RNA–Protein interactions for RNA: ENST00000380654.8

EBF1-202, Transcript of early B cell factor 1, humanhuman

TSL 1 (best) BASIC

Gene EBF1, Length 2,345 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EBF1-202ENST00000380654 PTPN14Q15678 1187 aa23.04■■□□□ 1.28
EBF1-202ENST00000380654 RILPL1Q5EBL4 403 aa23.04■■□□□ 1.28
EBF1-202ENST00000380654 VPS54Q9P1Q0 977 aa23.04■■□□□ 1.28
EBF1-202ENST00000380654 SCN7AQ01118 1682 aa23.04■■□□□ 1.28
EBF1-202ENST00000380654 DUOX1Q9NRD9 1551 aa23.04■■□□□ 1.28
EBF1-202ENST00000380654 POLR2DO15514 142 aaKnown RBP23.04■■□□□ 1.28
EBF1-202ENST00000380654 MYL5Q02045 173 aa23.04■■□□□ 1.28
EBF1-202ENST00000380654 NAA30Q147X3 362 aaPredicted RBP23.04■■□□□ 1.28
EBF1-202ENST00000380654 ZSCAN10Q96SZ4 725 aaPredicted RBP23.04■■□□□ 1.28
EBF1-202ENST00000380654 PAXBP1Q9Y5B6 917 aa23.04■■□□□ 1.28
EBF1-202ENST00000380654 PRR29P0C7W0 189 aa23.03■■□□□ 1.28
EBF1-202ENST00000380654 USP49Q70CQ1 688 aa23.03■■□□□ 1.28
EBF1-202ENST00000380654 GRAMD1CQ8IYS0 662 aa23.03■■□□□ 1.28
EBF1-202ENST00000380654 MYH13Q9UKX3 1938 aa23.03■■□□□ 1.28
EBF1-202ENST00000380654 PLEKHA8P1O95397 391 aa23.03■■□□□ 1.28
EBF1-202ENST00000380654 PKN1Q16512 942 aa23.03■■□□□ 1.28
EBF1-202ENST00000380654 FAM98CQ17RN3 349 aaKnown RBP23.03■■□□□ 1.28
EBF1-202ENST00000380654 HSP90AA4PQ58FG1 418 aa23.03■■□□□ 1.28
EBF1-202ENST00000380654 EARS2Q5JPH6 523 aaKnown RBP23.03■■□□□ 1.28
EBF1-202ENST00000380654 BARGINQ6ZT62 677 aa23.03■■□□□ 1.28
EBF1-202ENST00000380654 PDILTQ8N807 584 aa23.03■■□□□ 1.28
EBF1-202ENST00000380654 CCDC112Q8NEF3 446 aa23.03■■□□□ 1.28
EBF1-202ENST00000380654 SERTAD1Q9UHV2 236 aa23.03■■□□□ 1.28
EBF1-202ENST00000380654 RCAN1P53805 252 aa23.02■■□□□ 1.28
EBF1-202ENST00000380654 E4F1Q66K89 784 aaPredicted RBP23.02■■□□□ 1.28
EBF1-202ENST00000380654 ANKRD7Q92527 254 aa23.02■■□□□ 1.28
EBF1-202ENST00000380654 FANCLQ9NW38 375 aa23.02■■□□□ 1.28
EBF1-202ENST00000380654 BAZ2BQ9UIF8 2168 aaKnown RBP23.02■■□□□ 1.28
EBF1-202ENST00000380654 SFPQP23246 707 aaKnown RBP eCLIP23.02■■□□□ 1.28
EBF1-202ENST00000380654 NCBP1Q09161 790 aaKnown RBP23.02■■□□□ 1.28
EBF1-202ENST00000380654 IFIT1BQ5T764 474 aaKnown RBP23.02■■□□□ 1.28
EBF1-202ENST00000380654 CTR9Q6PD62 1173 aa23.02■■□□□ 1.28
EBF1-202ENST00000380654 RNF26Q9BY78 433 aaPredicted RBP23.02■■□□□ 1.28
EBF1-202ENST00000380654 TFCP2L1Q9NZI6 479 aa23.02■■□□□ 1.28
EBF1-202ENST00000380654 SRP68Q9UHB9 627 aaKnown RBP23.02■■□□□ 1.28
EBF1-202ENST00000380654 SERPINC1P01008 464 aa23.01■■□□□ 1.27
EBF1-202ENST00000380654 UBASH3AP57075 661 aa23.01■■□□□ 1.27
EBF1-202ENST00000380654 FUT2Q10981 343 aa23.01■■□□□ 1.27
EBF1-202ENST00000380654 OLFM4Q6UX06 510 aa23.01■■□□□ 1.27
EBF1-202ENST00000380654 CCDC150Q8NCX0 1101 aa23.01■■□□□ 1.27
EBF1-202ENST00000380654 USP17L12C9JPN9 530 aa23■■□□□ 1.27
EBF1-202ENST00000380654 USP17L21D6R901 530 aa23■■□□□ 1.27
EBF1-202ENST00000380654 POSTNQ15063 836 aa23■■□□□ 1.27
EBF1-202ENST00000380654 ZNF827Q17R98 1081 aa23■■□□□ 1.27
EBF1-202ENST00000380654 BRIP1Q9BX63 1249 aa23■■□□□ 1.27
EBF1-202ENST00000380654 MAN1B1Q9UKM7 699 aa23■■□□□ 1.27
EBF1-202ENST00000380654 NMT2O60551 498 aa23■■□□□ 1.27
EBF1-202ENST00000380654 NSUN4Q96CB9 384 aaKnown RBP23■■□□□ 1.27
EBF1-202ENST00000380654 CCDC94Q9BW85 323 aaPredicted RBP23■■□□□ 1.27
EBF1-202ENST00000380654 CSRNP2Q9H175 543 aa23■■□□□ 1.27
EBF1-202ENST00000380654 JAG2Q9Y219 1238 aa23■■□□□ 1.27
EBF1-202ENST00000380654 V9GY48 417 aaPredicted RBP23■■□□□ 1.27
EBF1-202ENST00000380654 TMEM232C9JQI7 657 aa22.99■■□□□ 1.27
EBF1-202ENST00000380654 WNT7AO00755 349 aa22.99■■□□□ 1.27
EBF1-202ENST00000380654 AKAP17AQ02040 695 aaKnown RBP22.99■■□□□ 1.27
EBF1-202ENST00000380654 MECOMQ03112 1051 aa22.99■■□□□ 1.27
EBF1-202ENST00000380654 CFAP100Q494V2 611 aa22.99■■□□□ 1.27
EBF1-202ENST00000380654 FBXO33Q7Z6M2 555 aa22.99■■□□□ 1.27
EBF1-202ENST00000380654 AATFQ9NY61 560 aaKnown RBP eCLIP22.99■■□□□ 1.27
EBF1-202ENST00000380654 SRPRBQ9Y5M8 271 aaKnown RBP22.99■■□□□ 1.27
EBF1-202ENST00000380654 NOM1Q5C9Z4 860 aaKnown RBP22.99■■□□□ 1.27
EBF1-202ENST00000380654 PDCL2Q8N4E4 241 aa22.99■■□□□ 1.27
EBF1-202ENST00000380654 GOLGA8FQ08AF8 430 aa22.98■■□□□ 1.27
EBF1-202ENST00000380654 GOLGA8DPQ0D2H9 430 aa22.98■■□□□ 1.27
EBF1-202ENST00000380654 TROAPQ12815 778 aa22.98■■□□□ 1.27
EBF1-202ENST00000380654 PPP4R3BQ5MIZ7 849 aa22.98■■□□□ 1.27
EBF1-202ENST00000380654 CATIPQ7Z7H3 387 aa22.98■■□□□ 1.27
EBF1-202ENST00000380654 KCND1Q9NSA2 647 aa22.98■■□□□ 1.27
EBF1-202ENST00000380654 PRDX5P30044 214 aa22.98■■□□□ 1.27
EBF1-202ENST00000380654 RPS8P62241 208 aaKnown RBP22.97■■□□□ 1.27
EBF1-202ENST00000380654 FMR1Q06787 632 aaKnown RBP eCLIP22.97■■□□□ 1.27
EBF1-202ENST00000380654 SLC4A8Q2Y0W8 1093 aa22.97■■□□□ 1.27
EBF1-202ENST00000380654 SLC51AQ86UW1 340 aa22.97■■□□□ 1.27
EBF1-202ENST00000380654 IQCA1Q86XH1 822 aa22.97■■□□□ 1.27
EBF1-202ENST00000380654 PHF20Q9BVI0 1012 aa22.97■■□□□ 1.27
EBF1-202ENST00000380654 ACTN4O43707 911 aaKnown RBP22.97■■□□□ 1.27
EBF1-202ENST00000380654 FAM47AQ5JRC9 791 aa22.97■■□□□ 1.27
EBF1-202ENST00000380654 SLC10A5Q5PT55 438 aa22.97■■□□□ 1.27
EBF1-202ENST00000380654 PPP1R13BQ96KQ4 1090 aa22.97■■□□□ 1.27
EBF1-202ENST00000380654 INTS13Q9NVM9 706 aa22.97■■□□□ 1.27
EBF1-202ENST00000380654 A0A087X0B3 334 aa22.96■■□□□ 1.27
EBF1-202ENST00000380654 FGRP09769 529 aa22.96■■□□□ 1.27
EBF1-202ENST00000380654 CYP2D6P10635 497 aa22.96■■□□□ 1.27
EBF1-202ENST00000380654 TXNRD3Q86VQ6 643 aa22.96■■□□□ 1.27
EBF1-202ENST00000380654 TRMT44Q8IYL2 757 aaKnown RBP22.96■■□□□ 1.27
EBF1-202ENST00000380654 ZNF579Q8NAF0 562 aaKnown RBP22.96■■□□□ 1.27
EBF1-202ENST00000380654 PRPF3O43395 683 aaKnown RBP22.96■■□□□ 1.27
EBF1-202ENST00000380654 KRT2P35908 639 aa22.96■■□□□ 1.27
EBF1-202ENST00000380654 EPSTI1Q96J88 318 aa22.96■■□□□ 1.27
EBF1-202ENST00000380654 DCP1AQ9NPI6 582 aaPredicted RBP22.96■■□□□ 1.27
EBF1-202ENST00000380654 HOOK1Q9UJC3 728 aaKnown RBP22.96■■□□□ 1.27
EBF1-202ENST00000380654 CEP131Q9UPN4 1083 aa22.96■■□□□ 1.27
EBF1-202ENST00000380654 SARSP49591 514 aaKnown RBP22.95■■□□□ 1.26
EBF1-202ENST00000380654 PPP2R5BQ15173 497 aa22.95■■□□□ 1.26
EBF1-202ENST00000380654 ELOA2Q8IYF1 753 aaPredicted RBP22.95■■□□□ 1.26
EBF1-202ENST00000380654 SMARCE1Q969G3 411 aa22.95■■□□□ 1.26
EBF1-202ENST00000380654 DLEC1Q9Y238 1755 aa22.95■■□□□ 1.26
EBF1-202ENST00000380654 TRIM75PA6NK02 468 aa22.94■■□□□ 1.26
EBF1-202ENST00000380654 XBP1P17861 261 aa22.94■■□□□ 1.26
EBF1-202ENST00000380654 HIBADHP31937 336 aaKnown RBP22.94■■□□□ 1.26
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms