RNA–Protein interactions for RNA: ENST00000380281.5

PRPF40B-202, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PRPF40B, Length 3,154 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-202ENST00000380281 PTPAQ15257 358 aa14.18□□□□□ -0.14
PRPF40B-202ENST00000380281 RTN1Q16799 776 aa14.18□□□□□ -0.14
PRPF40B-202ENST00000380281 FAM212AQ96EL1 285 aa14.18□□□□□ -0.14
PRPF40B-202ENST00000380281 INTS13Q9NVM9 706 aa14.18□□□□□ -0.14
PRPF40B-202ENST00000380281 IMPACTQ9P2X3 320 aa14.18□□□□□ -0.14
PRPF40B-202ENST00000380281 PCDH11XQ9BZA7 1347 aa14.17□□□□□ -0.14
PRPF40B-202ENST00000380281 PCDH11YQ9BZA8 1340 aa14.17□□□□□ -0.14
PRPF40B-202ENST00000380281 AKAP17AQ02040 695 aaKnown RBP14.17□□□□□ -0.14
PRPF40B-202ENST00000380281 EVX2Q03828 476 aa14.17□□□□□ -0.14
PRPF40B-202ENST00000380281 WTAPQ15007 396 aa14.17□□□□□ -0.14
PRPF40B-202ENST00000380281 WWC2Q6AWC2 1192 aa14.17□□□□□ -0.14
PRPF40B-202ENST00000380281 TRIM22Q8IYM9 498 aa14.17□□□□□ -0.14
PRPF40B-202ENST00000380281 ZBTB38Q8NAP3 1195 aaPredicted RBP14.17□□□□□ -0.14
PRPF40B-202ENST00000380281 IGDCC4Q8TDY8 1250 aa14.17□□□□□ -0.14
PRPF40B-202ENST00000380281 ISCA1Q9BUE6 129 aa14.17□□□□□ -0.14
PRPF40B-202ENST00000380281 LY9Q9HBG7 655 aa14.17□□□□□ -0.14
PRPF40B-202ENST00000380281 FAM217BQ9NTX9 383 aaPredicted RBP14.17□□□□□ -0.14
PRPF40B-202ENST00000380281 RAI14Q9P0K7 980 aa14.17□□□□□ -0.14
PRPF40B-202ENST00000380281 MAN1B1Q9UKM7 699 aa14.17□□□□□ -0.14
PRPF40B-202ENST00000380281 CIAO1O76071 339 aa14.17□□□□□ -0.14
PRPF40B-202ENST00000380281 STARD3NLO95772 234 aa14.17□□□□□ -0.14
PRPF40B-202ENST00000380281 POSTNQ15063 836 aa14.17□□□□□ -0.14
PRPF40B-202ENST00000380281 DNAJC21Q5F1R6 531 aaKnown RBP14.17□□□□□ -0.14
PRPF40B-202ENST00000380281 NLRP10Q86W26 655 aa14.17□□□□□ -0.14
PRPF40B-202ENST00000380281 NOSTRINQ8IVI9 506 aa14.17□□□□□ -0.14
PRPF40B-202ENST00000380281 STRBPQ96SI9 672 aaKnown RBP14.17□□□□□ -0.14
PRPF40B-202ENST00000380281 CSRNP2Q9H175 543 aa14.17□□□□□ -0.14
PRPF40B-202ENST00000380281 CEP83Q9Y592 693 aa14.17□□□□□ -0.14
PRPF40B-202ENST00000380281 PARP3Q9Y6F1 533 aa14.17□□□□□ -0.14
PRPF40B-202ENST00000380281 PDE8BO95263 885 aa14.16□□□□□ -0.14
PRPF40B-202ENST00000380281 CCDC172P0C7W6 258 aa14.16□□□□□ -0.14
PRPF40B-202ENST00000380281 TOB1P50616 345 aaPredicted RBP14.16□□□□□ -0.14
PRPF40B-202ENST00000380281 CTSWP56202 376 aa14.16□□□□□ -0.14
PRPF40B-202ENST00000380281 LONRF2Q1L5Z9 754 aa14.16□□□□□ -0.14
PRPF40B-202ENST00000380281 TRIM65Q6PJ69 517 aa14.16□□□□□ -0.14
PRPF40B-202ENST00000380281 UBAC1Q9BSL1 405 aa14.16□□□□□ -0.14
PRPF40B-202ENST00000380281 PSDA5PKW4 1024 aaPredicted RBP14.16□□□□□ -0.14
PRPF40B-202ENST00000380281 SPATA5Q8NB90 893 aa14.16□□□□□ -0.14
PRPF40B-202ENST00000380281 CXorf56Q9H5V9 222 aa14.16□□□□□ -0.14
PRPF40B-202ENST00000380281 LMO7Q8WWI1 1683 aa14.16□□□□□ -0.14
PRPF40B-202ENST00000380281 MAP3K12Q12852 859 aa14.16□□□□□ -0.14
PRPF40B-202ENST00000380281 SUGCTQ9HAC7 445 aa14.16□□□□□ -0.14
PRPF40B-202ENST00000380281 KCND1Q9NSA2 647 aa14.16□□□□□ -0.14
PRPF40B-202ENST00000380281 V9GY48 417 aaPredicted RBP14.16□□□□□ -0.14
PRPF40B-202ENST00000380281 CBFA2T2O43439 604 aa14.15□□□□□ -0.14
PRPF40B-202ENST00000380281 ATP8B1O43520 1251 aa14.15□□□□□ -0.14
PRPF40B-202ENST00000380281 PCCAP05165 728 aaPredicted RBP14.15□□□□□ -0.14
PRPF40B-202ENST00000380281 IVLP07476 585 aa14.15□□□□□ -0.14
PRPF40B-202ENST00000380281 VSTM4Q8IW00 320 aa14.15□□□□□ -0.14
PRPF40B-202ENST00000380281 MAP3K14Q99558 947 aa14.15□□□□□ -0.14
PRPF40B-202ENST00000380281 FAN1Q9Y2M0 1017 aa14.15□□□□□ -0.14
PRPF40B-202ENST00000380281 AFDNP55196 1824 aaKnown RBP14.15□□□□□ -0.14
PRPF40B-202ENST00000380281 VWA3AA6NCI4 1184 aa14.15□□□□□ -0.14
PRPF40B-202ENST00000380281 CYP7A1P22680 504 aa14.15□□□□□ -0.14
PRPF40B-202ENST00000380281 NTRK3Q16288 839 aa14.15□□□□□ -0.14
PRPF40B-202ENST00000380281 EARS2Q5JPH6 523 aaKnown RBP14.15□□□□□ -0.14
PRPF40B-202ENST00000380281 DZIP3Q86Y13 1208 aaKnown RBP14.15□□□□□ -0.14
PRPF40B-202ENST00000380281 RASSF8Q8NHQ8 419 aa14.15□□□□□ -0.14
PRPF40B-202ENST00000380281 WNT7AO00755 349 aa14.14□□□□□ -0.15
PRPF40B-202ENST00000380281 RHOXF2BP0C7M4 288 aa14.14□□□□□ -0.15
PRPF40B-202ENST00000380281 ERCC3P19447 782 aa14.14□□□□□ -0.15
PRPF40B-202ENST00000380281 RESP18Q5W5W9 173 aa14.14□□□□□ -0.15
PRPF40B-202ENST00000380281 PPM1EQ8WY54 764 aa14.14□□□□□ -0.15
PRPF40B-202ENST00000380281 RHOXF2Q9BQY4 288 aa14.14□□□□□ -0.15
PRPF40B-202ENST00000380281 VPS16Q9H269 839 aa14.14□□□□□ -0.15
PRPF40B-202ENST00000380281 FER1L4A9Z1Z3 1794 aa14.14□□□□□ -0.15
PRPF40B-202ENST00000380281 ABL1P00519 1130 aa14.14□□□□□ -0.15
PRPF40B-202ENST00000380281 GYG1P46976 350 aa14.14□□□□□ -0.15
PRPF40B-202ENST00000380281 CNPY4Q8N129 248 aa14.14□□□□□ -0.15
PRPF40B-202ENST00000380281 MICALL1Q8N3F8 863 aa14.14□□□□□ -0.15
PRPF40B-202ENST00000380281 IQUBQ8NA54 791 aa14.14□□□□□ -0.15
PRPF40B-202ENST00000380281 PSD3Q9NYI0 1048 aa14.14□□□□□ -0.15
PRPF40B-202ENST00000380281 NMT2O60551 498 aa14.14□□□□□ -0.15
PRPF40B-202ENST00000380281 PPP2R3AQ06190 1150 aa14.14□□□□□ -0.15
PRPF40B-202ENST00000380281 GPR161Q8N6U8 529 aaKnown RBP14.14□□□□□ -0.15
PRPF40B-202ENST00000380281 MRPL44Q9H9J2 332 aaKnown RBP14.14□□□□□ -0.15
PRPF40B-202ENST00000380281 TFR2Q9UP52 801 aa14.14□□□□□ -0.15
PRPF40B-202ENST00000380281 PHLPP2Q6ZVD8 1323 aa14.14□□□□□ -0.15
PRPF40B-202ENST00000380281 CUTAO60888 179 aa14.13□□□□□ -0.15
PRPF40B-202ENST00000380281 DYNLL1P63167 89 aaKnown RBP14.13□□□□□ -0.15
PRPF40B-202ENST00000380281 AKNAD1Q5T1N1 836 aa14.13□□□□□ -0.15
PRPF40B-202ENST00000380281 GIGYF2Q6Y7W6 1299 aaKnown RBP14.13□□□□□ -0.15
PRPF40B-202ENST00000380281 GDAP1L1Q96MZ0 367 aa14.13□□□□□ -0.15
PRPF40B-202ENST00000380281 ERVV-2B6SEH9 535 aa14.13□□□□□ -0.15
PRPF40B-202ENST00000380281 DHX8Q14562 1220 aaKnown RBP14.13□□□□□ -0.15
PRPF40B-202ENST00000380281 TUBE1Q9UJT0 475 aa14.13□□□□□ -0.15
PRPF40B-202ENST00000380281 RFX7Q2KHR2 1363 aa14.12□□□□□ -0.15
PRPF40B-202ENST00000380281 GSG1L2A8MUP6 293 aa14.12□□□□□ -0.15
PRPF40B-202ENST00000380281 IKBKBO14920 756 aa14.12□□□□□ -0.15
PRPF40B-202ENST00000380281 ZSCAN12O43309 604 aa14.12□□□□□ -0.15
PRPF40B-202ENST00000380281 PLEKHA8P1O95397 391 aa14.12□□□□□ -0.15
PRPF40B-202ENST00000380281 TPM1P09493 284 aa14.12□□□□□ -0.15
PRPF40B-202ENST00000380281 CORO7P57737 925 aa14.12□□□□□ -0.15
PRPF40B-202ENST00000380281 ZNF569Q5MCW4 686 aa14.12□□□□□ -0.15
PRPF40B-202ENST00000380281 CCDC91Q7Z6B0 441 aa14.12□□□□□ -0.15
PRPF40B-202ENST00000380281 PPFIBP1Q86W92 1011 aa14.12□□□□□ -0.15
PRPF40B-202ENST00000380281 MED15Q96RN5 788 aa14.12□□□□□ -0.15
PRPF40B-202ENST00000380281 BTG4Q9NY30 223 aa14.12□□□□□ -0.15
PRPF40B-202ENST00000380281 HPSEQ9Y251 543 aa14.12□□□□□ -0.15
PRPF40B-202ENST00000380281 LAMA4Q16363 1823 aa14.12□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms