RNA–Protein interactions for RNA: ENST00000379160.3

PCNA-202, Transcript of proliferating cell nuclear antigen, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PCNA, Length 1,359 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCNA-202ENST00000379160 UBXN2AP68543 259 aa16.8■□□□□ 0.28
PCNA-202ENST00000379160 MAPKAPK5Q8IW41 473 aa16.8■□□□□ 0.28
PCNA-202ENST00000379160 PROCA1Q8NCQ7 364 aaPredicted RBP16.8■□□□□ 0.28
PCNA-202ENST00000379160 SLAIN1Q8ND83 568 aa16.8■□□□□ 0.28
PCNA-202ENST00000379160 CCDC8Q9H0W5 538 aaPredicted RBP16.8■□□□□ 0.28
PCNA-202ENST00000379160 TLR7Q9NYK1 1049 aaKnown RBP16.8■□□□□ 0.28
PCNA-202ENST00000379160 HERC5Q9UII4 1024 aaKnown RBP16.8■□□□□ 0.28
PCNA-202ENST00000379160 PNMA3Q9UL41 463 aa16.8■□□□□ 0.28
PCNA-202ENST00000379160 SIPA1L1O43166 1804 aa16.8■□□□□ 0.28
PCNA-202ENST00000379160 USP17L5A8MUK1 530 aa16.79■□□□□ 0.28
PCNA-202ENST00000379160 ADCY3O60266 1144 aa16.79■□□□□ 0.28
PCNA-202ENST00000379160 GJB1P08034 283 aa16.79■□□□□ 0.28
PCNA-202ENST00000379160 ELNP15502 786 aa16.79■□□□□ 0.28
PCNA-202ENST00000379160 PLCG2P16885 1265 aa16.79■□□□□ 0.28
PCNA-202ENST00000379160 GJA8P48165 433 aa16.79■□□□□ 0.28
PCNA-202ENST00000379160 PSEN1P49768 467 aa16.79■□□□□ 0.28
PCNA-202ENST00000379160 NKX2-3Q8TAU0 364 aa16.79■□□□□ 0.28
PCNA-202ENST00000379160 DHX36Q9H2U1 1008 aaKnown RBP16.79■□□□□ 0.28
PCNA-202ENST00000379160 PIH1D3Q9NQM4 214 aaKnown RBP16.79■□□□□ 0.28
PCNA-202ENST00000379160 DBNLQ9UJU6 430 aaKnown RBP16.79■□□□□ 0.28
PCNA-202ENST00000379160 NOP58Q9Y2X3 529 aaKnown RBP16.79■□□□□ 0.28
PCNA-202ENST00000379160 LOC285556D6RIA3 1793 aa16.79■□□□□ 0.28
PCNA-202ENST00000379160 DOCK3Q8IZD9 2030 aa16.79■□□□□ 0.28
PCNA-202ENST00000379160 FLT1P17948 1338 aa16.78■□□□□ 0.28
PCNA-202ENST00000379160 PPP4CP60510 307 aa16.78■□□□□ 0.28
PCNA-202ENST00000379160 ZNF512BQ96KM6 892 aaPredicted RBP16.78■□□□□ 0.28
PCNA-202ENST00000379160 TBC1D2Q9BYX2 928 aa16.78■□□□□ 0.28
PCNA-202ENST00000379160 UNC93B1Q9H1C4 597 aa16.78■□□□□ 0.28
PCNA-202ENST00000379160 PALD1Q9ULE6 856 aa16.78■□□□□ 0.28
PCNA-202ENST00000379160 FOCADQ5VW36 1801 aa16.78■□□□□ 0.28
PCNA-202ENST00000379160 H0YGN5 161 aa16.77■□□□□ 0.28
PCNA-202ENST00000379160 FAM110CQ1W6H9 321 aa16.77■□□□□ 0.28
PCNA-202ENST00000379160 CRACR2BQ8N4Y2 399 aaPredicted RBP16.77■□□□□ 0.28
PCNA-202ENST00000379160 DPF3Q92784 378 aa16.77■□□□□ 0.28
PCNA-202ENST00000379160 COA7Q96BR5 231 aa16.77■□□□□ 0.28
PCNA-202ENST00000379160 EAF2Q96CJ1 260 aaPredicted RBP16.77■□□□□ 0.28
PCNA-202ENST00000379160 TRIM34Q9BYJ4 488 aa16.77■□□□□ 0.28
PCNA-202ENST00000379160 AS3MTQ9HBK9 375 aa16.77■□□□□ 0.28
PCNA-202ENST00000379160 SAP30BPQ9UHR5 308 aaKnown RBP16.77■□□□□ 0.28
PCNA-202ENST00000379160 COLQQ9Y215 455 aaPredicted RBP16.77■□□□□ 0.28
PCNA-202ENST00000379160 INHAP05111 366 aa16.77■□□□□ 0.27
PCNA-202ENST00000379160 CYP7A1P22680 504 aa16.77■□□□□ 0.27
PCNA-202ENST00000379160 DYNLL1P63167 89 aaKnown RBP16.77■□□□□ 0.27
PCNA-202ENST00000379160 JAG1P78504 1218 aa16.77■□□□□ 0.27
PCNA-202ENST00000379160 PABPC4Q13310 644 aaKnown RBP eCLIP16.77■□□□□ 0.273e-31■■■□□ 16.3
PCNA-202ENST00000379160 MTMR2Q13614 643 aa16.77■□□□□ 0.27
PCNA-202ENST00000379160 SHROOM1Q2M3G4 852 aaPredicted RBP16.77■□□□□ 0.27
PCNA-202ENST00000379160 U2AF1L4Q8WU68 220 aaKnown RBP16.77■□□□□ 0.27
PCNA-202ENST00000379160 ASCC2Q9H1I8 757 aaPredicted RBP16.77■□□□□ 0.27
PCNA-202ENST00000379160 DNAJC18Q9H819 358 aa16.77■□□□□ 0.27
PCNA-202ENST00000379160 NDUFB9Q9Y6M9 179 aa16.77■□□□□ 0.27
PCNA-202ENST00000379160 IDH1O75874 414 aaKnown RBP16.76■□□□□ 0.27
PCNA-202ENST00000379160 GDF11O95390 407 aa16.76■□□□□ 0.27
PCNA-202ENST00000379160 ASNSP08243 561 aa16.76■□□□□ 0.27
PCNA-202ENST00000379160 IRF5Q13568 498 aa16.76■□□□□ 0.27
PCNA-202ENST00000379160 SH3D19Q5HYK7 790 aa16.76■□□□□ 0.27
PCNA-202ENST00000379160 CEP85Q6P2H3 762 aa16.76■□□□□ 0.27
PCNA-202ENST00000379160 FOXP4Q8IVH2 680 aaPredicted RBP16.76■□□□□ 0.27
PCNA-202ENST00000379160 PANK1Q8TE04 598 aa16.76■□□□□ 0.27
PCNA-202ENST00000379160 PXYLP1Q8TE99 480 aa16.76■□□□□ 0.27
PCNA-202ENST00000379160 DCBLD2Q96PD2 775 aa16.76■□□□□ 0.27
PCNA-202ENST00000379160 EXOC6BQ9Y2D4 811 aa16.76■□□□□ 0.27
PCNA-202ENST00000379160 GCLCP48506 637 aaPredicted RBP16.75■□□□□ 0.27
PCNA-202ENST00000379160 DIEXFQ68CQ4 756 aaKnown RBP16.75■□□□□ 0.27
PCNA-202ENST00000379160 MIGA1Q8NAN2 632 aa16.75■□□□□ 0.27
PCNA-202ENST00000379160 WDR18Q9BV38 432 aa16.75■□□□□ 0.27
PCNA-202ENST00000379160 SGPL1O95470 568 aa16.74■□□□□ 0.27
PCNA-202ENST00000379160 HLA-DOAP06340 250 aa16.74■□□□□ 0.27
PCNA-202ENST00000379160 BACE1P56817 501 aa16.74■□□□□ 0.27
PCNA-202ENST00000379160 UBE2Q1Q7Z7E8 422 aa16.74■□□□□ 0.27
PCNA-202ENST00000379160 METTL16Q86W50 562 aaKnown RBP16.74■□□□□ 0.27
PCNA-202ENST00000379160 HS6ST3Q8IZP7 471 aa16.74■□□□□ 0.27
PCNA-202ENST00000379160 MAGEB6Q8N7X4 407 aa16.74■□□□□ 0.27
PCNA-202ENST00000379160 DEFB118Q96PH6 123 aa16.74■□□□□ 0.27
PCNA-202ENST00000379160 ANTXR1Q9H6X2 564 aa16.74■□□□□ 0.27
PCNA-202ENST00000379160 TMOD4Q9NZQ9 345 aa16.74■□□□□ 0.27
PCNA-202ENST00000379160 RANBP2P49792 3224 aaKnown RBP16.73■□□□□ 0.27
PCNA-202ENST00000379160 MYH1P12882 1939 aa16.73■□□□□ 0.27
PCNA-202ENST00000379160 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP16.73■□□□□ 0.27
PCNA-202ENST00000379160 IGSF3O75054 1194 aa16.73■□□□□ 0.27
PCNA-202ENST00000379160 FARP2O94887 1054 aaPredicted RBP16.73■□□□□ 0.27
PCNA-202ENST00000379160 TFRCP02786 760 aaKnown RBP16.73■□□□□ 0.27
PCNA-202ENST00000379160 USP5P45974 858 aa16.73■□□□□ 0.27
PCNA-202ENST00000379160 IRX3P78415 501 aaPredicted RBP16.73■□□□□ 0.27
PCNA-202ENST00000379160 AACSQ86V21 672 aa16.73■□□□□ 0.27
PCNA-202ENST00000379160 ZFP91Q96JP5 570 aaPredicted RBP16.73■□□□□ 0.27
PCNA-202ENST00000379160 HTATIP2Q9BUP3 242 aa16.73■□□□□ 0.27
PCNA-202ENST00000379160 TRIOBPQ9H2D6 2365 aa16.73■□□□□ 0.27
PCNA-202ENST00000379160 USP17L10C9JJH3 530 aa16.72■□□□□ 0.27
PCNA-202ENST00000379160 PEX10O60683 326 aa16.72■□□□□ 0.27
PCNA-202ENST00000379160 FXR1P51114 621 aaKnown RBP eCLIP16.72■□□□□ 0.27
PCNA-202ENST00000379160 ZBTB21Q9ULJ3 1066 aa16.72■□□□□ 0.27
PCNA-202ENST00000379160 ZBED9Q6R2W3 1325 aa16.71■□□□□ 0.27
PCNA-202ENST00000379160 C19orf81C9J6K1 198 aa16.71■□□□□ 0.27
PCNA-202ENST00000379160 MAP3K12Q12852 859 aa16.71■□□□□ 0.27
PCNA-202ENST00000379160 ERC1Q8IUD2 1116 aa16.71■□□□□ 0.27
PCNA-202ENST00000379160 P2RX7Q99572 595 aaKnown RBP16.71■□□□□ 0.27
PCNA-202ENST00000379160 IL1RAPL2Q9NP60 686 aa16.71■□□□□ 0.27
PCNA-202ENST00000379160 PAK6Q9NQU5 681 aaPredicted RBP16.71■□□□□ 0.27
PCNA-202ENST00000379160 APBB1O00213 710 aa16.7■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms