RNA–Protein interactions for RNA: ENST00000380324.7

USP3-202, Transcript of ubiquitin specific peptidase 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP3, Length 2,333 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP3-202ENST00000380324 BTBD18B2RXH4 712 aa13.89□□□□□ -0.19
USP3-202ENST00000380324 U2AF2P26368 475 aaKnown RBP eCLIP13.89□□□□□ -0.192e-7■■■□□ 16.9
USP3-202ENST00000380324 AKAP17AQ02040 695 aaKnown RBP13.89□□□□□ -0.19
USP3-202ENST00000380324 TROAPQ12815 778 aa13.89□□□□□ -0.19
USP3-202ENST00000380324 SAFBQ15424 915 aaKnown RBP eCLIP13.89□□□□□ -0.19
USP3-202ENST00000380324 UVSSAQ2YD98 709 aa13.89□□□□□ -0.19
USP3-202ENST00000380324 C12orf60Q5U649 245 aa13.89□□□□□ -0.19
USP3-202ENST00000380324 AMOTL1Q8IY63 956 aa13.89□□□□□ -0.19
USP3-202ENST00000380324 SLC44A5Q8NCS7 719 aa13.89□□□□□ -0.19
USP3-202ENST00000380324 FAM200AQ8TCP9 573 aa13.89□□□□□ -0.19
USP3-202ENST00000380324 GNL3Q9BVP2 549 aaKnown RBP eCLIP13.89□□□□□ -0.19
USP3-202ENST00000380324 ATP6V0A2Q9Y487 856 aa13.89□□□□□ -0.19
USP3-202ENST00000380324 MYH1P12882 1939 aa13.89□□□□□ -0.19
USP3-202ENST00000380324 LDHCP07864 332 aa13.89□□□□□ -0.19
USP3-202ENST00000380324 RXRBP28702 533 aa13.89□□□□□ -0.19
USP3-202ENST00000380324 NDUFA8P51970 172 aa13.89□□□□□ -0.19
USP3-202ENST00000380324 GTF2IP78347 998 aa13.89□□□□□ -0.19
USP3-202ENST00000380324 LUZP1Q86V48 1076 aa13.89□□□□□ -0.19
USP3-202ENST00000380324 NOSTRINQ8IVI9 506 aa13.89□□□□□ -0.19
USP3-202ENST00000380324 ENGASEQ8NFI3 743 aa13.89□□□□□ -0.19
USP3-202ENST00000380324 ERCC4Q92889 916 aaPredicted RBP13.89□□□□□ -0.19
USP3-202ENST00000380324 PARP3Q9Y6F1 533 aa13.89□□□□□ -0.19
USP3-202ENST00000380324 DDX60LQ5H9U9 1706 aaKnown RBP13.88□□□□□ -0.19
USP3-202ENST00000380324 HMGB2P26583 209 aaKnown RBP13.88□□□□□ -0.19
USP3-202ENST00000380324 NR5A1Q13285 461 aa13.88□□□□□ -0.19
USP3-202ENST00000380324 SP8Q8IXZ3 490 aa13.88□□□□□ -0.19
USP3-202ENST00000380324 RGS22Q8NE09 1264 aa13.88□□□□□ -0.19
USP3-202ENST00000380324 RNF26Q9BY78 433 aaPredicted RBP13.88□□□□□ -0.19
USP3-202ENST00000380324 DNAJC25Q9H1X3 360 aa13.88□□□□□ -0.19
USP3-202ENST00000380324 VPS54Q9P1Q0 977 aa13.88□□□□□ -0.19
USP3-202ENST00000380324 A0A087WWV3 80 aa13.87□□□□□ -0.19
USP3-202ENST00000380324 F8W031 263 aaPredicted RBP13.87□□□□□ -0.19
USP3-202ENST00000380324 DDAH1O94760 285 aa13.87□□□□□ -0.19
USP3-202ENST00000380324 ADCY5O95622 1261 aa13.87□□□□□ -0.19
USP3-202ENST00000380324 PTMAP06454 111 aaKnown RBP13.87□□□□□ -0.19
USP3-202ENST00000380324 NPR1P16066 1061 aa13.87□□□□□ -0.19
USP3-202ENST00000380324 TFAP4Q01664 338 aa13.87□□□□□ -0.19
USP3-202ENST00000380324 KLHL34Q8N239 644 aa13.87□□□□□ -0.19
USP3-202ENST00000380324 MPNDQ8N594 471 aa13.87□□□□□ -0.19
USP3-202ENST00000380324 CTCFLQ8NI51 663 aaPredicted RBP13.87□□□□□ -0.19
USP3-202ENST00000380324 MKNK2Q9HBH9 465 aa13.87□□□□□ -0.19
USP3-202ENST00000380324 ADAMTSL1Q8N6G6 1762 aa13.87□□□□□ -0.19
USP3-202ENST00000380324 A0A1W2PQ27 194 aa13.87□□□□□ -0.19
USP3-202ENST00000380324 A0A1W2PQ64 194 aa13.87□□□□□ -0.19
USP3-202ENST00000380324 A0A1W2PQD8 194 aa13.87□□□□□ -0.19
USP3-202ENST00000380324 WDHD1O75717 1129 aaPredicted RBP13.87□□□□□ -0.19
USP3-202ENST00000380324 CALM1P0DP23 149 aa13.87□□□□□ -0.19
USP3-202ENST00000380324 CALM2P0DP24 149 aa13.87□□□□□ -0.19
USP3-202ENST00000380324 CALM3P0DP25 149 aa13.87□□□□□ -0.19
USP3-202ENST00000380324 PLCD1P51178 756 aa13.87□□□□□ -0.19
USP3-202ENST00000380324 PPP4CP60510 307 aa13.87□□□□□ -0.19
USP3-202ENST00000380324 SLC39A14Q15043 492 aa13.87□□□□□ -0.19
USP3-202ENST00000380324 TMC4Q7Z404 712 aa13.87□□□□□ -0.19
USP3-202ENST00000380324 TEX11Q8IYF3 940 aa13.87□□□□□ -0.19
USP3-202ENST00000380324 FMR1NBQ8N0W7 255 aaPredicted RBP13.87□□□□□ -0.19
USP3-202ENST00000380324 OXER1Q8TDS5 423 aa13.87□□□□□ -0.19
USP3-202ENST00000380324 PIBF1Q8WXW3 757 aa13.87□□□□□ -0.19
USP3-202ENST00000380324 RBM28Q9NW13 759 aaKnown RBP13.87□□□□□ -0.19
USP3-202ENST00000380324 ROBO3Q96MS0 1386 aa13.87□□□□□ -0.19
USP3-202ENST00000380324 PPP2R5BQ15173 497 aa13.86□□□□□ -0.19
USP3-202ENST00000380324 AXDND1Q5T1B0 1012 aaPredicted RBP13.86□□□□□ -0.19
USP3-202ENST00000380324 DPP8Q6V1X1 898 aaPredicted RBP13.86□□□□□ -0.19
USP3-202ENST00000380324 TBC1D22AQ8WUA7 517 aa13.86□□□□□ -0.19
USP3-202ENST00000380324 MAP3K14Q99558 947 aa13.86□□□□□ -0.19
USP3-202ENST00000380324 V9GY48 417 aaPredicted RBP13.86□□□□□ -0.19
USP3-202ENST00000380324 CTAGE5O15320 804 aa13.86□□□□□ -0.19
USP3-202ENST00000380324 PDE6BP35913 854 aa13.86□□□□□ -0.19
USP3-202ENST00000380324 FUT2Q10981 343 aa13.86□□□□□ -0.19
USP3-202ENST00000380324 DOK7Q18PE1 504 aa13.86□□□□□ -0.19
USP3-202ENST00000380324 RCSD1Q6JBY9 416 aa13.86□□□□□ -0.19
USP3-202ENST00000380324 TMTC3Q6ZXV5 915 aa13.86□□□□□ -0.19
USP3-202ENST00000380324 ZSCAN30Q86W11 494 aa13.86□□□□□ -0.19
USP3-202ENST00000380324 FLAD1Q8NFF5 587 aa13.86□□□□□ -0.19
USP3-202ENST00000380324 ZNF622Q969S3 477 aaKnown RBP eCLIP13.86□□□□□ -0.19
USP3-202ENST00000380324 SHISA4Q96DD7 197 aa13.86□□□□□ -0.19
USP3-202ENST00000380324 SDF4Q9BRK5 362 aa13.86□□□□□ -0.19
USP3-202ENST00000380324 CBX8Q9HC52 389 aa13.86□□□□□ -0.19
USP3-202ENST00000380324 MTMR7Q9Y216 660 aa13.86□□□□□ -0.19
USP3-202ENST00000380324 FOCADQ5VW36 1801 aa13.86□□□□□ -0.19
USP3-202ENST00000380324 FLT1P17948 1338 aa13.86□□□□□ -0.19
USP3-202ENST00000380324 CNTNAP5Q8WYK1 1306 aa13.86□□□□□ -0.19
USP3-202ENST00000380324 GPR75-ASB3A0A0A6YYF3 556 aa13.85□□□□□ -0.19
USP3-202ENST00000380324 USP17L3A6NCW0 530 aa13.85□□□□□ -0.19
USP3-202ENST00000380324 USP17L4A6NCW7 530 aa13.85□□□□□ -0.19
USP3-202ENST00000380324 TSPY3P0CV98 308 aa13.85□□□□□ -0.19
USP3-202ENST00000380324 TSPY8P0CW00 308 aa13.85□□□□□ -0.19
USP3-202ENST00000380324 PFKFB1P16118 471 aa13.85□□□□□ -0.19
USP3-202ENST00000380324 ATP2B1P20020 1258 aa13.85□□□□□ -0.19
USP3-202ENST00000380324 MSNP26038 577 aaKnown RBP13.85□□□□□ -0.19
USP3-202ENST00000380324 PTPAQ15257 358 aa13.85□□□□□ -0.19
USP3-202ENST00000380324 PKN1Q16512 942 aa13.85□□□□□ -0.19
USP3-202ENST00000380324 USP17L1Q7RTZ2 530 aa13.85□□□□□ -0.19
USP3-202ENST00000380324 ZC3H12CQ9C0D7 883 aaKnown RBP13.85□□□□□ -0.19
USP3-202ENST00000380324 KAT14Q9H8E8 782 aa13.85□□□□□ -0.19
USP3-202ENST00000380324 IL17RBQ9NRM6 502 aa13.85□□□□□ -0.19
USP3-202ENST00000380324 AP5Z1O43299 807 aa13.85□□□□□ -0.19
USP3-202ENST00000380324 IGSF3O75054 1194 aa13.85□□□□□ -0.19
USP3-202ENST00000380324 ZNF165P49910 485 aa13.85□□□□□ -0.19
USP3-202ENST00000380324 JMYQ8N9B5 988 aa13.85□□□□□ -0.19
USP3-202ENST00000380324 CLIC6Q96NY7 704 aa13.85□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 51.2 ms