RNA–Protein interactions for RNA: ENST00000379989.6

CDKL5-201, Transcript of cyclin dependent kinase like 5, humanhuman

TSL 1 (best) BASIC

Gene CDKL5, Length 3,463 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL5-201ENST00000379989 TMEM165Q9HC07 324 aa8.46□□□□□ -1.05
CDKL5-201ENST00000379989 IFNKQ9P0W0 207 aa8.46□□□□□ -1.05
CDKL5-201ENST00000379989 PUF60Q9UHX1 559 aaKnown RBP8.46□□□□□ -1.05
CDKL5-201ENST00000379989 PCDHGC5Q9Y5F6 944 aa8.46□□□□□ -1.05
CDKL5-201ENST00000379989 DISP2A7MBM2 1401 aa8.46□□□□□ -1.05
CDKL5-201ENST00000379989 AHCYL1O43865 530 aa8.46□□□□□ -1.05
CDKL5-201ENST00000379989 FMNL1O95466 1100 aaPredicted RBP8.46□□□□□ -1.05
CDKL5-201ENST00000379989 ARHGAP25P42331 645 aa8.46□□□□□ -1.05
CDKL5-201ENST00000379989 PARP9Q8IXQ6 854 aa8.46□□□□□ -1.05
CDKL5-201ENST00000379989 CCDC13Q8IYE1 715 aa8.46□□□□□ -1.05
CDKL5-201ENST00000379989 USHBP1Q8N6Y0 703 aa8.46□□□□□ -1.05
CDKL5-201ENST00000379989 LEO1Q8WVC0 666 aaPredicted RBP8.46□□□□□ -1.05
CDKL5-201ENST00000379989 YIPF2Q9BWQ6 316 aa8.46□□□□□ -1.05
CDKL5-201ENST00000379989 VIPAS39Q9H9C1 493 aa8.46□□□□□ -1.05
CDKL5-201ENST00000379989 LIMCH1Q9UPQ0 1083 aa8.46□□□□□ -1.05
CDKL5-201ENST00000379989 PPP2R2CQ9Y2T4 447 aa8.46□□□□□ -1.05
CDKL5-201ENST00000379989 GRM8O00222 908 aa8.46□□□□□ -1.06
CDKL5-201ENST00000379989 ZSCAN12O43309 604 aa8.46□□□□□ -1.06
CDKL5-201ENST00000379989 CABP4P57796 275 aa8.46□□□□□ -1.06
CDKL5-201ENST00000379989 CWF19L1Q69YN2 538 aaKnown RBP8.46□□□□□ -1.06
CDKL5-201ENST00000379989 CDC37L1Q7L3B6 337 aa8.46□□□□□ -1.06
CDKL5-201ENST00000379989 CCDC83Q8IWF9 413 aa8.46□□□□□ -1.06
CDKL5-201ENST00000379989 PLBD2Q8NHP8 589 aa8.46□□□□□ -1.06
CDKL5-201ENST00000379989 FAM76AQ8TAV0 307 aa8.46□□□□□ -1.06
CDKL5-201ENST00000379989 RSRC1Q96IZ7 334 aaKnown RBP8.46□□□□□ -1.06
CDKL5-201ENST00000379989 GPR108Q9NPR9 543 aa8.46□□□□□ -1.06
CDKL5-201ENST00000379989 TFIP11Q9UBB9 837 aaKnown RBP8.46□□□□□ -1.06
CDKL5-201ENST00000379989 MYH15Q9Y2K3 1946 aa8.45□□□□□ -1.06
CDKL5-201ENST00000379989 KCPQ6ZWJ8 1503 aa8.45□□□□□ -1.06
CDKL5-201ENST00000379989 PI4KAP2A4QPH2 592 aa8.45□□□□□ -1.06
CDKL5-201ENST00000379989 RHOXF2BP0C7M4 288 aa8.45□□□□□ -1.06
CDKL5-201ENST00000379989 TPP2P29144 1249 aaPredicted RBP8.45□□□□□ -1.06
CDKL5-201ENST00000379989 PLCB4Q15147 1175 aa8.45□□□□□ -1.06
CDKL5-201ENST00000379989 ACCSLQ4AC99 568 aa8.45□□□□□ -1.06
CDKL5-201ENST00000379989 PPP1R3FQ6ZSY5 799 aaPredicted RBP8.45□□□□□ -1.06
CDKL5-201ENST00000379989 B4GALNT4Q76KP1 1039 aa8.45□□□□□ -1.06
CDKL5-201ENST00000379989 BZW1Q7L1Q6 419 aaKnown RBP8.45□□□□□ -1.06
CDKL5-201ENST00000379989 PI4KAP1Q8N8J0 262 aa8.45□□□□□ -1.06
CDKL5-201ENST00000379989 RHOXF2Q9BQY4 288 aa8.45□□□□□ -1.06
CDKL5-201ENST00000379989 CAPS2Q9BXY5 557 aa8.45□□□□□ -1.06
CDKL5-201ENST00000379989 UTP3Q9NQZ2 479 aaKnown RBP eCLIP8.45□□□□□ -1.06
CDKL5-201ENST00000379989 TPX2Q9ULW0 747 aaKnown RBP8.45□□□□□ -1.06
CDKL5-201ENST00000379989 SMNDC1O75940 238 aaKnown RBP eCLIP8.45□□□□□ -1.06
CDKL5-201ENST00000379989 ALDH1B1P30837 517 aa8.45□□□□□ -1.06
CDKL5-201ENST00000379989 HSPA4P34932 840 aa8.45□□□□□ -1.06
CDKL5-201ENST00000379989 TRIM28Q13263 835 aaKnown RBP8.45□□□□□ -1.06
CDKL5-201ENST00000379989 KIF4BQ2VIQ3 1234 aa8.45□□□□□ -1.06
CDKL5-201ENST00000379989 PRPF40BQ6NWY9 871 aaKnown RBP8.45□□□□□ -1.06
CDKL5-201ENST00000379989 FCHSD1Q86WN1 690 aa8.45□□□□□ -1.06
CDKL5-201ENST00000379989 CNTROBQ8N137 903 aa8.45□□□□□ -1.06
CDKL5-201ENST00000379989 CLASRPQ8N2M8 674 aaKnown RBP8.45□□□□□ -1.06
CDKL5-201ENST00000379989 ACRBPQ8NEB7 543 aa8.45□□□□□ -1.06
CDKL5-201ENST00000379989 SCLT1Q96NL6 688 aa8.45□□□□□ -1.06
CDKL5-201ENST00000379989 YIPF3Q9GZM5 350 aa8.45□□□□□ -1.06
CDKL5-201ENST00000379989 SCAND2PQ9GZW5 306 aaPredicted RBP8.45□□□□□ -1.06
CDKL5-201ENST00000379989 GBP3Q9H0R5 595 aa8.45□□□□□ -1.06
CDKL5-201ENST00000379989 TSPYL2Q9H2G4 693 aaPredicted RBP8.45□□□□□ -1.06
CDKL5-201ENST00000379989 C9orf78Q9NZ63 289 aaPredicted RBP8.45□□□□□ -1.06
CDKL5-201ENST00000379989 RGL1Q9NZL6 768 aa8.45□□□□□ -1.06
CDKL5-201ENST00000379989 HPCAL4Q9UM19 191 aa8.45□□□□□ -1.06
CDKL5-201ENST00000379989 MYL1P05976 194 aa8.45□□□□□ -1.06
CDKL5-201ENST00000379989 CDR1P51861 262 aa8.45□□□□□ -1.06
CDKL5-201ENST00000379989 ZC3H6P61129 1189 aaKnown RBP8.45□□□□□ -1.06
CDKL5-201ENST00000379989 GNGT1P63211 74 aa8.45□□□□□ -1.06
CDKL5-201ENST00000379989 ZBED6P86452 979 aa8.45□□□□□ -1.06
CDKL5-201ENST00000379989 PPFIA1Q13136 1202 aa8.45□□□□□ -1.06
CDKL5-201ENST00000379989 CYB5D1Q6P9G0 228 aa8.45□□□□□ -1.06
CDKL5-201ENST00000379989 SLC30A9Q6PML9 568 aa8.45□□□□□ -1.06
CDKL5-201ENST00000379989 YTHDF3Q7Z739 585 aaKnown RBP8.45□□□□□ -1.06
CDKL5-201ENST00000379989 MFN1Q8IWA4 741 aa8.45□□□□□ -1.06
CDKL5-201ENST00000379989 HOOK2Q96ED9 719 aa8.45□□□□□ -1.06
CDKL5-201ENST00000379989 AFDNP55196 1824 aaKnown RBP8.44□□□□□ -1.06
CDKL5-201ENST00000379989 TPD52L2O43399 206 aaKnown RBP8.44□□□□□ -1.06
CDKL5-201ENST00000379989 ST3GAL1Q11201 340 aa8.44□□□□□ -1.06
CDKL5-201ENST00000379989 RABL6Q3YEC7 729 aaPredicted RBP8.44□□□□□ -1.06
CDKL5-201ENST00000379989 CCDC178Q5BJE1 867 aa8.44□□□□□ -1.06
CDKL5-201ENST00000379989 RHPN1Q8TCX5 695 aa8.44□□□□□ -1.06
CDKL5-201ENST00000379989 CCDC12Q8WUD4 166 aaPredicted RBP8.44□□□□□ -1.06
CDKL5-201ENST00000379989 NUP133Q8WUM0 1156 aa8.44□□□□□ -1.06
CDKL5-201ENST00000379989 IL25Q9H293 177 aa8.44□□□□□ -1.06
CDKL5-201ENST00000379989 SNRKQ9NRH2 765 aa8.44□□□□□ -1.06
CDKL5-201ENST00000379989 ABCC12Q96J65 1359 aa8.44□□□□□ -1.06
CDKL5-201ENST00000379989 PHLPP1O60346 1717 aa8.44□□□□□ -1.06
CDKL5-201ENST00000379989 RBM47A0AV96 593 aaKnown RBP8.44□□□□□ -1.06
CDKL5-201ENST00000379989 PES1O00541 588 aaKnown RBP8.44□□□□□ -1.06
CDKL5-201ENST00000379989 SSBP05455 408 aaKnown RBP eCLIP8.44□□□□□ -1.06
CDKL5-201ENST00000379989 PDIA6Q15084 440 aa8.44□□□□□ -1.06
CDKL5-201ENST00000379989 ME3Q16798 604 aa8.44□□□□□ -1.06
CDKL5-201ENST00000379989 TMEM132AQ24JP5 1023 aa8.44□□□□□ -1.06
CDKL5-201ENST00000379989 FAM81AQ8TBF8 368 aa8.44□□□□□ -1.06
CDKL5-201ENST00000379989 F6X3S4 739 aa8.44□□□□□ -1.06
CDKL5-201ENST00000379989 GGCXP38435 758 aa8.44□□□□□ -1.06
CDKL5-201ENST00000379989 GOLGA8FQ08AF8 430 aa8.44□□□□□ -1.06
CDKL5-201ENST00000379989 GOLGA8DPQ0D2H9 430 aa8.44□□□□□ -1.06
CDKL5-201ENST00000379989 MFSD4BQ5TF39 518 aa8.44□□□□□ -1.06
CDKL5-201ENST00000379989 PPP1R42Q7Z4L9 355 aa8.44□□□□□ -1.06
CDKL5-201ENST00000379989 SPATS2Q86XZ4 545 aaKnown RBP8.44□□□□□ -1.06
CDKL5-201ENST00000379989 TMEM139Q8IV31 216 aa8.44□□□□□ -1.06
CDKL5-201ENST00000379989 CCDC50Q8IVM0 306 aa8.44□□□□□ -1.06
CDKL5-201ENST00000379989 CEP57L1Q8IYX8 460 aa8.44□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms