF5 419 aa11.94□□□□□ -0.5
CLCN4-202ENST00000380833 FBXO2Q9UK22 296 aaPredicted RBP11.94□□□□□ -0.5
CLCN4-202ENST00000380833 ESRRGP62508 458 aa11.93□□□□□ -0.5
CLCN4-202ENST00000380833 IFT20Q8IY31 132 aa11.93□□□□□ -0.5
CLCN4-202ENST00000380833 RRP36Q96EU6 259 aaKnown RBP11.93□□□□□ -0.5
CLCN4-202ENST00000380833 AGTPBP1Q9UPW5 1226 aa11.93□□□□□ -0.5
CLCN4-202ENST00000380833 DHX29Q7Z478 1369 aaKnown RBP11.93□□□□□ -0.5
CLCN4-202ENST00000380833 MX2P20592 715 aa11.93□□□□□ -0.5
CLCN4-202ENST00000380833 SLC44A4Q53GD3 710 aa11.93□□□□□ -0.5
CLCN4-202ENST00000380833 EPSTI1Q96J88 318 aa11.93□□□□□ -0.5
CLCN4-202ENST00000380833 C16orf87Q6PH81 154 aa11.93□□□□□ -0.5
CLCN4-202ENST00000380833 AOPEPQ8N6M6 819 aa11.93□□□□□ -0.5
CLCN4-202ENST00000380833 ATP6V0A1Q93050 837 aa11.93□□□□□ -0.5
CLCN4-202ENST00000380833 SH3GL2Q99962 352 aa11.93□□□□□ -0.5
CLCN4-202ENST00000380833 SH2D4AQ9H788 454 aa11.93□□□□□ -0.5
CLCN4-202ENST00000380833 SPDYE16A6NNV3 312 aaPredicted RBP11.93□□□□□ -0.5
CLCN4-202ENST00000380833 SPDYE2Q495Y8 402 aa11.93□□□□□ -0.5
CLCN4-202ENST00000380833 Q6ZUG5 572 aa11.93□□□□□ -0.5
CLCN4-202ENST00000380833 SNX21Q969T3 373 aa11.93□□□□□ -0.5
CLCN4-202ENST00000380833 JAKMIP2Q96AA8 810 aa11.93□□□□□ -0.5
CLCN4-202ENST00000380833 RPGRIP1Q96KN7 1286 aa11.93□□□□□ -0.5
CLCN4-202ENST00000380833 DNAJC25Q9H1X3 360 aa11.93□□□□□ -0.5
CLCN4-202ENST00000380833 BTG4Q9NY30 223 aa11.93□□□□□ -0.5
CLCN4-202ENST00000380833 TBC1D7Q9P0N9 293 aa11.93□□□□□ -0.5
CLCN4-202ENST00000380833 FLOT1O75955 427 aa11.92□□□□□ -0.5
CLCN4-202ENST00000380833 TPP2P29144 1249 aaPredicted RBP11.92□□□□□ -0.5
CLCN4-202ENST00000380833 SYKP43405 635 aa11.92□□□□□ -0.5
CLCN4-202ENST00000380833 MYSM1Q5VVJ2 828 aa11.92□□□□□ -0.5
CLCN4-202ENST00000380833 DACT3Q96B18 629 aaPredicted RBP11.92□□□□□ -0.5
CLCN4-202ENST00000380833 OSBPL9Q96SU4 736 aa11.92□□□□□ -0.5
CLCN4-202ENST00000380833 ACEP12821 1306 aa11.92□□□□□ -0.5
CLCN4-202ENST00000380833 EFCAB8A8MWE9 144 aa11.92□□□□□ -0.5
CLCN4-202ENST00000380833 TRAPPC3LQ5T215 181 aa11.92□□□□□ -0.5
CLCN4-202ENST00000380833 ARHGAP27Q6ZUM4 889 aa11.92□□□□□ -0.5
CLCN4-202ENST00000380833 LARGE2Q8N3Y3 721 aa11.92□□□□□ -0.5
CLCN4-202ENST00000380833 CCT6BQ92526 530 aa11.92□□□□□ -0.5
CLCN4-202ENST00000380833 ZRANB1Q9UGI0 708 aa11.92□□□□□ -0.5
CLCN4-202ENST00000380833 TMEM232C9JQI7 657 aa11.92□□□□□ -0.5
CLCN4-202ENST00000380833 APOEP02649 317 aa11.92□□□□□ -0.5
CLCN4-202ENST00000380833 CCDC80Q76M96 950 aa11.92□□□□□ -0.5
CLCN4-202ENST00000380833 SMCR8Q8TEV9 937 aaPredicted RBP11.92□□□□□ -0.5
CLCN4-202ENST00000380833 RNF40O75150 1001 aa11.92□□□□□ -0.5
CLCN4-202ENST00000380833 BAG2O95816 211 aa11.92□□□□□ -0.5
CLCN4-202ENST00000380833 LDHBP07195 334 aaKnown RBP11.92□□□□□ -0.5
CLCN4-202ENST00000380833 CCDC122Q5T0U0 273 aa11.92□□□□□ -0.5
CLCN4-202ENST00000380833 MIS12Q9H081 205 aa11.92□□□□□ -0.5
CLCN4-202ENST00000380833 FAM204AQ9H8W3 233 aa11.92□□□□□ -0.5
CLCN4-202ENST00000380833 ECHDC1Q9NTX5 307 aa11.92□□□□□ -0.5
CLCN4-202ENST00000380833 ETAA1Q9NY74 926 aa11.92□□□□□ -0.5
CLCN4-202ENST00000380833 WASLO00401 505 aaPredicted RBP11.92□□□□□ -0.5
CLCN4-202ENST00000380833 Q3C1V9 767 aa11.92□□□□□ -0.5
CLCN4-202ENST00000380833 PPME1Q9Y570 386 aa11.92□□□□□ -0.5
CLCN4-202ENST00000380833 APBA3O96018 575 aa11.91□□□□□ -0.5
CLCN4-202ENST00000380833 TRIM60Q495X7 471 aa11.91□□□□□ -0.5
CLCN4-202ENST00000380833 CADPS2Q86UW7 1296 aa11.91□□□□□ -0.5
CLCN4-202ENST00000380833 SESTD1Q86VW0 696 aa11.91□□□□□ -0.5
CLCN4-202ENST00000380833 ESR2Q92731 530 aa11.91□□□□□ -0.5
CLCN4-202ENST00000380833 PLVAPQ9BX97 442 aa11.91□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms