RNA–Protein interactions for RNA: ENST00000380340.8

APH1B-202, Transcript of aph-1 homolog B, gamma-secretase subunit, humanhuman

TSL 2

Gene APH1B, Length 872 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APH1B-202ENST00000380340 CHD9Q3L8U1 2897 aa12.88□□□□□ -0.35
APH1B-202ENST00000380340 DOCK2Q92608 1830 aa12.88□□□□□ -0.35
APH1B-202ENST00000380340 SALL1Q9NSC2 1324 aa12.88□□□□□ -0.35
APH1B-202ENST00000380340 RFX7Q2KHR2 1363 aa12.87□□□□□ -0.35
APH1B-202ENST00000380340 TRIM43BA6NCK2 446 aa12.87□□□□□ -0.35
APH1B-202ENST00000380340 KBTBD13C9JR72 458 aa12.87□□□□□ -0.35
APH1B-202ENST00000380340 PEX10O60683 326 aa12.87□□□□□ -0.35
APH1B-202ENST00000380340 SLC5A1P13866 664 aa12.87□□□□□ -0.35
APH1B-202ENST00000380340 CAP2P40123 477 aa12.87□□□□□ -0.35
APH1B-202ENST00000380340 ERVK-9P63128 1117 aa12.87□□□□□ -0.35
APH1B-202ENST00000380340 ERVK-24P63145 666 aa12.87□□□□□ -0.35
APH1B-202ENST00000380340 PICALMQ13492 652 aa12.87□□□□□ -0.35
APH1B-202ENST00000380340 SNX17Q15036 470 aa12.87□□□□□ -0.35
APH1B-202ENST00000380340 TRIM60Q495X7 471 aa12.87□□□□□ -0.35
APH1B-202ENST00000380340 SLF2Q8IX21 1173 aa12.87□□□□□ -0.35
APH1B-202ENST00000380340 LPIN2Q92539 896 aa12.87□□□□□ -0.35
APH1B-202ENST00000380340 TRIM43Q96BQ3 446 aaPredicted RBP12.87□□□□□ -0.35
APH1B-202ENST00000380340 TIFAQ96CG3 184 aa12.87□□□□□ -0.35
APH1B-202ENST00000380340 KAZALD1Q96I82 304 aa12.87□□□□□ -0.35
APH1B-202ENST00000380340 SUCLG2Q96I99 432 aa12.87□□□□□ -0.35
APH1B-202ENST00000380340 WDR18Q9BV38 432 aa12.87□□□□□ -0.35
APH1B-202ENST00000380340 PORCNQ9H237 461 aa12.87□□□□□ -0.35
APH1B-202ENST00000380340 GAKO14976 1311 aa12.87□□□□□ -0.35
APH1B-202ENST00000380340 LOC285556D6RIA3 1793 aa12.86□□□□□ -0.35
APH1B-202ENST00000380340 BACE1P56817 501 aa12.86□□□□□ -0.35
APH1B-202ENST00000380340 ATP2B2Q01814 1243 aa12.86□□□□□ -0.35
APH1B-202ENST00000380340 Q3C1V9 767 aa12.86□□□□□ -0.35
APH1B-202ENST00000380340 RABL6Q3YEC7 729 aaPredicted RBP12.86□□□□□ -0.35
APH1B-202ENST00000380340 GJC2Q5T442 439 aaPredicted RBP12.86□□□□□ -0.35
APH1B-202ENST00000380340 C1orf53Q5VUE5 145 aa12.86□□□□□ -0.35
APH1B-202ENST00000380340 POTEEQ6S8J3 1075 aa12.86□□□□□ -0.35
APH1B-202ENST00000380340 SH3RF1Q7Z6J0 888 aa12.86□□□□□ -0.35
APH1B-202ENST00000380340 DDX4Q9NQI0 724 aaKnown RBP12.86□□□□□ -0.35
APH1B-202ENST00000380340 TACC3Q9Y6A5 838 aa12.86□□□□□ -0.35
APH1B-202ENST00000380340 FAM196BA6NMK8 535 aa12.85□□□□□ -0.35
APH1B-202ENST00000380340 EPHB4P54760 987 aa12.85□□□□□ -0.35
APH1B-202ENST00000380340 MTMR2Q13614 643 aa12.85□□□□□ -0.35
APH1B-202ENST00000380340 ZGPATQ8N5A5 531 aaKnown RBP12.85□□□□□ -0.35
APH1B-202ENST00000380340 FAM163AQ96GL9 167 aaPredicted RBP12.85□□□□□ -0.35
APH1B-202ENST00000380340 LRFN3Q9BTN0 628 aa12.85□□□□□ -0.35
APH1B-202ENST00000380340 SRCIN1Q9C0H9 1055 aa12.85□□□□□ -0.35
APH1B-202ENST00000380340 TSPYL2Q9H2G4 693 aaPredicted RBP12.85□□□□□ -0.35
APH1B-202ENST00000380340 BICC1Q9H694 974 aaKnown RBP12.85□□□□□ -0.35
APH1B-202ENST00000380340 FLRT1Q9NZU1 646 aa12.85□□□□□ -0.35
APH1B-202ENST00000380340 DENND2AQ9ULE3 1009 aa12.85□□□□□ -0.35
APH1B-202ENST00000380340 SLC15A5A6NIM6 579 aa12.84□□□□□ -0.35
APH1B-202ENST00000380340 C19orf81C9J6K1 198 aa12.84□□□□□ -0.35
APH1B-202ENST00000380340 SEMA3EO15041 775 aa12.84□□□□□ -0.35
APH1B-202ENST00000380340 HOXC6P09630 235 aa12.84□□□□□ -0.35
APH1B-202ENST00000380340 NBPF7P0C2Y1 421 aaPredicted RBP12.84□□□□□ -0.35
APH1B-202ENST00000380340 CCNA1P78396 465 aa12.84□□□□□ -0.35
APH1B-202ENST00000380340 TLE2Q04725 743 aa12.84□□□□□ -0.35
APH1B-202ENST00000380340 FPGSQ05932 587 aa12.84□□□□□ -0.35
APH1B-202ENST00000380340 DZIP1Q86YF9 867 aaKnown RBP12.84□□□□□ -0.35
APH1B-202ENST00000380340 PAGR1Q9BTK6 254 aa12.84□□□□□ -0.35
APH1B-202ENST00000380340 XIRP2A4UGR9 3374 aa12.83□□□□□ -0.36
APH1B-202ENST00000380340 KIAA0355O15063 1070 aa12.83□□□□□ -0.36
APH1B-202ENST00000380340 VAMP4O75379 141 aa12.83□□□□□ -0.36
APH1B-202ENST00000380340 BMP1P13497 986 aa12.83□□□□□ -0.36
APH1B-202ENST00000380340 RAG1P15918 1043 aa12.83□□□□□ -0.36
APH1B-202ENST00000380340 CYP2C19P33261 490 aa12.83□□□□□ -0.36
APH1B-202ENST00000380340 ADCYAP1R1P41586 468 aa12.83□□□□□ -0.36
APH1B-202ENST00000380340 BTDP43251 543 aa12.83□□□□□ -0.36
APH1B-202ENST00000380340 CCDC85BQ15834 202 aaPredicted RBP12.83□□□□□ -0.36
APH1B-202ENST00000380340 SLC4A10Q6U841 1118 aa12.83□□□□□ -0.36
APH1B-202ENST00000380340 TRPV1Q8NER1 839 aa12.83□□□□□ -0.36
APH1B-202ENST00000380340 PRDM12Q9H4Q4 367 aa12.83□□□□□ -0.36
APH1B-202ENST00000380340 CXXC1Q9P0U4 656 aaPredicted RBP12.83□□□□□ -0.36
APH1B-202ENST00000380340 RABGAP1Q9Y3P9 1069 aa12.83□□□□□ -0.36
APH1B-202ENST00000380340 MAP4K4O95819 1239 aaPredicted RBP12.82□□□□□ -0.36
APH1B-202ENST00000380340 ASNSP08243 561 aa12.82□□□□□ -0.36
APH1B-202ENST00000380340 CLTBP09497 229 aa12.82□□□□□ -0.36
APH1B-202ENST00000380340 PTPREP23469 700 aa12.82□□□□□ -0.36
APH1B-202ENST00000380340 ITGB8P26012 769 aa12.82□□□□□ -0.36
APH1B-202ENST00000380340 RRP1BQ14684 758 aaKnown RBP12.82□□□□□ -0.36
APH1B-202ENST00000380340 AAK1Q2M2I8 961 aa12.82□□□□□ -0.36
APH1B-202ENST00000380340 TMEM31Q5JXX7 168 aa12.82□□□□□ -0.36
APH1B-202ENST00000380340 SPTY2D1Q68D10 685 aaPredicted RBP12.82□□□□□ -0.36
APH1B-202ENST00000380340 ANKRD44Q8N8A2 993 aa12.82□□□□□ -0.36
APH1B-202ENST00000380340 KLHDC4Q8TBB5 520 aa12.82□□□□□ -0.36
APH1B-202ENST00000380340 SNX27Q96L92 541 aa12.82□□□□□ -0.36
APH1B-202ENST00000380340 NECAB3Q96P71 396 aaPredicted RBP12.82□□□□□ -0.36
APH1B-202ENST00000380340 HERC5Q9UII4 1024 aaKnown RBP12.82□□□□□ -0.36
APH1B-202ENST00000380340 IVNS1ABPQ9Y6Y0 642 aa12.82□□□□□ -0.36
APH1B-202ENST00000380340 IL16Q14005 1332 aa12.82□□□□□ -0.36
APH1B-202ENST00000380340 FRMPD3Q5JV73 1810 aa12.81□□□□□ -0.36
APH1B-202ENST00000380340 USP17L10C9JJH3 530 aa12.81□□□□□ -0.36
APH1B-202ENST00000380340 EYA2O00167 538 aa12.81□□□□□ -0.36
APH1B-202ENST00000380340 CYBAP13498 195 aa12.81□□□□□ -0.36
APH1B-202ENST00000380340 CCDC27Q2M243 656 aa12.81□□□□□ -0.36
APH1B-202ENST00000380340 WDR78Q5VTH9 848 aa12.81□□□□□ -0.36
APH1B-202ENST00000380340 ALYREFQ86V81 257 aaKnown RBP12.81□□□□□ -0.36
APH1B-202ENST00000380340 FERMT2Q96AC1 680 aa12.81□□□□□ -0.36
APH1B-202ENST00000380340 NDUFB9Q9Y6M9 179 aa12.81□□□□□ -0.36
APH1B-202ENST00000380340 RLFQ13129 1914 aa12.8□□□□□ -0.36
APH1B-202ENST00000380340 CACNA1FO60840 1977 aa12.8□□□□□ -0.36
APH1B-202ENST00000380340 GPR75-ASB3A0A0A6YYF3 556 aa12.8□□□□□ -0.36
APH1B-202ENST00000380340 SEPT4O43236 478 aa12.8□□□□□ -0.36
APH1B-202ENST00000380340 IGHA2P01877 340 aa12.8□□□□□ -0.36
APH1B-202ENST00000380340 IGFBP4P22692 258 aa12.8□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms