RNA–Protein interactions for RNA: ENST00000378407.7

CCDC107-203, Transcript of coiled-coil domain containing 107, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene CCDC107, Length 899 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC107-203ENST00000378407 GCLCP48506 637 aaPredicted RBP27.09■■□□□ 1.93
CCDC107-203ENST00000378407 UBXN2AP68543 259 aa27.09■■□□□ 1.93
CCDC107-203ENST00000378407 FAM110CQ1W6H9 321 aa27.09■■□□□ 1.93
CCDC107-203ENST00000378407 METTL16Q86W50 562 aaKnown RBP27.09■■□□□ 1.93
CCDC107-203ENST00000378407 SLAIN1Q8ND83 568 aa27.09■■□□□ 1.93
CCDC107-203ENST00000378407 WDR18Q9BV38 432 aa27.09■■□□□ 1.93
CCDC107-203ENST00000378407 PDE6AP16499 860 aa27.08■■□□□ 1.93
CCDC107-203ENST00000378407 BACE1P56817 501 aa27.08■■□□□ 1.93
CCDC107-203ENST00000378407 PDE3AQ14432 1141 aa27.08■■□□□ 1.93
CCDC107-203ENST00000378407 SH3D19Q5HYK7 790 aa27.08■■□□□ 1.93
CCDC107-203ENST00000378407 TTC6Q86TZ1 520 aa27.08■■□□□ 1.93
CCDC107-203ENST00000378407 PPIL4Q8WUA2 492 aaKnown RBP eCLIP27.08■■□□□ 1.93
CCDC107-203ENST00000378407 COA7Q96BR5 231 aa27.08■■□□□ 1.93
CCDC107-203ENST00000378407 ASCC2Q9H1I8 757 aaPredicted RBP27.08■■□□□ 1.93
CCDC107-203ENST00000378407 SERPINB13Q9UIV8 391 aa27.08■■□□□ 1.93
CCDC107-203ENST00000378407 GABRQQ9UN88 632 aa27.08■■□□□ 1.93
CCDC107-203ENST00000378407 SHROOM1Q2M3G4 852 aaPredicted RBP27.07■■□□□ 1.92
CCDC107-203ENST00000378407 C20orf194Q5TEA3 1177 aa27.07■■□□□ 1.92
CCDC107-203ENST00000378407 CRNKL1Q9BZJ0 848 aaKnown RBP27.07■■□□□ 1.92
CCDC107-203ENST00000378407 USP17L10C9JJH3 530 aa27.06■■□□□ 1.92
CCDC107-203ENST00000378407 FLT3LGP49771 235 aa27.06■■□□□ 1.92
CCDC107-203ENST00000378407 MTFR1Q15390 333 aa27.06■■□□□ 1.92
CCDC107-203ENST00000378407 FEZ1Q99689 392 aa27.06■■□□□ 1.92
CCDC107-203ENST00000378407 MGAMO43451 1857 aa27.05■■□□□ 1.92
CCDC107-203ENST00000378407 C19orf81C9J6K1 198 aa27.05■■□□□ 1.92
CCDC107-203ENST00000378407 ADCY3O60266 1144 aa27.05■■□□□ 1.92
CCDC107-203ENST00000378407 GH2P01242 217 aa27.05■■□□□ 1.92
CCDC107-203ENST00000378407 POLR3DP05423 398 aaPredicted RBP27.05■■□□□ 1.92
CCDC107-203ENST00000378407 JAG1P78504 1218 aa27.05■■□□□ 1.92
CCDC107-203ENST00000378407 RIOK1Q9BRS2 568 aaKnown RBP27.05■■□□□ 1.92
CCDC107-203ENST00000378407 EHD4Q9H223 541 aa27.05■■□□□ 1.92
CCDC107-203ENST00000378407 ZNF532Q9HCE3 1301 aa27.05■■□□□ 1.92
CCDC107-203ENST00000378407 KIAA0100Q14667 2235 aaKnown RBP27.05■■□□□ 1.92
CCDC107-203ENST00000378407 MKI67P46013 3256 aaKnown RBP27.05■■□□□ 1.92
CCDC107-203ENST00000378407 CCL5P13501 91 aa27.04■■□□□ 1.92
CCDC107-203ENST00000378407 LRRCC1Q9C099 1032 aa27.04■■□□□ 1.92
CCDC107-203ENST00000378407 RNF208Q9H0X6 261 aa27.04■■□□□ 1.92
CCDC107-203ENST00000378407 BOLA2Q9H3K6 86 aa27.04■■□□□ 1.92
CCDC107-203ENST00000378407 PAG1Q9NWQ8 432 aa27.04■■□□□ 1.92
CCDC107-203ENST00000378407 MYH1P12882 1939 aa27.04■■□□□ 1.92
CCDC107-203ENST00000378407 RAB3GAP1Q15042 981 aa27.03■■□□□ 1.92
CCDC107-203ENST00000378407 NKX2-3Q8TAU0 364 aa27.03■■□□□ 1.92
CCDC107-203ENST00000378407 DDX24Q9GZR7 859 aaKnown RBP eCLIP27.03■■□□□ 1.92
CCDC107-203ENST00000378407 ELNP15502 786 aa27.02■■□□□ 1.92
CCDC107-203ENST00000378407 CERKLQ49MI3 558 aaPredicted RBP27.02■■□□□ 1.92
CCDC107-203ENST00000378407 EDC3Q96F86 508 aaKnown RBP27.02■■□□□ 1.92
CCDC107-203ENST00000378407 CABP5Q9NP86 173 aa27.02■■□□□ 1.92
CCDC107-203ENST00000378407 NAV1Q8NEY1 1877 aa27.02■■□□□ 1.92
CCDC107-203ENST00000378407 ZYXQ15942 572 aaKnown RBP27.01■■□□□ 1.91
CCDC107-203ENST00000378407 ABCB5Q2M3G0 1257 aa27.01■■□□□ 1.91
CCDC107-203ENST00000378407 USP17L2Q6R6M4 530 aa27.01■■□□□ 1.91
CCDC107-203ENST00000378407 MCM9Q9NXL9 1143 aa27.01■■□□□ 1.91
CCDC107-203ENST00000378407 INHAP05111 366 aa27■■□□□ 1.91
CCDC107-203ENST00000378407 ATP5JP18859 108 aa27■■□□□ 1.91
CCDC107-203ENST00000378407 IRF5Q13568 498 aa27■■□□□ 1.91
CCDC107-203ENST00000378407 TATDN1Q6P1N9 297 aa27■■□□□ 1.91
CCDC107-203ENST00000378407 PLCD1P51178 756 aa26.99■■□□□ 1.91
CCDC107-203ENST00000378407 HERVK_113P62684 666 aa26.99■■□□□ 1.91
CCDC107-203ENST00000378407 CCAR1Q8IX12 1150 aaKnown RBP26.99■■□□□ 1.91
CCDC107-203ENST00000378407 LCORLQ8N3X6 602 aa26.99■■□□□ 1.91
CCDC107-203ENST00000378407 PXYLP1Q8TE99 480 aa26.99■■□□□ 1.91
CCDC107-203ENST00000378407 SDR42E1Q8WUS8 393 aa26.99■■□□□ 1.91
CCDC107-203ENST00000378407 GCC1Q96CN9 775 aa26.99■■□□□ 1.91
CCDC107-203ENST00000378407 SLC34A2O95436 690 aa26.98■■□□□ 1.91
CCDC107-203ENST00000378407 GJB1P08034 283 aa26.98■■□□□ 1.91
CCDC107-203ENST00000378407 HOXA7P31268 230 aaPredicted RBP26.98■■□□□ 1.91
CCDC107-203ENST00000378407 HAUS7Q99871 368 aa26.98■■□□□ 1.91
CCDC107-203ENST00000378407 UNC93B1Q9H1C4 597 aa26.98■■□□□ 1.91
CCDC107-203ENST00000378407 DDX60LQ5H9U9 1706 aaKnown RBP26.97■■□□□ 1.91
CCDC107-203ENST00000378407 TCRBV5S4A2TA0A5A2 114 aa26.97■■□□□ 1.91
CCDC107-203ENST00000378407 MPHOSPH10O00566 681 aaKnown RBP26.97■■□□□ 1.91
CCDC107-203ENST00000378407 SMARCA5O60264 1052 aaPredicted RBP26.97■■□□□ 1.91
CCDC107-203ENST00000378407 MBD4O95243 580 aa26.97■■□□□ 1.91
CCDC107-203ENST00000378407 GJA8P48165 433 aa26.97■■□□□ 1.91
CCDC107-203ENST00000378407 SHISA4Q96DD7 197 aa26.97■■□□□ 1.91
CCDC107-203ENST00000378407 P2RX7Q99572 595 aaKnown RBP26.97■■□□□ 1.91
CCDC107-203ENST00000378407 ARMT1Q9H993 441 aa26.97■■□□□ 1.91
CCDC107-203ENST00000378407 MORF4L1Q9UBU8 362 aa26.97■■□□□ 1.91
CCDC107-203ENST00000378407 USP14P54578 494 aa26.96■■□□□ 1.91
CCDC107-203ENST00000378407 AMOTL1Q8IY63 956 aa26.96■■□□□ 1.91
CCDC107-203ENST00000378407 GPRC5AQ8NFJ5 357 aa26.96■■□□□ 1.91
CCDC107-203ENST00000378407 GTF3C2Q8WUA4 911 aaPredicted RBP26.96■■□□□ 1.91
CCDC107-203ENST00000378407 DDRGK1Q96HY6 314 aa26.96■■□□□ 1.91
CCDC107-203ENST00000378407 GPATCH3Q96I76 525 aa26.96■■□□□ 1.91
CCDC107-203ENST00000378407 PAGR1Q9BTK6 254 aa26.96■■□□□ 1.91
CCDC107-203ENST00000378407 CWC22Q9HCG8 908 aaKnown RBP26.96■■□□□ 1.91
CCDC107-203ENST00000378407 SHMT1P34896 483 aa26.95■■□□□ 1.9
CCDC107-203ENST00000378407 ADD2P35612 726 aa26.95■■□□□ 1.9
CCDC107-203ENST00000378407 EMILIN3Q9NT22 766 aa26.95■■□□□ 1.9
CCDC107-203ENST00000378407 ZSCAN25Q6NSZ9 544 aa26.94■■□□□ 1.9
CCDC107-203ENST00000378407 U2AF1L4Q8WU68 220 aaKnown RBP26.94■■□□□ 1.9
CCDC107-203ENST00000378407 DCP1AQ9NPI6 582 aaPredicted RBP26.94■■□□□ 1.9
CCDC107-203ENST00000378407 USP17L15C9J2P7 530 aa26.92■■□□□ 1.9
CCDC107-203ENST00000378407 USP17L13C9JLJ4 530 aa26.92■■□□□ 1.9
CCDC107-203ENST00000378407 USP17L11C9JVI0 530 aa26.92■■□□□ 1.9
CCDC107-203ENST00000378407 USP17L18D6R9N7 530 aa26.92■■□□□ 1.9
CCDC107-203ENST00000378407 USP17L22D6RA61 530 aa26.92■■□□□ 1.9
CCDC107-203ENST00000378407 USP17L17D6RBQ6 530 aa26.92■■□□□ 1.9
CCDC107-203ENST00000378407 USP17L19D6RCP7 530 aa26.92■■□□□ 1.9
CCDC107-203ENST00000378407 USP17L20D6RJB6 530 aa26.92■■□□□ 1.9
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms