RNA–Protein interactions for RNA: ENST00000380010.8

SLC19A1-202, Transcript of solute carrier family 19 member 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SLC19A1, Length 1,884 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC19A1-202ENST00000380010 ZNF444Q8N0Y2 327 aaPredicted RBP27.1■■□□□ 1.93
SLC19A1-202ENST00000380010 FAM196BA6NMK8 535 aa27.09■■□□□ 1.93
SLC19A1-202ENST00000380010 ZBTB43O43298 467 aa27.09■■□□□ 1.93
SLC19A1-202ENST00000380010 MTMR14Q8NCE2 650 aa27.09■■□□□ 1.93
SLC19A1-202ENST00000380010 PTPDC1A2A3K4 754 aa27.08■■□□□ 1.93
SLC19A1-202ENST00000380010 WNT10BO00744 389 aa27.08■■□□□ 1.93
SLC19A1-202ENST00000380010 SYT1P21579 422 aa27.08■■□□□ 1.93
SLC19A1-202ENST00000380010 METAP2P50579 478 aaKnown RBP eCLIP27.08■■□□□ 1.933e-8■■□□□ 13.7
SLC19A1-202ENST00000380010 ZNF280AP59817 542 aaPredicted RBP27.08■■□□□ 1.93
SLC19A1-202ENST00000380010 NUCB2P80303 420 aa27.08■■□□□ 1.93
SLC19A1-202ENST00000380010 SPDYE2Q495Y8 402 aa27.08■■□□□ 1.93
SLC19A1-202ENST00000380010 RCSD1Q6JBY9 416 aa27.08■■□□□ 1.93
SLC19A1-202ENST00000380010 ZSCAN29Q8IWY8 852 aaPredicted RBP27.08■■□□□ 1.93
SLC19A1-202ENST00000380010 MICALL2Q8IY33 904 aa27.08■■□□□ 1.93
SLC19A1-202ENST00000380010 SMARCC2Q8TAQ2 1214 aa27.08■■□□□ 1.93
SLC19A1-202ENST00000380010 DNAJC18Q9H819 358 aa27.08■■□□□ 1.93
SLC19A1-202ENST00000380010 FAM217BQ9NTX9 383 aaPredicted RBP27.08■■□□□ 1.93
SLC19A1-202ENST00000380010 SERPINB13Q9UIV8 391 aa27.08■■□□□ 1.93
SLC19A1-202ENST00000380010 SIPA1L1O43166 1804 aa27.08■■□□□ 1.93
SLC19A1-202ENST00000380010 SBF1O95248 1867 aa27.08■■□□□ 1.93
SLC19A1-202ENST00000380010 NPM3O75607 178 aaKnown RBP27.08■■□□□ 1.93
SLC19A1-202ENST00000380010 TSPY3P0CV98 308 aa27.08■■□□□ 1.93
SLC19A1-202ENST00000380010 TSPY8P0CW00 308 aa27.08■■□□□ 1.93
SLC19A1-202ENST00000380010 RPS12P25398 132 aaKnown RBP27.08■■□□□ 1.93
SLC19A1-202ENST00000380010 ADD1P35611 737 aaKnown RBP27.08■■□□□ 1.93
SLC19A1-202ENST00000380010 IFIT1BQ5T764 474 aaKnown RBP27.08■■□□□ 1.93
SLC19A1-202ENST00000380010 ZNF654Q8IZM8 581 aa27.08■■□□□ 1.93
SLC19A1-202ENST00000380010 GOLGA8AA7E2F4 631 aa27.07■■□□□ 1.92
SLC19A1-202ENST00000380010 HLA-DOAP06340 250 aa27.07■■□□□ 1.92
SLC19A1-202ENST00000380010 SAMD7Q7Z3H4 446 aa27.07■■□□□ 1.92
SLC19A1-202ENST00000380010 VEZTQ9HBM0 779 aa27.07■■□□□ 1.92
SLC19A1-202ENST00000380010 SCAF8Q9UPN6 1271 aaKnown RBP27.07■■□□□ 1.92
SLC19A1-202ENST00000380010 SHMT1P34896 483 aa27.06■■□□□ 1.92
SLC19A1-202ENST00000380010 LLPHQ9BRT6 129 aaKnown RBP27.06■■□□□ 1.92
SLC19A1-202ENST00000380010 CNOT7Q9UIV1 285 aaKnown RBP27.06■■□□□ 1.92
SLC19A1-202ENST00000380010 CNTNAP1P78357 1384 aa27.06■■□□□ 1.92
SLC19A1-202ENST00000380010 ENTPD3O75355 529 aa27.06■■□□□ 1.92
SLC19A1-202ENST00000380010 BRD1O95696 1058 aa27.06■■□□□ 1.92
SLC19A1-202ENST00000380010 NFKBIBQ15653 356 aa27.06■■□□□ 1.92
SLC19A1-202ENST00000380010 TMTC2Q8N394 836 aa27.06■■□□□ 1.92
SLC19A1-202ENST00000380010 NUP133Q8WUM0 1156 aa27.06■■□□□ 1.92
SLC19A1-202ENST00000380010 ZNF287Q9HBT7 754 aa27.06■■□□□ 1.92
SLC19A1-202ENST00000380010 TMOD2Q9NZR1 351 aa27.06■■□□□ 1.92
SLC19A1-202ENST00000380010 DPF2Q92785 391 aa27.05■■□□□ 1.92
SLC19A1-202ENST00000380010 CHAMP1Q96JM3 812 aa27.05■■□□□ 1.92
SLC19A1-202ENST00000380010 DHX36Q9H2U1 1008 aaKnown RBP27.05■■□□□ 1.92
SLC19A1-202ENST00000380010 RNF181Q9P0P0 153 aa27.05■■□□□ 1.92
SLC19A1-202ENST00000380010 DICER1Q9UPY3 1922 aaKnown RBP27.05■■□□□ 1.92
SLC19A1-202ENST00000380010 ASTN2O75129 1339 aaPredicted RBP27.04■■□□□ 1.92
SLC19A1-202ENST00000380010 AKR1B1P15121 316 aa27.04■■□□□ 1.92
SLC19A1-202ENST00000380010 TBC1D10BQ4KMP7 808 aaPredicted RBP27.04■■□□□ 1.92
SLC19A1-202ENST00000380010 CDAN1Q8IWY9 1227 aa27.04■■□□□ 1.92
SLC19A1-202ENST00000380010 GNL3Q9BVP2 549 aaKnown RBP eCLIP27.04■■□□□ 1.92
SLC19A1-202ENST00000380010 FDPSP14324 419 aaKnown RBP27.04■■□□□ 1.92
SLC19A1-202ENST00000380010 SYNE3Q6ZMZ3 975 aa27.04■■□□□ 1.92
SLC19A1-202ENST00000380010 EHD4Q9H223 541 aa27.04■■□□□ 1.92
SLC19A1-202ENST00000380010 STX6O43752 255 aa27.03■■□□□ 1.92
SLC19A1-202ENST00000380010 NEDD1Q8NHV4 660 aa27.03■■□□□ 1.92
SLC19A1-202ENST00000380010 PI4KBQ9UBF8 816 aa27.03■■□□□ 1.92
SLC19A1-202ENST00000380010 ATRNL1Q5VV63 1379 aa27.03■■□□□ 1.92
SLC19A1-202ENST00000380010 FOSBP53539 338 aa27.02■■□□□ 1.92
SLC19A1-202ENST00000380010 NBR1Q14596 966 aa27.02■■□□□ 1.92
SLC19A1-202ENST00000380010 SHROOM1Q2M3G4 852 aaPredicted RBP27.02■■□□□ 1.92
SLC19A1-202ENST00000380010 LARP1BQ659C4 914 aaKnown RBP27.02■■□□□ 1.92
SLC19A1-202ENST00000380010 TCP11L1Q9NUJ3 509 aa27.02■■□□□ 1.92
SLC19A1-202ENST00000380010 SWAP70Q9UH65 585 aa27.02■■□□□ 1.92
SLC19A1-202ENST00000380010 CPLX1O14810 134 aa27.02■■□□□ 1.92
SLC19A1-202ENST00000380010 CLEC10AQ8IUN9 316 aa27.02■■□□□ 1.92
SLC19A1-202ENST00000380010 CMTR1Q8N1G2 835 aaKnown RBP27.02■■□□□ 1.92
SLC19A1-202ENST00000380010 CRACR2BQ8N4Y2 399 aaPredicted RBP27.02■■□□□ 1.92
SLC19A1-202ENST00000380010 TMEM39BQ9GZU3 492 aa27.02■■□□□ 1.92
SLC19A1-202ENST00000380010 MTMR6Q9Y217 621 aa27.02■■□□□ 1.92
SLC19A1-202ENST00000380010 NID2Q14112 1375 aa27.01■■□□□ 1.91
SLC19A1-202ENST00000380010 TROAPQ12815 778 aa27.01■■□□□ 1.91
SLC19A1-202ENST00000380010 NTRK3Q16288 839 aa27.01■■□□□ 1.91
SLC19A1-202ENST00000380010 RTN1Q16799 776 aa27.01■■□□□ 1.91
SLC19A1-202ENST00000380010 C9orf131Q5VYM1 1079 aa27.01■■□□□ 1.91
SLC19A1-202ENST00000380010 FAM151AQ8WW52 585 aa27.01■■□□□ 1.91
SLC19A1-202ENST00000380010 CATIPQ7Z7H3 387 aa27■■□□□ 1.91
SLC19A1-202ENST00000380010 FANCBQ8NB91 859 aa27■■□□□ 1.91
SLC19A1-202ENST00000380010 PHKBQ93100 1093 aa27■■□□□ 1.91
SLC19A1-202ENST00000380010 CEP95Q96GE4 821 aa27■■□□□ 1.91
SLC19A1-202ENST00000380010 CSRNP1Q96S65 589 aa27■■□□□ 1.91
SLC19A1-202ENST00000380010 UBE2Q2LH0YL09 131 aa27■■□□□ 1.91
SLC19A1-202ENST00000380010 MYO1BO43795 1136 aa27■■□□□ 1.91
SLC19A1-202ENST00000380010 DHX16O60231 1041 aaKnown RBP27■■□□□ 1.91
SLC19A1-202ENST00000380010 NT5C2P49902 561 aa27■■□□□ 1.91
SLC19A1-202ENST00000380010 DGKHQ86XP1 1220 aa27■■□□□ 1.91
SLC19A1-202ENST00000380010 ANKS1AQ92625 1134 aa27■■□□□ 1.91
SLC19A1-202ENST00000380010 CHMP4CQ96CF2 233 aa27■■□□□ 1.91
SLC19A1-202ENST00000380010 STX8Q9UNK0 236 aa27■■□□□ 1.91
SLC19A1-202ENST00000380010 COL2A1P02458 1487 aaPredicted RBP26.99■■□□□ 1.91
SLC19A1-202ENST00000380010 VPS37CA5D8V6 355 aaPredicted RBP26.99■■□□□ 1.91
SLC19A1-202ENST00000380010 DDNO94850 711 aaPredicted RBP26.99■■□□□ 1.91
SLC19A1-202ENST00000380010 GPC2Q8N158 579 aa26.99■■□□□ 1.91
SLC19A1-202ENST00000380010 FAM184AQ8NB25 1140 aa26.99■■□□□ 1.91
SLC19A1-202ENST00000380010 WDR33Q9C0J8 1336 aaKnown RBP26.99■■□□□ 1.91
SLC19A1-202ENST00000380010 ZSCAN22P10073 491 aaPredicted RBP26.98■■□□□ 1.91
SLC19A1-202ENST00000380010 HMGN5P82970 282 aaKnown RBP26.98■■□□□ 1.91
SLC19A1-202ENST00000380010 KIF4BQ2VIQ3 1234 aa26.98■■□□□ 1.91
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms