RNA–Protein interactions for RNA: ENST00000380748.5

HMGN1-203, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 3 BASIC

Gene HMGN1, Length 829 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-203ENST00000380748 ATN1P54259 1190 aaPredicted RBP21.48■■□□□ 1.03
HMGN1-203ENST00000380748 ERVK-9P63128 1117 aa21.48■■□□□ 1.03
HMGN1-203ENST00000380748 ERVK-24P63145 666 aa21.48■■□□□ 1.03
HMGN1-203ENST00000380748 SHROOM1Q2M3G4 852 aaPredicted RBP21.48■■□□□ 1.03
HMGN1-203ENST00000380748 POTEEQ6S8J3 1075 aa21.48■■□□□ 1.03
HMGN1-203ENST00000380748 PLEKHH3Q7Z736 793 aa21.48■■□□□ 1.03
HMGN1-203ENST00000380748 PAGR1Q9BTK6 254 aa21.48■■□□□ 1.03
HMGN1-203ENST00000380748 HERC5Q9UII4 1024 aaKnown RBP21.48■■□□□ 1.03
HMGN1-203ENST00000380748 UBTFL1P0CB47 393 aaPredicted RBP21.47■■□□□ 1.03
HMGN1-203ENST00000380748 PI16Q6UXB8 463 aa21.47■■□□□ 1.03
HMGN1-203ENST00000380748 CCAR1Q8IX12 1150 aaKnown RBP21.47■■□□□ 1.03
HMGN1-203ENST00000380748 NSUN4Q96CB9 384 aaKnown RBP21.47■■□□□ 1.03
HMGN1-203ENST00000380748 A0A1B0GUL7 405 aa21.46■■□□□ 1.03
HMGN1-203ENST00000380748 MAP4K4O95819 1239 aaPredicted RBP21.46■■□□□ 1.03
HMGN1-203ENST00000380748 TBC1D9Q6ZT07 1266 aa21.46■■□□□ 1.03
HMGN1-203ENST00000380748 TEX11Q8IYF3 940 aa21.46■■□□□ 1.03
HMGN1-203ENST00000380748 XAGE2Q96GT9 111 aa21.46■■□□□ 1.03
HMGN1-203ENST00000380748 SEMA6BQ9H3T3 888 aa21.46■■□□□ 1.03
HMGN1-203ENST00000380748 MUC3AQ02505 3323 aa21.45■■□□□ 1.03
HMGN1-203ENST00000380748 ASNSP08243 561 aa21.45■■□□□ 1.02
HMGN1-203ENST00000380748 GSTO1P78417 241 aa21.45■■□□□ 1.02
HMGN1-203ENST00000380748 SHHQ15465 462 aa21.45■■□□□ 1.02
HMGN1-203ENST00000380748 SH3RF3Q8TEJ3 882 aaPredicted RBP21.45■■□□□ 1.02
HMGN1-203ENST00000380748 DNAJC18Q9H819 358 aa21.45■■□□□ 1.02
HMGN1-203ENST00000380748 COPRSQ9NQ92 184 aa21.45■■□□□ 1.02
HMGN1-203ENST00000380748 FLRT1Q9NZU1 646 aa21.45■■□□□ 1.02
HMGN1-203ENST00000380748 HMG20BQ9P0W2 317 aa21.45■■□□□ 1.02
HMGN1-203ENST00000380748 NDUFB9Q9Y6M9 179 aa21.45■■□□□ 1.02
HMGN1-203ENST00000380748 C19orf81C9J6K1 198 aa21.44■■□□□ 1.02
HMGN1-203ENST00000380748 LDHCP07864 332 aa21.44■■□□□ 1.02
HMGN1-203ENST00000380748 MAP2K5Q13163 448 aa21.44■■□□□ 1.02
HMGN1-203ENST00000380748 C9orf50Q5SZB4 431 aa21.44■■□□□ 1.02
HMGN1-203ENST00000380748 MYLIPQ8WY64 445 aa21.44■■□□□ 1.02
HMGN1-203ENST00000380748 PI4KBQ9UBF8 816 aa21.44■■□□□ 1.02
HMGN1-203ENST00000380748 DDX20Q9UHI6 824 aaKnown RBP21.44■■□□□ 1.02
HMGN1-203ENST00000380748 USP17L10C9JJH3 530 aa21.43■■□□□ 1.02
HMGN1-203ENST00000380748 GDF11O95390 407 aa21.43■■□□□ 1.02
HMGN1-203ENST00000380748 RTP1P59025 263 aa21.43■■□□□ 1.02
HMGN1-203ENST00000380748 MVPQ14764 893 aaKnown RBP21.43■■□□□ 1.02
HMGN1-203ENST00000380748 CWC22Q9HCG8 908 aaKnown RBP21.43■■□□□ 1.02
HMGN1-203ENST00000380748 RAI14Q9P0K7 980 aa21.43■■□□□ 1.02
HMGN1-203ENST00000380748 PRKAG2Q9UGJ0 569 aa21.43■■□□□ 1.02
HMGN1-203ENST00000380748 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP21.43■■□□□ 1.02
HMGN1-203ENST00000380748 ZNF521Q96K83 1311 aa21.43■■□□□ 1.02
HMGN1-203ENST00000380748 TFCP2Q12800 502 aa21.42■■□□□ 1.02
HMGN1-203ENST00000380748 MFSD14CQ5VZR4 134 aa21.42■■□□□ 1.02
HMGN1-203ENST00000380748 SPATA5Q8NB90 893 aa21.42■■□□□ 1.02
HMGN1-203ENST00000380748 GTF3C2Q8WUA4 911 aaPredicted RBP21.42■■□□□ 1.02
HMGN1-203ENST00000380748 EDC3Q96F86 508 aaKnown RBP21.42■■□□□ 1.02
HMGN1-203ENST00000380748 TTYH1Q9H313 450 aaPredicted RBP21.42■■□□□ 1.02
HMGN1-203ENST00000380748 CNMDO75829 334 aa21.41■■□□□ 1.02
HMGN1-203ENST00000380748 CNGA1P29973 690 aa21.41■■□□□ 1.02
HMGN1-203ENST00000380748 LPAR1Q92633 364 aa21.41■■□□□ 1.02
HMGN1-203ENST00000380748 EMILIN3Q9NT22 766 aa21.41■■□□□ 1.02
HMGN1-203ENST00000380748 ATP11BQ9Y2G3 1177 aa21.41■■□□□ 1.02
HMGN1-203ENST00000380748 DNM1LO00429 736 aa21.4■■□□□ 1.02
HMGN1-203ENST00000380748 WDR78Q5VTH9 848 aa21.4■■□□□ 1.02
HMGN1-203ENST00000380748 DHX36Q9H2U1 1008 aaKnown RBP21.4■■□□□ 1.02
HMGN1-203ENST00000380748 ZBTB21Q9ULJ3 1066 aa21.4■■□□□ 1.02
HMGN1-203ENST00000380748 RLFQ13129 1914 aa21.39■■□□□ 1.02
HMGN1-203ENST00000380748 FOSL2P15408 326 aa21.39■■□□□ 1.01
HMGN1-203ENST00000380748 METTL16Q86W50 562 aaKnown RBP21.39■■□□□ 1.01
HMGN1-203ENST00000380748 MAPKAPK5Q8IW41 473 aa21.39■■□□□ 1.01
HMGN1-203ENST00000380748 TRPV1Q8NER1 839 aa21.39■■□□□ 1.01
HMGN1-203ENST00000380748 NEUROD6Q96NK8 337 aa21.39■■□□□ 1.01
HMGN1-203ENST00000380748 PRDM5Q9NQX1 630 aaPredicted RBP21.39■■□□□ 1.01
HMGN1-203ENST00000380748 AKAP2Q9Y2D5 859 aa21.39■■□□□ 1.01
HMGN1-203ENST00000380748 RABGAP1Q9Y3P9 1069 aa21.39■■□□□ 1.01
HMGN1-203ENST00000380748 MSCO60682 206 aa21.38■■□□□ 1.01
HMGN1-203ENST00000380748 CYP2C19P33261 490 aa21.38■■□□□ 1.01
HMGN1-203ENST00000380748 GJC2Q5T442 439 aaPredicted RBP21.38■■□□□ 1.01
HMGN1-203ENST00000380748 USP17L2Q6R6M4 530 aa21.38■■□□□ 1.01
HMGN1-203ENST00000380748 CRACR2BQ8N4Y2 399 aaPredicted RBP21.38■■□□□ 1.01
HMGN1-203ENST00000380748 NPLOC4Q8TAT6 608 aa21.38■■□□□ 1.01
HMGN1-203ENST00000380748 TGFBRAP1Q8WUH2 860 aa21.38■■□□□ 1.01
HMGN1-203ENST00000380748 AATFQ9NY61 560 aaKnown RBP eCLIP21.38■■□□□ 1.01
HMGN1-203ENST00000380748 CDK5RAP2Q96SN8 1893 aa21.38■■□□□ 1.01
HMGN1-203ENST00000380748 FLT1P17948 1338 aa21.37■■□□□ 1.01
HMGN1-203ENST00000380748 SLC15A5A6NIM6 579 aa21.37■■□□□ 1.01
HMGN1-203ENST00000380748 GLRX3O76003 335 aaKnown RBP21.37■■□□□ 1.01
HMGN1-203ENST00000380748 PTPREP23469 700 aa21.37■■□□□ 1.01
HMGN1-203ENST00000380748 SMAD3P84022 425 aaKnown RBP21.37■■□□□ 1.01
HMGN1-203ENST00000380748 ATP2B2Q01814 1243 aa21.37■■□□□ 1.01
HMGN1-203ENST00000380748 ZYXQ15942 572 aaKnown RBP21.37■■□□□ 1.01
HMGN1-203ENST00000380748 FAM9BQ8IZU0 186 aa21.37■■□□□ 1.01
HMGN1-203ENST00000380748 BADQ92934 168 aa21.37■■□□□ 1.01
HMGN1-203ENST00000380748 NOL10Q9BSC4 688 aaKnown RBP21.37■■□□□ 1.01
HMGN1-203ENST00000380748 TRIM34Q9BYJ4 488 aa21.37■■□□□ 1.01
HMGN1-203ENST00000380748 LRP2BPQ9P2M1 347 aa21.37■■□□□ 1.01
HMGN1-203ENST00000380748 PALD1Q9ULE6 856 aa21.37■■□□□ 1.01
HMGN1-203ENST00000380748 ARID4AP29374 1257 aaPredicted RBP21.36■■□□□ 1.01
HMGN1-203ENST00000380748 MCAMP43121 646 aa21.36■■□□□ 1.01
HMGN1-203ENST00000380748 CCNA1P78396 465 aa21.36■■□□□ 1.01
HMGN1-203ENST00000380748 SLC39A5Q6ZMH5 540 aa21.36■■□□□ 1.01
HMGN1-203ENST00000380748 FOXP4Q8IVH2 680 aaPredicted RBP21.36■■□□□ 1.01
HMGN1-203ENST00000380748 MEIS3Q99687 375 aa21.36■■□□□ 1.01
HMGN1-203ENST00000380748 SMC4Q9NTJ3 1288 aa21.36■■□□□ 1.01
HMGN1-203ENST00000380748 GINM1Q9NU53 330 aa21.36■■□□□ 1.01
HMGN1-203ENST00000380748 FOCADQ5VW36 1801 aa21.36■■□□□ 1.01
HMGN1-203ENST00000380748 HOXC6P09630 235 aa21.35■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms