RNA–Protein interactions for RNA: ENST00000378505.6

RPGR-203, Transcript of retinitis pigmentosa GTPase regulator, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene RPGR, Length 4,767 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPGR-203ENST00000378505 ARPP21Q9UBL0 812 aaPredicted RBP12.64□□□□□ -0.39
RPGR-203ENST00000378505 NLRP1Q9C000 1473 aa12.64□□□□□ -0.39
RPGR-203ENST00000378505 EBAG9O00559 213 aa12.64□□□□□ -0.39
RPGR-203ENST00000378505 EPB41P11171 864 aaKnown RBP12.64□□□□□ -0.39
RPGR-203ENST00000378505 STMN4Q9H169 189 aaPredicted RBP12.64□□□□□ -0.39
RPGR-203ENST00000378505 IGSF3O75054 1194 aa12.64□□□□□ -0.39
RPGR-203ENST00000378505 MAPK8IP2Q13387 824 aaPredicted RBP12.64□□□□□ -0.39
RPGR-203ENST00000378505 SNX29Q8TEQ0 813 aa12.64□□□□□ -0.39
RPGR-203ENST00000378505 SH2D4AQ9H788 454 aa12.64□□□□□ -0.39
RPGR-203ENST00000378505 IKBKGQ9Y6K9 419 aa12.64□□□□□ -0.39
RPGR-203ENST00000378505 ADCY7P51828 1080 aa12.63□□□□□ -0.39
RPGR-203ENST00000378505 POLA2Q14181 598 aa12.63□□□□□ -0.39
RPGR-203ENST00000378505 TRIML1Q8N9V2 468 aa12.63□□□□□ -0.39
RPGR-203ENST00000378505 SYNCQ9H7C4 482 aa12.63□□□□□ -0.39
RPGR-203ENST00000378505 RTEL1Q9NZ71 1219 aa12.63□□□□□ -0.39
RPGR-203ENST00000378505 MAP3K15Q6ZN16 1313 aa12.63□□□□□ -0.39
RPGR-203ENST00000378505 TBC1D22AQ8WUA7 517 aa12.63□□□□□ -0.39
RPGR-203ENST00000378505 JAKMIP2Q96AA8 810 aa12.63□□□□□ -0.39
RPGR-203ENST00000378505 FERMT1Q9BQL6 677 aa12.63□□□□□ -0.39
RPGR-203ENST00000378505 FRMD4BQ9Y2L6 1034 aa12.63□□□□□ -0.39
RPGR-203ENST00000378505 BTBD18B2RXH4 712 aa12.63□□□□□ -0.39
RPGR-203ENST00000378505 EIF6P56537 245 aaKnown RBP12.63□□□□□ -0.39
RPGR-203ENST00000378505 HERC4Q5GLZ8 1057 aaPredicted RBP12.63□□□□□ -0.39
RPGR-203ENST00000378505 REXO1Q8N1G1 1221 aaKnown RBP12.63□□□□□ -0.39
RPGR-203ENST00000378505 NELFBQ8WX92 580 aa12.63□□□□□ -0.39
RPGR-203ENST00000378505 CCDC51Q96ER9 411 aa12.63□□□□□ -0.39
RPGR-203ENST00000378505 SHROOM2Q13796 1616 aa12.62□□□□□ -0.39
RPGR-203ENST00000378505 LRMPQ12912 555 aa12.62□□□□□ -0.39
RPGR-203ENST00000378505 MAPKAPK5Q8IW41 473 aa12.62□□□□□ -0.39
RPGR-203ENST00000378505 PUS3Q9BZE2 481 aaKnown RBP12.62□□□□□ -0.39
RPGR-203ENST00000378505 NSRP1Q9H0G5 558 aaKnown RBP12.62□□□□□ -0.39
RPGR-203ENST00000378505 TNKSO95271 1327 aa12.62□□□□□ -0.39
RPGR-203ENST00000378505 TET3O43151 1660 aa12.62□□□□□ -0.39
RPGR-203ENST00000378505 MAGEA1P43355 309 aa12.62□□□□□ -0.39
RPGR-203ENST00000378505 FAM47AQ5JRC9 791 aa12.62□□□□□ -0.39
RPGR-203ENST00000378505 ZNF589Q86UQ0 364 aaPredicted RBP12.62□□□□□ -0.39
RPGR-203ENST00000378505 CABP7Q86V35 215 aa12.62□□□□□ -0.39
RPGR-203ENST00000378505 FCHSD1Q86WN1 690 aa12.62□□□□□ -0.39
RPGR-203ENST00000378505 WWC3Q9ULE0 1092 aa12.62□□□□□ -0.39
RPGR-203ENST00000378505 A0A1W2PRG0 241 aa12.62□□□□□ -0.39
RPGR-203ENST00000378505 SLC9C1Q4G0N8 1177 aa12.62□□□□□ -0.39
RPGR-203ENST00000378505 SMAP1Q8IYB5 467 aaPredicted RBP12.62□□□□□ -0.39
RPGR-203ENST00000378505 ZSCAN10Q96SZ4 725 aaPredicted RBP12.62□□□□□ -0.39
RPGR-203ENST00000378505 SLC1A4P43007 532 aa12.62□□□□□ -0.39
RPGR-203ENST00000378505 GRIPAP1Q4V328 841 aa12.62□□□□□ -0.39
RPGR-203ENST00000378505 KRBA2Q6ZNG9 492 aa12.62□□□□□ -0.39
RPGR-203ENST00000378505 RGS22Q8NE09 1264 aa12.62□□□□□ -0.39
RPGR-203ENST00000378505 FAM76AQ8TAV0 307 aa12.62□□□□□ -0.39
RPGR-203ENST00000378505 MTRF1LQ9UGC7 380 aaKnown RBP12.62□□□□□ -0.39
RPGR-203ENST00000378505 LMTK3Q96Q04 1460 aa12.62□□□□□ -0.39
RPGR-203ENST00000378505 B4DLN1 442 aa12.61□□□□□ -0.39
RPGR-203ENST00000378505 ATP2A1O14983 1001 aa12.61□□□□□ -0.39
RPGR-203ENST00000378505 BCAMP50895 628 aa12.61□□□□□ -0.39
RPGR-203ENST00000378505 NDUFA8P51970 172 aa12.61□□□□□ -0.39
RPGR-203ENST00000378505 NSUN7Q8NE18 718 aaKnown RBP12.61□□□□□ -0.39
RPGR-203ENST00000378505 GREM2Q9H772 168 aa12.61□□□□□ -0.39
RPGR-203ENST00000378505 HOMER2Q9NSB8 354 aa12.61□□□□□ -0.39
RPGR-203ENST00000378505 ATG3Q9NT62 314 aa12.61□□□□□ -0.39
RPGR-203ENST00000378505 MTUS1Q9ULD2 1270 aa12.61□□□□□ -0.39
RPGR-203ENST00000378505 IQGAP3Q86VI3 1631 aa12.61□□□□□ -0.39
RPGR-203ENST00000378505 PHKA1P46020 1223 aa12.61□□□□□ -0.39
RPGR-203ENST00000378505 CALCRLQ16602 461 aa12.61□□□□□ -0.39
RPGR-203ENST00000378505 TDRD7Q8NHU6 1098 aaKnown RBP12.61□□□□□ -0.39
RPGR-203ENST00000378505 TGFBRAP1Q8WUH2 860 aa12.61□□□□□ -0.39
RPGR-203ENST00000378505 SECISBP2LQ93073 1101 aaKnown RBP12.61□□□□□ -0.39
RPGR-203ENST00000378505 ZFP91Q96JP5 570 aaPredicted RBP12.61□□□□□ -0.39
RPGR-203ENST00000378505 ATP6V0A2Q9Y487 856 aa12.61□□□□□ -0.39
RPGR-203ENST00000378505 ADCY10Q96PN6 1610 aa12.61□□□□□ -0.39
RPGR-203ENST00000378505 SLF1Q9BQI6 1058 aa12.61□□□□□ -0.39
RPGR-203ENST00000378505 BCL2L12Q9HB09 334 aa12.61□□□□□ -0.39
RPGR-203ENST00000378505 UTP18Q9Y5J1 556 aaKnown RBP eCLIP12.61□□□□□ -0.39
RPGR-203ENST00000378505 STK24Q9Y6E0 443 aa12.61□□□□□ -0.39
RPGR-203ENST00000378505 TMEM110-MUSTN1A8MSY1 372 aa12.61□□□□□ -0.39
RPGR-203ENST00000378505 ADORA1P30542 326 aa12.61□□□□□ -0.39
RPGR-203ENST00000378505 GYG1P46976 350 aa12.61□□□□□ -0.39
RPGR-203ENST00000378505 ETF1P62495 437 aaKnown RBP12.61□□□□□ -0.39
RPGR-203ENST00000378505 SLC39A14Q15043 492 aa12.61□□□□□ -0.39
RPGR-203ENST00000378505 CCDC26Q8TAB7 109 aa12.61□□□□□ -0.39
RPGR-203ENST00000378505 NOX5Q96PH1 765 aa12.61□□□□□ -0.39
RPGR-203ENST00000378505 BLZF1Q9H2G9 400 aa12.61□□□□□ -0.39
RPGR-203ENST00000378505 ERBB3P21860 1342 aa12.61□□□□□ -0.39
RPGR-203ENST00000378505 MED23Q9ULK4 1368 aa12.61□□□□□ -0.39
RPGR-203ENST00000378505 PCP11498 1178 aaKnown RBP12.6□□□□□ -0.39
RPGR-203ENST00000378505 PTPN12Q05209 780 aaKnown RBP12.6□□□□□ -0.39
RPGR-203ENST00000378505 PLS1Q14651 629 aa12.6□□□□□ -0.39
RPGR-203ENST00000378505 LRRC8AQ8IWT6 810 aa12.6□□□□□ -0.39
RPGR-203ENST00000378505 BLIDQ8IZY5 108 aa12.6□□□□□ -0.39
RPGR-203ENST00000378505 CCDC24Q8N4L8 307 aa12.6□□□□□ -0.39
RPGR-203ENST00000378505 PI4K2BQ8TCG2 481 aa12.6□□□□□ -0.39
RPGR-203ENST00000378505 SDR42E1Q8WUS8 393 aa12.6□□□□□ -0.39
RPGR-203ENST00000378505 JDP2Q8WYK2 163 aa12.6□□□□□ -0.39
RPGR-203ENST00000378505 IQCDQ96DY2 449 aa12.6□□□□□ -0.39
RPGR-203ENST00000378505 RCOR1Q9UKL0 485 aa12.6□□□□□ -0.39
RPGR-203ENST00000378505 ARHGAP31Q2M1Z3 1444 aa12.6□□□□□ -0.39
RPGR-203ENST00000378505 TRPM1Q7Z4N2 1603 aa12.6□□□□□ -0.39
RPGR-203ENST00000378505 PRAMEF22A3QJZ6 481 aa12.6□□□□□ -0.39
RPGR-203ENST00000378505 ZEB2O60315 1214 aa12.6□□□□□ -0.39
RPGR-203ENST00000378505 EEF2P13639 858 aaKnown RBP12.6□□□□□ -0.39
RPGR-203ENST00000378505 C8orf74Q6P047 294 aa12.6□□□□□ -0.39
RPGR-203ENST00000378505 OR8K1Q8NGG5 319 aa12.6□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms