RNA–Protein interactions for RNA: ENST00000379053.4

LINC00654-201, long intergenic non-protein coding RNA 654, humanhuman

TSL 1 (best) BASIC

Gene LINC00654, Length 6,113 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00654-201ENST00000379053 ERCC5P28715 1186 aaPredicted RBP12.19□□□□□ -0.46
LINC00654-201ENST00000379053 RAD51AP2Q09MP3 1159 aa12.19□□□□□ -0.46
LINC00654-201ENST00000379053 CCDC186Q7Z3E2 898 aa12.19□□□□□ -0.46
LINC00654-201ENST00000379053 GSDMBQ8TAX9 411 aa12.19□□□□□ -0.46
LINC00654-201ENST00000379053 JAKMIP2Q96AA8 810 aa12.19□□□□□ -0.46
LINC00654-201ENST00000379053 KCNG1Q9UIX4 513 aa12.19□□□□□ -0.46
LINC00654-201ENST00000379053 LOC102724428A0A0B4J2F2 783 aa12.19□□□□□ -0.46
LINC00654-201ENST00000379053 SMIM23A6NLE4 172 aa12.19□□□□□ -0.46
LINC00654-201ENST00000379053 ATP2C2O75185 946 aa12.19□□□□□ -0.46
LINC00654-201ENST00000379053 FLOT1O75955 427 aa12.19□□□□□ -0.46
LINC00654-201ENST00000379053 SIK1P57059 783 aa12.19□□□□□ -0.46
LINC00654-201ENST00000379053 CCNA1P78396 465 aa12.19□□□□□ -0.46
LINC00654-201ENST00000379053 TPH2Q8IWU9 490 aa12.19□□□□□ -0.46
LINC00654-201ENST00000379053 SEPT12Q8IYM1 358 aa12.19□□□□□ -0.46
LINC00654-201ENST00000379053 ITSN2Q9NZM3 1697 aa12.19□□□□□ -0.46
LINC00654-201ENST00000379053 GYG1P46976 350 aa12.19□□□□□ -0.46
LINC00654-201ENST00000379053 TBC1D8BQ0IIM8 1120 aa12.19□□□□□ -0.46
LINC00654-201ENST00000379053 CFAP157Q5JU67 520 aa12.19□□□□□ -0.46
LINC00654-201ENST00000379053 REXO1Q8N1G1 1221 aaKnown RBP12.19□□□□□ -0.46
LINC00654-201ENST00000379053 GPATCH11Q8N954 259 aa12.19□□□□□ -0.46
LINC00654-201ENST00000379053 HAUS2Q9NVX0 235 aa12.19□□□□□ -0.46
LINC00654-201ENST00000379053 A0A1B0GVL5 298 aa12.19□□□□□ -0.46
LINC00654-201ENST00000379053 ABL1P00519 1130 aa12.19□□□□□ -0.46
LINC00654-201ENST00000379053 CERKLQ49MI3 558 aaPredicted RBP12.19□□□□□ -0.46
LINC00654-201ENST00000379053 SMC6Q96SB8 1091 aa12.19□□□□□ -0.46
LINC00654-201ENST00000379053 NDUFB9Q9Y6M9 179 aa12.19□□□□□ -0.46
LINC00654-201ENST00000379053 GCNT3O95395 438 aa12.19□□□□□ -0.46
LINC00654-201ENST00000379053 P4HA1P13674 534 aa12.19□□□□□ -0.46
LINC00654-201ENST00000379053 GTF2F1P35269 517 aaKnown RBP eCLIP12.19□□□□□ -0.46
LINC00654-201ENST00000379053 TBC1D7Q9P0N9 293 aa12.19□□□□□ -0.46
LINC00654-201ENST00000379053 SLC27A2O14975 620 aa12.18□□□□□ -0.46
LINC00654-201ENST00000379053 KCTD2Q14681 263 aa12.18□□□□□ -0.46
LINC00654-201ENST00000379053 DCUN1D2Q6PH85 259 aa12.18□□□□□ -0.46
LINC00654-201ENST00000379053 GABPB2Q8TAK5 448 aaPredicted RBP12.18□□□□□ -0.46
LINC00654-201ENST00000379053 TTC14Q96N46 770 aa12.18□□□□□ -0.46
LINC00654-201ENST00000379053 ZBTB40Q9NUA8 1239 aa12.18□□□□□ -0.46
LINC00654-201ENST00000379053 TMEM2Q9UHN6 1383 aa12.18□□□□□ -0.46
LINC00654-201ENST00000379053 COL17A1Q9UMD9 1497 aaPredicted RBP12.18□□□□□ -0.46
LINC00654-201ENST00000379053 AFF2P51816 1311 aa12.18□□□□□ -0.46
LINC00654-201ENST00000379053 YARSP54577 528 aaKnown RBP12.18□□□□□ -0.46
LINC00654-201ENST00000379053 TYRO3Q06418 890 aa12.18□□□□□ -0.46
LINC00654-201ENST00000379053 PPP2R5BQ15173 497 aa12.18□□□□□ -0.46
LINC00654-201ENST00000379053 CCDC6Q16204 474 aa12.18□□□□□ -0.46
LINC00654-201ENST00000379053 DYMQ7RTS9 669 aa12.18□□□□□ -0.46
LINC00654-201ENST00000379053 MRPL44Q9H9J2 332 aaKnown RBP12.18□□□□□ -0.46
LINC00654-201ENST00000379053 NCOA5Q9HCD5 579 aaKnown RBP12.18□□□□□ -0.46
LINC00654-201ENST00000379053 PFDN4Q9NQP4 134 aa12.18□□□□□ -0.46
LINC00654-201ENST00000379053 MAPK8IP1Q9UQF2 711 aa12.18□□□□□ -0.46
LINC00654-201ENST00000379053 TMEM94Q12767 1356 aa12.18□□□□□ -0.46
LINC00654-201ENST00000379053 PHKG2P15735 406 aa12.18□□□□□ -0.46
LINC00654-201ENST00000379053 PPP2R5DQ14738 602 aa12.18□□□□□ -0.46
LINC00654-201ENST00000379053 ZBTB8OSQ8IWT0 167 aa12.18□□□□□ -0.46
LINC00654-201ENST00000379053 SELENOSQ9BQE4 189 aa12.18□□□□□ -0.46
LINC00654-201ENST00000379053 STIM2Q9P246 746 aa12.18□□□□□ -0.46
LINC00654-201ENST00000379053 TNNI1P19237 187 aa12.18□□□□□ -0.46
LINC00654-201ENST00000379053 UAP1Q16222 522 aaPredicted RBP12.18□□□□□ -0.46
LINC00654-201ENST00000379053 FAM182BQ5T319 152 aa12.18□□□□□ -0.46
LINC00654-201ENST00000379053 UNC5CLQ8IV45 518 aa12.18□□□□□ -0.46
LINC00654-201ENST00000379053 MRPL11Q9Y3B7 192 aaKnown RBP12.18□□□□□ -0.46
LINC00654-201ENST00000379053 TTLL3Q9Y4R7 772 aa12.18□□□□□ -0.46
LINC00654-201ENST00000379053 CD2APQ9Y5K6 639 aa12.18□□□□□ -0.46
LINC00654-201ENST00000379053 USP17L12C9JPN9 530 aa12.18□□□□□ -0.46
LINC00654-201ENST00000379053 USP17L21D6R901 530 aa12.18□□□□□ -0.46
LINC00654-201ENST00000379053 PPEF1O14829 653 aaPredicted RBP12.18□□□□□ -0.46
LINC00654-201ENST00000379053 ICA1Q05084 483 aa12.18□□□□□ -0.46
LINC00654-201ENST00000379053 SUPT20HL1Q3ZLR7 823 aa12.18□□□□□ -0.46
LINC00654-201ENST00000379053 LZTFL1Q9NQ48 299 aa12.18□□□□□ -0.46
LINC00654-201ENST00000379053 RLBP1P12271 317 aa12.17□□□□□ -0.46
LINC00654-201ENST00000379053 ATL3Q6DD88 541 aa12.17□□□□□ -0.46
LINC00654-201ENST00000379053 CSGALNACT2Q8N6G5 542 aa12.17□□□□□ -0.46
LINC00654-201ENST00000379053 TLDC2A0PJX2 215 aa12.17□□□□□ -0.46
LINC00654-201ENST00000379053 PPARAQ07869 468 aa12.17□□□□□ -0.46
LINC00654-201ENST00000379053 UTP14CQ5TAP6 766 aaKnown RBP12.17□□□□□ -0.46
LINC00654-201ENST00000379053 FAM227BQ96M60 508 aa12.17□□□□□ -0.46
LINC00654-201ENST00000379053 ADPGKQ9BRR6 497 aa12.17□□□□□ -0.46
LINC00654-201ENST00000379053 PAXBP1Q9Y5B6 917 aa12.17□□□□□ -0.46
LINC00654-201ENST00000379053 hCG_1642624A0A1W2PR95 340 aa12.17□□□□□ -0.46
LINC00654-201ENST00000379053 BTDP43251 543 aa12.17□□□□□ -0.46
LINC00654-201ENST00000379053 EIF4A1P60842 406 aaKnown RBP12.17□□□□□ -0.46
LINC00654-201ENST00000379053 TNNC1P63316 161 aa12.17□□□□□ -0.46
LINC00654-201ENST00000379053 KARSQ15046 597 aaKnown RBP12.17□□□□□ -0.46
LINC00654-201ENST00000379053 MED10Q9BTT4 135 aa12.17□□□□□ -0.46
LINC00654-201ENST00000379053 TSPYL2Q9H2G4 693 aaPredicted RBP12.17□□□□□ -0.46
LINC00654-201ENST00000379053 IFNKQ9P0W0 207 aa12.17□□□□□ -0.46
LINC00654-201ENST00000379053 STK25O00506 426 aa12.17□□□□□ -0.46
LINC00654-201ENST00000379053 CHL1O00533 1208 aa12.17□□□□□ -0.46
LINC00654-201ENST00000379053 ANO1Q5XXA6 986 aa12.17□□□□□ -0.46
LINC00654-201ENST00000379053 CNGA4Q8IV77 575 aa12.17□□□□□ -0.46
LINC00654-201ENST00000379053 TBC1D31Q96DN5 1066 aa12.17□□□□□ -0.46
LINC00654-201ENST00000379053 SUGCTQ9HAC7 445 aa12.17□□□□□ -0.46
LINC00654-201ENST00000379053 CLRN2A0PK11 232 aa12.17□□□□□ -0.46
LINC00654-201ENST00000379053 POLR2MP0CAP2 368 aa12.17□□□□□ -0.46
LINC00654-201ENST00000379053 FAM102BQ5T8I3 360 aa12.17□□□□□ -0.46
LINC00654-201ENST00000379053 MCF2L2Q86YR7 1114 aa12.17□□□□□ -0.46
LINC00654-201ENST00000379053 IFT81Q8WYA0 676 aa12.17□□□□□ -0.46
LINC00654-201ENST00000379053 LBHD1Q9BQE6 289 aaPredicted RBP12.17□□□□□ -0.46
LINC00654-201ENST00000379053 KCNH3Q9ULD8 1083 aa12.17□□□□□ -0.46
LINC00654-201ENST00000379053 NELFCDQ8IXH7 590 aa12.16□□□□□ -0.46
LINC00654-201ENST00000379053 ANAPC4Q9UJX5 808 aa12.16□□□□□ -0.46
LINC00654-201ENST00000379053 SMCO2A6NFE2 343 aa12.16□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms