RNA–Protein interactions for RNA: ENST00000380071.7

RFC3-201, Transcript of replication factor C subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RFC3, Length 2,402 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC3-201ENST00000380071 LRRN4CLQ8ND94 238 aa13.93□□□□□ -0.18
RFC3-201ENST00000380071 RIOK1Q9BRS2 568 aaKnown RBP13.93□□□□□ -0.18
RFC3-201ENST00000380071 SRPRBQ9Y5M8 271 aaKnown RBP13.93□□□□□ -0.18
RFC3-201ENST00000380071 TOP1P11387 765 aaKnown RBP13.93□□□□□ -0.18
RFC3-201ENST00000380071 KCNJ6P48051 423 aa13.93□□□□□ -0.18
RFC3-201ENST00000380071 ELF2Q15723 593 aa13.93□□□□□ -0.18
RFC3-201ENST00000380071 PKN1Q16512 942 aa13.93□□□□□ -0.18
RFC3-201ENST00000380071 KMT5BQ4FZB7 885 aa13.93□□□□□ -0.18
RFC3-201ENST00000380071 UTP14CQ5TAP6 766 aaKnown RBP13.93□□□□□ -0.18
RFC3-201ENST00000380071 TRMT44Q8IYL2 757 aaKnown RBP13.93□□□□□ -0.18
RFC3-201ENST00000380071 ENAHQ8N8S7 591 aaPredicted RBP13.93□□□□□ -0.18
RFC3-201ENST00000380071 MARCH10Q8NA82 808 aaPredicted RBP13.93□□□□□ -0.18
RFC3-201ENST00000380071 ESR2Q92731 530 aa13.93□□□□□ -0.18
RFC3-201ENST00000380071 ERO1AQ96HE7 468 aa13.93□□□□□ -0.18
RFC3-201ENST00000380071 MED15Q96RN5 788 aa13.93□□□□□ -0.18
RFC3-201ENST00000380071 MTA3Q9BTC8 594 aa13.93□□□□□ -0.18
RFC3-201ENST00000380071 BCL9LQ86UU0 1499 aa13.93□□□□□ -0.18
RFC3-201ENST00000380071 EVX2Q03828 476 aa13.92□□□□□ -0.18
RFC3-201ENST00000380071 ERFEQ4G0M1 354 aa13.92□□□□□ -0.18
RFC3-201ENST00000380071 NT5DC1Q5TFE4 455 aa13.92□□□□□ -0.18
RFC3-201ENST00000380071 FEZ1Q99689 392 aa13.92□□□□□ -0.18
RFC3-201ENST00000380071 ANAPC4Q9UJX5 808 aa13.92□□□□□ -0.18
RFC3-201ENST00000380071 RTL9Q8NET4 1388 aa13.92□□□□□ -0.18
RFC3-201ENST00000380071 TAF1P21675 1872 aa13.92□□□□□ -0.18
RFC3-201ENST00000380071 ZNF804BA4D1E1 1349 aa13.92□□□□□ -0.18
RFC3-201ENST00000380071 ACTN4O43707 911 aaKnown RBP13.92□□□□□ -0.18
RFC3-201ENST00000380071 NRDCO43847 1150 aa13.92□□□□□ -0.18
RFC3-201ENST00000380071 ADAMTS2O95450 1211 aa13.92□□□□□ -0.18
RFC3-201ENST00000380071 MORC3Q14149 939 aa13.92□□□□□ -0.18
RFC3-201ENST00000380071 HOMER1Q86YM7 354 aa13.92□□□□□ -0.18
RFC3-201ENST00000380071 ZNF579Q8NAF0 562 aaKnown RBP13.92□□□□□ -0.18
RFC3-201ENST00000380071 ZNF384Q8TF68 577 aa13.92□□□□□ -0.18
RFC3-201ENST00000380071 SMARCE1Q969G3 411 aa13.92□□□□□ -0.18
RFC3-201ENST00000380071 HOOK1Q9UJC3 728 aaKnown RBP13.92□□□□□ -0.18
RFC3-201ENST00000380071 NFE2L3Q9Y4A8 694 aa13.92□□□□□ -0.18
RFC3-201ENST00000380071 PHLPP1O60346 1717 aa13.92□□□□□ -0.18
RFC3-201ENST00000380071 COL1A1P02452 1464 aaPredicted RBP13.92□□□□□ -0.18
RFC3-201ENST00000380071 MYH2Q9UKX2 1941 aa13.91□□□□□ -0.18
RFC3-201ENST00000380071 A0A087X0B3 334 aa13.91□□□□□ -0.18
RFC3-201ENST00000380071 WNT7AO00755 349 aa13.91□□□□□ -0.18
RFC3-201ENST00000380071 PLEKHA8P1O95397 391 aa13.91□□□□□ -0.18
RFC3-201ENST00000380071 DHX8Q14562 1220 aaKnown RBP13.91□□□□□ -0.18
RFC3-201ENST00000380071 CCDC93Q567U6 631 aa13.91□□□□□ -0.18
RFC3-201ENST00000380071 NOM1Q5C9Z4 860 aaKnown RBP13.91□□□□□ -0.18
RFC3-201ENST00000380071 EPSTI1Q96J88 318 aa13.91□□□□□ -0.18
RFC3-201ENST00000380071 ZSCAN10Q96SZ4 725 aaPredicted RBP13.91□□□□□ -0.18
RFC3-201ENST00000380071 CDC5LQ99459 802 aaKnown RBP13.91□□□□□ -0.18
RFC3-201ENST00000380071 RNF26Q9BY78 433 aaPredicted RBP13.91□□□□□ -0.18
RFC3-201ENST00000380071 L2HGDHQ9H9P8 463 aa13.91□□□□□ -0.18
RFC3-201ENST00000380071 V9GY48 417 aaPredicted RBP13.91□□□□□ -0.18
RFC3-201ENST00000380071 CDK11BP21127 795 aaKnown RBP13.91□□□□□ -0.18
RFC3-201ENST00000380071 RCAN1P53805 252 aa13.91□□□□□ -0.18
RFC3-201ENST00000380071 AKAP17AQ02040 695 aaKnown RBP13.91□□□□□ -0.18
RFC3-201ENST00000380071 FUT2Q10981 343 aa13.91□□□□□ -0.18
RFC3-201ENST00000380071 SMIM5Q71RC9 77 aa13.91□□□□□ -0.18
RFC3-201ENST00000380071 TMEM139Q8IV31 216 aa13.91□□□□□ -0.18
RFC3-201ENST00000380071 ANKRD18AQ8IVF6 992 aa13.91□□□□□ -0.18
RFC3-201ENST00000380071 REXO1L1PQ8IX06 675 aa13.91□□□□□ -0.18
RFC3-201ENST00000380071 SAMSN1Q9NSI8 373 aaKnown RBP13.91□□□□□ -0.18
RFC3-201ENST00000380071 OGFRQ9NZT2 677 aa13.91□□□□□ -0.18
RFC3-201ENST00000380071 COL16A1Q07092 1604 aaPredicted RBP13.9□□□□□ -0.18
RFC3-201ENST00000380071 FANCGO15287 622 aa13.9□□□□□ -0.18
RFC3-201ENST00000380071 KCNQ2O43526 872 aa13.9□□□□□ -0.18
RFC3-201ENST00000380071 ZNF18P17022 549 aa13.9□□□□□ -0.18
RFC3-201ENST00000380071 CASP1P29466 404 aa13.9□□□□□ -0.18
RFC3-201ENST00000380071 TRIM65Q6PJ69 517 aa13.9□□□□□ -0.18
RFC3-201ENST00000380071 MLKLQ8NB16 471 aa13.9□□□□□ -0.18
RFC3-201ENST00000380071 PHF20Q9BVI0 1012 aa13.9□□□□□ -0.18
RFC3-201ENST00000380071 DNAI1Q9UI46 699 aa13.9□□□□□ -0.18
RFC3-201ENST00000380071 DDX41Q9UJV9 622 aaKnown RBP13.9□□□□□ -0.18
RFC3-201ENST00000380071 CEP131Q9UPN4 1083 aa13.9□□□□□ -0.18
RFC3-201ENST00000380071 SPATA31A1Q5TZJ5 1347 aa13.9□□□□□ -0.18
RFC3-201ENST00000380071 KCNQ4P56696 695 aa13.9□□□□□ -0.18
RFC3-201ENST00000380071 ETF1P62495 437 aaKnown RBP13.9□□□□□ -0.18
RFC3-201ENST00000380071 ERCC6LQ2NKX8 1250 aa13.9□□□□□ -0.18
RFC3-201ENST00000380071 IFIT1BQ5T764 474 aaKnown RBP13.9□□□□□ -0.18
RFC3-201ENST00000380071 FBXO38Q6PIJ6 1188 aa13.9□□□□□ -0.18
RFC3-201ENST00000380071 ENOX1Q8TC92 643 aaKnown RBP13.9□□□□□ -0.18
RFC3-201ENST00000380071 DHX58Q96C10 678 aa13.9□□□□□ -0.18
RFC3-201ENST00000380071 FAM84BQ96KN1 310 aaPredicted RBP13.9□□□□□ -0.18
RFC3-201ENST00000380071 MINPP1Q9UNW1 487 aa13.9□□□□□ -0.18
RFC3-201ENST00000380071 PLCH1Q4KWH8 1693 aa13.9□□□□□ -0.19
RFC3-201ENST00000380071 BAZ2AQ9UIF9 1905 aaKnown RBP13.89□□□□□ -0.19
RFC3-201ENST00000380071 CICQ96RK0 1608 aaPredicted RBP13.89□□□□□ -0.19
RFC3-201ENST00000380071 MYH6P13533 1939 aa13.89□□□□□ -0.19
RFC3-201ENST00000380071 KDM4FA0A1W2PPD8 638 aa13.89□□□□□ -0.19
RFC3-201ENST00000380071 MYO1BO43795 1136 aa13.89□□□□□ -0.19
RFC3-201ENST00000380071 KLRK1P26718 216 aa13.89□□□□□ -0.19
RFC3-201ENST00000380071 AFMP43652 599 aa13.89□□□□□ -0.19
RFC3-201ENST00000380071 ADKP55263 362 aaKnown RBP13.89□□□□□ -0.19
RFC3-201ENST00000380071 TBX2Q13207 712 aaPredicted RBP13.89□□□□□ -0.19
RFC3-201ENST00000380071 CTR9Q6PD62 1173 aa13.89□□□□□ -0.19
RFC3-201ENST00000380071 BICDL1Q6ZP65 573 aa13.89□□□□□ -0.19
RFC3-201ENST00000380071 ZNF397Q8NF99 534 aaPredicted RBP13.89□□□□□ -0.19
RFC3-201ENST00000380071 CELF1Q92879 486 aaKnown RBP13.89□□□□□ -0.19
RFC3-201ENST00000380071 GNL3LQ9NVN8 582 aaKnown RBP13.89□□□□□ -0.19
RFC3-201ENST00000380071 TRIM75PA6NK02 468 aa13.89□□□□□ -0.19
RFC3-201ENST00000380071 PRPF3O43395 683 aaKnown RBP13.89□□□□□ -0.19
RFC3-201ENST00000380071 KRT2P35908 639 aa13.89□□□□□ -0.19
RFC3-201ENST00000380071 TROAPQ12815 778 aa13.89□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms